Perognathus longimembris pacificus (Pacific pocket mouse): 125351855
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Entry
125351855 CDS
T08928
Symbol
Lsg1
Name
(RefSeq) large subunit GTPase 1 homolog
KO
K14539
large subunit GTPase 1 [EC:3.6.1.-]
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
125351855 (Lsg1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
plop03009
]
125351855 (Lsg1)
Ribosome biogenesis [BR:
plop03009
]
Eukaryotic type
Pre-60S particles
GTPases
125351855 (Lsg1)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
MMR_HSR1
FeoB_N
RsgA_GTPase
AIG1
GTP_EFTU
NFACT-C
cobW
Motif
Other DBs
NCBI-GeneID:
125351855
NCBI-ProteinID:
XP_048202869
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Position
5:53159127..53195183
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AA seq
649 aa
AA seq
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MGRRRAVGSGSLGRALIRHQTQRTRSHRHSDSWLHTSELNDGYDWGRLNLQSVTEQSSLD
DFLATAELAGTEFVAEKLNIKFVLPEARTGLLSFEESQRIKKLHEENRQFLCIPRRPNWD
KKTSPEELKQAEKDNFLKWRRQLVRLEEEQKLMLTPFERNLDFWRQLWRVIERSDIVVQI
VDARNPLLFRCEDLECYVKEIDANKENIILINKADLLTAEQRSTWATYFEKEEVKIIFWS
ALAESIELNTFSKEQAHRDAEDASTADSESSSLDESEIPHSETHHLPGHSSPCPSDEDNS
EYEDCQEEEEEDWQTCSEEDSNPDEEAYTENRTVDSDAQGKKTPQRRQIHNFSHLVSKQE
LLELFKQLHTGRKVKDGQLTVGLVGYPNVGKSSTINTIMGNKKVSVSATPGHTKHFQTLY
VEPGLCLCDCPGLVMPSFVSTKAEMICNGILPIDQMRDHVPPVSLVCQNVPRRVLEATYG
ISIIKPREDEDPHRPPTSEELLTAYGYMRGFMTAHGQPDQPRSARYILKDYVKGKLLYCH
PPPGRDPVTFQHQHQRLLESRMNDEIKMQPGGNKKAKQIENVVDKTFFHQENVRALTKGV
QAVMGYKPGSGLVTPATLSAENGAGKPWKKHGNKNKKEKSRRLYKHLDM
NT seq
1950 nt
NT seq
+upstream
nt +downstream
nt
atgggacggcggagagcggtcggcagtgggtcgctgggccgggcccttatccgtcatcaa
acccagcggacccgaagccaccgtcactctgactcgtggttgcacacaagtgaactcaat
gatggctatgattggggccgtcttaaccttcagtcagtgacggaacagagctcccttgat
gactttctcgcaaccgcagaacttgcaggaactgagtttgtagctgagaagcttaacatt
aagtttgtgctccctgaggctagaactggactattgtcttttgaggagagtcagagaatt
aagaaacttcatgaggagaaccgacagttcttatgtatacccaggaggccaaattgggac
aaaaaaactagtccagaagaactcaaacaagcagagaaagataacttcctgaaatggagg
cgtcaacttgtccggctagaagaggaacaaaagttgatgctgactccatttgagcgcaac
ttggacttttggcgccagctctggagggtcattgagagaagtgatattgtggtgcagata
gtagacgctcgaaacccactcctgtttagatgtgaggatttggaatgttatgtgaaagag
attgatgccaataaggaaaacattattctgataaacaaagcagacttgttgactgctgag
cagcgcagcacctgggccacgtactttgaaaaggaagaggtgaagattattttctggtca
gctttggcagaatccattgaactgaatactttctccaaggaacaagcccacagagatgct
gaggacgccagcacagctgactctgaaagctccagcttggatgagagtgaaattccacac
agtgagacacaccatctcccaggccacagttctccctgtcctagtgacgaagacaacagt
gaatatgaggactgtcaggaggaggaagaggaggactggcagacatgttctgaagaggac
agcaaccctgacgaggaggcctatactgagaacaggactgtggactctgatgctcaggga
aagaagaccccacagaggagacagatacacaattttagccatctggtatcaaagcaggaa
ttactagagctctttaagcagctacacactgggaggaaggtgaaagatggccaacttact
gttggattggtgggctaccctaatgttggtaagagttcaaccatcaacaccatcatgggc
aacaagaaagtatccgtgtctgccactcctggtcacaccaaacacttccagactctctat
gtggagcctggcctctgcttatgtgactgcccgggcctggtgatgccgtcctttgtgtcc
accaaggccgagatgatatgcaatggaatcctccctattgaccagatgagagatcatgtc
ccacctgtatcactggtttgccagaatgttccaaggcgtgttttagaagctacctatggt
attagcatcataaagcctagagaagatgaagatcctcatcgacctccaacctcagaggaa
ctgttgacagcttatggatatatgcgaggattcatgacagcccatggacagccagaccaa
cctcgatctgcacgctatatcctaaaggattatgtcaaaggtaaactcctatactgccac
cctcctcctggaagagatcctgtgacattccagcatcaacaccagcgactcctggaaagc
agaatgaatgatgagatcaaaatgcagcctggggggaataaaaaagcaaagcagattgaa
aatgtagttgacaagacttttttccatcaagagaatgtgagagctttgaccaagggggtc
caggctgtgatggggtacaagcctgggagcggcctggtgactccagctaccttgagcgct
gagaatggggctgggaagccctggaaaaaacacggcaacaaaaacaaaaaagagaagagt
cgtaggctctacaagcacctggacatgtaa
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