Perognathus longimembris pacificus (Pacific pocket mouse): 125351743
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Entry
125351743 CDS
T08928
Symbol
Gtf2e1
Name
(RefSeq) general transcription factor IIE subunit 1
KO
K03136
transcription initiation factor TFIIE subunit alpha
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop03022
Basal transcription factors
plop05203
Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
125351743 (Gtf2e1)
09160 Human Diseases
09161 Cancer: overview
05203 Viral carcinogenesis
125351743 (Gtf2e1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
plop03021
]
125351743 (Gtf2e1)
Transcription machinery [BR:
plop03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIE
125351743 (Gtf2e1)
Prokaryotic type
Archaeal type
TFE
125351743 (Gtf2e1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIE_alpha
TFIIE-A_C
Zn_Ribbon_TF
Cas12f1-like_TNB
DUF7385
zf-H2C2_2
Zf-C2H2_ZNF451_C
Zn_ribbon_PaaD
Motif
Other DBs
NCBI-GeneID:
125351743
NCBI-ProteinID:
XP_048202673
LinkDB
All DBs
Position
5:46981745..47016609
Genome browser
AA seq
439 aa
AA seq
DB search
MADPDVLTEVPAALKRLAKYVIRGFYGIEHVLALDILIRNPCVKEEDMLELLKFDRKQLR
SVLNNLKGDKFIKCRMRVETAADGKTTRHNYYFINYRTLVNVVKYKLDHMRRRIETDERD
STNRASFKCPVCSSTFTDLEANQLFDPMTGTFHCTFCHTEVEEDESAMPKKDARTLLARF
NEQIEPIYALLRETEDVNLAYEILEPEPTEIPALKQSKDRAATTAGAAGLAGGHHREAWA
SKGPSYEDLYTQNVVINMDDQEDVHRASLEGKPAKERPIWLRESTVQGAYGSEDMKEGGI
NMDTFQEREDGRTGPDDNEEVMRALLIHEKKTTSVTAGSMGTAAPVTAANGSDSESETSE
SDDDSPPRPAAVTARHREEDEDEDDEFEEVADDPTVTVAGRPFSYSEVSQRPELVTQMTP
EEKEAYIAMGQRMFEDLFE
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atggcagatccagatgtcctcaccgaggttccagcagcattgaagaggttagccaagtat
gtgatccgggggttttatggcattgaacatgtgttggccttggacatcttgatccggaat
ccctgcgtgaaagaagaagatatgctggagctgctcaagtttgatcggaagcaacttcga
tccgttttgaataatttaaagggagacaagttcatcaagtgcagaatgagggtagagact
gctgcagatggcaaaaccactcgtcataactactattttatcaattatcgtactcttgtt
aatgtcgtcaagtacaaattggaccacatgagaaggaggattgaaacggatgagagagat
tctaccaaccgggcttcctttaaatgtcctgtctgtagtagtacttttacagacttagaa
gctaatcagctctttgatcctatgacaggaactttccactgtactttttgccatacagag
gtagaagaggatgaatcagcaatgcccaaaaaagatgcacgcacacttttggcaaggttt
aatgaacaaattgagcccatttatgcattgcttcgggagacagaagatgtgaacttggcc
tatgaaatacttgagccagaacccacagaaatcccagccctgaaacagagcaaagatcga
gcagcaactactgcgggagctgctggcctggcaggggggcaccaccgggaagcatgggcc
agcaagggcccctcctatgaggacttatacacacaaaatgttgtcattaacatggacgac
caagaagatgttcatcgagcctcactggaaggaaaacctgccaaggagaggcccatttgg
ttgagagagagcactgtccaaggggcgtatggttctgaggacatgaaggaaggtggcata
aatatggacacattccaggagcgggaggatggccggacggggcctgatgataatgaggag
gtcatgcgagcactcctcattcatgagaagaagaccacctctgtcacagctggctccatg
gggacagcggctcctgtgactgctgccaatggcagtgactcagagagtgagaccagcgag
tcagatgacgactctccacctcgacctgctgctgtgactgcccgtcaccgggaagaagat
gaagacgaagatgatgagtttgaggaagtagcagatgacccgactgtcacagtggctggc
cgtcccttctcctatagtgaagtgagccagcggccagagctggtgacccagatgacacca
gaagaaaaagaagcgtacatagcaatgggacagcgcatgtttgaggacctctttgagtga
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