Perognathus longimembris pacificus (Pacific pocket mouse): 125351789
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Entry
125351789 CDS
T08928
Symbol
Itgb5
Name
(RefSeq) integrin beta-5
KO
K06588
integrin beta 5
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop04145
Phagosome
plop04148
Efferocytosis
plop04151
PI3K-Akt signaling pathway
plop04510
Focal adhesion
plop04512
ECM-receptor interaction
plop04810
Regulation of actin cytoskeleton
plop04820
Cytoskeleton in muscle cells
plop05165
Human papillomavirus infection
plop05205
Proteoglycans in cancer
plop05410
Hypertrophic cardiomyopathy
plop05412
Arrhythmogenic right ventricular cardiomyopathy
plop05414
Dilated cardiomyopathy
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
125351789 (Itgb5)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
125351789 (Itgb5)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
125351789 (Itgb5)
04148 Efferocytosis
125351789 (Itgb5)
09144 Cellular community - eukaryotes
04510 Focal adhesion
125351789 (Itgb5)
09142 Cell motility
04820 Cytoskeleton in muscle cells
125351789 (Itgb5)
04810 Regulation of actin cytoskeleton
125351789 (Itgb5)
09160 Human Diseases
09161 Cancer: overview
05205 Proteoglycans in cancer
125351789 (Itgb5)
09172 Infectious disease: viral
05165 Human papillomavirus infection
125351789 (Itgb5)
09166 Cardiovascular disease
05410 Hypertrophic cardiomyopathy
125351789 (Itgb5)
05412 Arrhythmogenic right ventricular cardiomyopathy
125351789 (Itgb5)
05414 Dilated cardiomyopathy
125351789 (Itgb5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
plop04131
]
125351789 (Itgb5)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
plop04515
]
125351789 (Itgb5)
Membrane trafficking [BR:
plop04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
125351789 (Itgb5)
Cell adhesion molecules [BR:
plop04515
]
Integrins
Integrin beta subunits
125351789 (Itgb5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_beta
Integrin_B_tail
EGF_integrin
PSI_integrin
Integrin_b_cyt
EGF_2
I-EGF_1
vWA_SIBA-E
EGF_TEN
Motif
Other DBs
NCBI-GeneID:
125351789
NCBI-ProteinID:
XP_048202755
LinkDB
All DBs
Position
5:complement(49955965..50068184)
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AA seq
800 aa
AA seq
DB search
MPRGPAPAYYACLLGLCALVPRLAGLNICTSGSATSCEECLLIHPKCSWCSKEYFGSPRS
VTSRCDLRANLIRNGCDGEIESPASSTHILRSLPLSNKGSGIMGSDVIQMTPQEVAVNLR
PGDQTTFQLQVRQVEDYPVDLYYLMDLSLSMKDDLDSIRNLGTKLAEEMRKLTSNFRLGF
GSFVDKDISPFSYTAPRYQTNPCIGYKLFPNCVPSFGFRHLLPLTDRVDSFNEEVRKQRV
SRNRDAPEGGFDAVLQAAVCKEKIGWRKDALHLLVFTTDDVPHIALDGKLGGLVQPHDGQ
CHLNEANEYTASNQMDYPSLALLGEKLAENNINLIFAVTKSHYMLYKNFTALIPGTTVEI
LHGDSKNIIQLIINAYNSIRSKVELSVWNQPEDLNLFFTATCQDGMSYPGQRKCEGLKIG
DTASFEVSVEARSCPSRHTEHKFTLRPVGFRDTLQVGVTYNCTCGCSAGLEPDSARCSGN
GTYVCGLCECNPSHLGTRCECQEGENQSGYQNLCREAEGKPLCSGRGECSCNQCSCFESE
FGRIYGPFCECDSFSCARNKGVLCSGHGECHCGECKCHAGYIGDNCNCSTDISTCQAKDG
QICSERGHCICGQCQCTEPGAFGETCEKCPTCPDACSTKRECVECLLLHLGKPDNQSCHH
LCKDEVITWADAIVKDDQEAVLCFYKTAKDCVMMFTYADLPSGKSNLTVLREPECGSAPN
TVTILLAVVGSILLIGLALLAIWKLLVTIHDRREFAKFQSESSRARYEVALNPLYRKPIS
THAVDFTFNKFSKTYNGTVD
NT seq
2403 nt
NT seq
+upstream
nt +downstream
nt
atgccgcggggtcccgcacccgcctactacgcctgcctcctggggctctgcgcgctcgtg
ccgcgcctcgcaggacttaacatatgtaccagtggaagtgccacctcgtgtgaagaatgt
ctgctaatccatccaaaatgttcctggtgctccaaagagtactttggcagcccacggtca
gtcacctcgcggtgtgacttgagggcaaacctcatccgaaacggctgtgatggtgagatc
gagagcccggccagcagcacccacatcctgcggagcctgccgctcagcaataagggctcc
ggcatcatgggctccgacgtcatccagatgacaccacaggaagtcgccgtgaacctccgg
cctggtgaccagaccaccttccagcttcaggtacgccaggtggaggactaccctgtggac
ttgtactacctgatggacctctccctctccatgaaggatgacttggacagcatccgcaac
ctgggcaccaagcttgctgaggagatgaggaagcttactagcaacttccggttgggtttt
gggtcctttgttgacaaggacatctctcctttctcctacacagcaccgaggtaccagaca
aatccctgcatcggttacaagttgtttccaaactgtgtcccgtcctttgggttccgccat
ctgctgcctctcacagacagagtggacagcttcaacgaggaagttcggaaacagagggtg
tccaggaaccgcgatgcccccgaggggggctttgacgcagtcctccaggccgctgtctgc
aaggagaagatcggctggcggaaggatgcattgcatctgctggtgttcacgacagatgac
gtgccccacatcgcactggatggaaaactaggtgggctggtgcagccccacgatggccag
tgccacttgaatgaggccaacgagtacactgcatccaaccagatggactacccatccctt
gccctgcttggagagaagttggcagagaataacatcaatctcatttttgctgtgacaaaa
agccactatatgctctacaagaattttaccgctctgatacctggaaccacagtggagatt
ttgcatggagactccaaaaacatcattcagctgattatcaatgcatacaatagtatccgg
tctaaagtggagctgtctgtctggaatcagccagaagatcttaacctcttttttactgct
acctgccaagatggcatgtcctatccaggccagaggaagtgtgagggtctgaagattggg
gacacggcgtcctttgaggtgtcagtggaggcccggagctgccctagcagacacacagag
cacaagtttaccctgcggcctgtggggttccgggacaccctgcaggtgggggtcacctac
aactgcacgtgcggctgcagtgctgggctggagcccgacagcgccaggtgcagcgggaac
ggcacgtatgtctgcggcctgtgtgagtgcaaccccagccacctgggcaccaggtgtgag
tgccaggaaggagagaaccagagcgggtaccaaaacctgtgccgggaggccgagggcaag
ccgctatgtagcgggcgcggtgaatgcagctgcaaccagtgctcctgcttcgagagcgag
ttcgggaggatctacgggcccttctgcgagtgtgacagcttctcctgcgccaggaacaag
ggtgtcctctgctcaggccatggcgagtgtcactgtggagaatgcaagtgccatgcaggt
tacattggggacaactgtaactgctcaacagacatcagcacgtgccaggccaaagatgga
cagatctgcagtgagcgcgggcattgtatctgtgggcagtgccagtgcacggagcctgga
gcctttggggagacgtgtgagaagtgcccaacctgcccggatgcttgcagcaccaagaga
gaatgtgtggagtgcctgctgcttcacttggggaaaccggacaaccagtcctgccaccac
ctgtgcaaggacgaggtaatcacctgggcggatgccatcgtgaaagatgatcaggaggcc
gtgctgtgcttttacaaaactgccaaggactgcgtcatgatgttcacctatgctgacctg
cccagtgggaagtccaacctgaccgtcctcagggagccagagtgcggatcagcccccaac
accgtcaccatcctgctagctgtggtgggcagcatcctcctgatcgggctcgcactcctt
gccatctggaagctgcttgtcaccatccatgaccgcagggagttcgccaagttccagagc
gagagctccagggcccgctatgaagtggctttgaaccccctgtacagaaagcccatctcc
acacacgcggtagacttcaccttcaacaagttcagcaagacctacaacggcaccgtggac
tga
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integrated database retrieval system
