Perognathus longimembris pacificus (Pacific pocket mouse): 125351797
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Entry
125351797 CDS
T08928
Symbol
Snx4
Name
(RefSeq) sorting nexin-4
KO
K17919
sorting nexin-4
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
125351797 (Snx4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
plop04131
]
125351797 (Snx4)
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
plop04990
]
125351797 (Snx4)
Membrane trafficking [BR:
plop04131
]
SNARE
SNARE associated proteins
Others
125351797 (Snx4)
Protein recycling
Rab GTPases and associated proteins
Rab4 associated proteins
125351797 (Snx4)
Autophagy
Cytoplasm to vacuolar targeting (CVT) pathway
Other Cvt associated proteins
125351797 (Snx4)
Domain-containing proteins not elsewhere classified [BR:
plop04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
125351797 (Snx4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PX
Vps5
Indigoidine_A
Motif
Other DBs
NCBI-GeneID:
125351797
NCBI-ProteinID:
XP_048202764
LinkDB
All DBs
Position
5:complement(50566003..50620125)
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AA seq
450 aa
AA seq
DB search
MEQAPPDPERQLQPAPLEPLGHSDTGPEAAVREEAEGAREDGSGLGTMTENNFWLKKIEI
SVSEAEKRTGRNAMNMQETYTAYLIETRSVEHADGQSILTDSLWRRYSEFELLRNYLLVY
YPHIVVPPLPEKRAEFVWHKLSADNMDPDFVERRRIGLENFLLRVASHPILCRDKIFYLF
LTQEGNWKETVNETGFQLKADSRLKALNATFRVKNPDKRFIELKHYSDELQSVISHLLRV
RARVADRLYGVYKVHGNYGRVFSEWSAIEKEMGDGLQSAGHHMDVYASSIDDILEDEEHY
ADQLKEYLFYAEALRAVCRKHELMQYDLEMAAQDLASKKQQCEELATGTVRTFSLKGMTT
KLFGQETPEQREARIKVLEEQINEGEQQLKSKNLEGREFVKNAWADIERFKEQKNRDLKE
ALISYAIMQISMCKKGIQVWTNAKECFSKM
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atggaacaagcacccccagaccccgagaggcagctgcagcctgcgcccctggagccgctg
ggtcactccgacaccgggccggaggctgcggtccgtgaggaagccgagggggcccgggaa
gacggctctgggttgggcacgatgacagaaaataatttttggttaaagaagattgaaatc
agtgtttcagaagcagaaaagcgaactggaagaaatgccatgaacatgcaggaaacctat
actgcttacctcattgagacaaggtcagttgagcatgctgatggtcagagtatcctaact
gactcactgtggaggcgatatagtgagttcgagttgttgagaaattaccttttggtttac
tatccacatattgttgtgccgcctctaccagaaaaacgggcagaatttgtttggcataaa
ctttctgctgacaacatggatccagattttgttgagagacggcggattggcttagaaaac
ttcctcttgagggttgcttcacatcccatcctttgtagagacaaaatcttctatttgttt
ttaacacaggaaggtaactggaaggagactgtcaacgaaactgggtttcagctgaaggca
gactccaggttaaaagcgcttaatgcaacattcagagtgaaaaacccagacaagagattt
attgaactaaagcactacagtgatgaactccaatctgtcatctcacatcttctcagagtg
agagctagagtagcagatcgactctatggtgtatataaagtacatgggaattatgggcga
gtttttagtgaatggagtgccatagagaaagaaatgggcgatggactgcagagtgccggc
caccacatggacgtgtatgcatcttctattgatgatattttagaagatgaagaacattat
gccgatcagttaaaggagtatcttttctatgcagaagcgctgagggccgtgtgcaggaag
catgagcttatgcagtatgacttggagatggcagcccaggacctggcgtcaaagaagcag
cagtgtgaggagctggccaccgggactgtgaggacattctctctgaaaggaatgacaacc
aagctctttggtcaagagactccagaacagagagaagccagaataaaggtgctagaggag
caaataaatgaaggagaacagcagctgaagtctaaaaatctggaaggcagagaatttgtg
aaaaatgcatgggctgatattgaacgcttcaaagaacaaaaaaaccgagacttaaaagag
gccctcataagctatgccattatgcagatcagtatgtgcaaaaagggaattcaagtttgg
accaatgctaaggagtgctttagcaagatgtaa
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