Perognathus longimembris pacificus (Pacific pocket mouse): 125351750
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Entry
125351750 CDS
T08928
Symbol
Fbxo40
Name
(RefSeq) F-box only protein 40
KO
K10315
F-box protein 40
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
plop04121
]
125351750 (Fbxo40)
Ubiquitin system [BR:
plop04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
125351750 (Fbxo40)
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Gene cluster
GFIT
Motif
Pfam:
F-box_4
zf-TRAF_2
F-box
F-box-like
GHL5
Motif
Other DBs
NCBI-GeneID:
125351750
NCBI-ProteinID:
XP_048202685
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Position
5:47395033..47422883
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AA seq
707 aa
AA seq
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MGRAHRPPPGQHRHCEGCINRHCHVPVEPSISCLVINCRLLCGATFHMCKEAEHELLCPL
EQVPCLNSEYGCPLSMSRHKLAKHLQICPASVVCCSMEWNRWPNIDSETILHENIMKENP
SEECLDTALALQDQNVLFRSLKMVELFPETRDTTEEEPMTGEASWEEMGGAVGGMDVSSV
PHGCLSVTNGEMVELSQEEREMLAKTKEGMDLVKFGKWENMFSKEHAASALTGSAGMCET
KSRHGAGKDQCSGGDDPTDTNVATSGTAPQEDQRQKEFAAAMEMTGLAPWQDGVLERLKT
AVDPKDYNMYLVHNGRMLIHFGQMPACTPKERDFVYGNLEAQEVKTVYTFKVPVSYCGKR
ARLGDAMLRCRPSEHKAVDTSDLGVTVEDLPKSDLIKTTLQCALERELKGHIISESRSID
GLFMDFATQTYNFEPEQFSSGTVLADLLNTGNPGGLHVELHSECVTRRHNKSSSAFTFTC
NKFFRRDEFPLHFKNVHTDIQSCLNGWFQHRCPLAYLGCTFVQNHFRPPGQKAKVIYSQE
LKTFAIKPEVAPELNEGKNNHLLGGRKSQNCLTSLPLEVLQYIAGFLDSISLSQLSQVSV
LMKNICATLLQERGMVLLQWKKKRYSHGGTSWKVHRQIWQFSSLFSKIRSWEFNEVTSMS
EHLKACPFNIIEHKTDPVRLTSMCQPQEQTRESLVSTFRARPRGRHT
NT seq
2124 nt
NT seq
+upstream
nt +downstream
nt
atgggcagggcacacaggcccccacctgggcagcacaggcattgtgaaggatgcatcaac
cgccactgccatgttcctgtggagcccagcatctcctgcctggtgataaattgccgcctg
ctctgtggtgctaccttccacatgtgcaaagaggcagagcacgagctcctctgcccttta
gagcaggtgccgtgtctcaattctgaatatggctgccctctctccatgtcccgccacaag
ctggccaagcatctgcagatatgccctgctagtgtggtctgctgctccatggaatggaac
cgctggccaaacatagattctgaaaccatccttcatgagaacatcatgaaagaaaacccc
agtgaggagtgtttggacacagcactggccctccaggaccagaatgttctcttcagatcc
ttgaaaatggtagaacttttcccagaaacgagagacaccactgaggaggaaccaatgact
ggtgaagccagttgggaggagatgggaggcgccgtggggggaatggatgtcagttcagta
ccgcatggctgtctgtcagtaacaaatggggagatggtggagttaagtcaggaagaacgg
gagatgttagccaaaaccaaagaaggaatggatctggttaagtttggcaagtgggaaaat
atgttcagcaaagagcacgccgcttctgctttaacaggctcagcggggatgtgtgagacc
aagagtcggcatggagcagggaaagaccagtgttctggtggtgatgaccccactgacaca
aatgttgctacaagtgggacagcaccacaggaagaccagaggcagaaggaatttgccgcg
gccatggaaatgacagggcttgccccctggcaggatggtgttctggaaagactgaaaaca
gctgtagacccaaaagactataacatgtacctagtgcacaatggccggatgctcattcac
ttcgggcagatgcctgcttgtacccctaaggaaagagactttgtttatggcaaccttgag
gctcaggaagtgaagaccgtttacaccttcaaagtgcctgtgagctactgtggaaagcga
gcccgcctcggagatgccatgttgagatgtaggccaagtgaacacaaggctgtggatact
tcagatttaggggtcactgtggaggacctgccaaaatcagatctcatcaagactaccctc
cagtgtgctttggaaagagaactcaaaggccacatcatttctgagtccaggagcattgat
gggttgttcatggattttgccacccagacatacaactttgaaccagaacagttttcctcg
gggacagtgctggctgacctcctaaacactggcaaccctgggggactccacgttgagctc
cacagtgagtgtgtgaccaggagacacaacaagagtagctctgcctttacgtttacctgc
aataagttcttccggagggatgaatttcccctgcacttcaagaacgtccatacagacatt
cagtcatgtctcaatggctggttccagcatcgatgccccctagcctacttagggtgtaca
tttgttcaaaaccatttccgtcctccagggcaaaaggcaaaagtgatctacagtcaggag
ctcaagacctttgccatcaagccagaggttgcccctgagctaaatgagggaaagaataac
catctcttgggtggaagaaaaagccagaattgtttaacaagcctgcccctggaggttttg
caatacatcgctgggttcttggacagcatcagcctgtctcagctctcccaggtgtctgtg
ctgatgaagaatatctgtgccactctgttacaagagagagggatggtccttttacaatgg
aagaagaagaggtattcccatggaggcacttcctggaaagtccacaggcagatctggcag
ttcagcagccttttctccaaaatcaggagctgggagttcaatgaagttacctccatgtct
gaacacctgaaggcctgtcctttcaacatcatagagcacaagactgacccagtccgtttg
accagcatgtgtcagccccaagagcagacacgggagagcttagtgtccacctttagggcc
agaccacgaggaagacacacctaa
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