Perognathus longimembris pacificus (Pacific pocket mouse): 125351871
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Entry
125351871 CDS
T08928
Symbol
Ccdc50
Name
(RefSeq) coiled-coil domain-containing protein 50 isoform X1
KO
K25949
coiled-coil domain-containing protein 50
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
plop04131
]
125351871 (Ccdc50)
Membrane trafficking [BR:
plop04131
]
Autophagy
Other autophagy associated proteins
Others
125351871 (Ccdc50)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CCDC50_N
DUF1462
Motif
Other DBs
NCBI-GeneID:
125351871
NCBI-ProteinID:
XP_048202898
LinkDB
All DBs
Position
5:complement(55913960..55971876)
Genome browser
AA seq
482 aa
AA seq
DB search
MAEVSIDQSKLPGVKEVCRDFAVLEDHTLAHSLQEQEIEHHLASNVQRNRLVQHDLQVAK
QLQEEDLKAQAQLQKRYKDLEQQDCEIAQEIQEKLTIEAERRRIQEKKDEDIARLLQEKE
LQEEKKRKKHIPEFSGAKAYGDNYYYEDGDLPRSRRARELGSGCSGSHRLQSEVKTVKQR
KEKPRHPLESLEELEERCSSETSLTSTNWRKVRDDPQITREQQERKQSNQERSRRPPLPK
ISGEVFLSSGSDDCEAHNGHQTRNWAKQSRHQDPLSPKTSQKSGLHFKEAVYGRDHGQSE
HRERRHRPRTPPFSEREELYHFHDPGMKPRVMKESISTPSRVTHRDQEWYDAEIARKLQE
EELLATQVDMRAAQVAQDEEIARLLMAEEKKAYKKAKDREKSSLDKRKHDPESKSKSSKS
THPKSKESDESHRSKNDRSARTHPAIVTEAEGPDCTHFTNQHNSTRHFSKSESAHKGFHY
KQ
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atggccgaagtcagcatcgaccagtccaagctgcctggcgtgaaggaagtgtgccgagat
tttgctgtcctagaggaccacaccctggctcacagcctacaggaacaagagattgagcat
catctggcatcgaatgttcagcggaaccgtttggtccaacatgatctccaggtagctaag
cagctccaagaggaagatctgaaagcccaggctcagctccagaagcgctacaaagacctt
gaacaacaagactgtgaaattgctcaggaaattcaagagaagctgactattgaggcagag
agacgccgcattcaagagaagaaggatgaggatatagctcgccttttgcaagaaaaggag
ttacaggaagagaaaaagagaaagaaacacattccagagttctctggagccaaggcttat
ggagataattactactatgaagatggagacctgccaaggtcaaggagggccagggagttg
ggttctggatgctcaggatctcatagactgcaaagtgaagtgaagactgtgaagcagagg
aaggagaaaccaagacatccactggagagcttggaagagttggaagaacgttgttcctca
gagacatccttgacatccactaattggagaaaagtaagggacgatccccaaattaccagg
gagcagcaggaaaggaagcaatctaatcaagagaggtctcggagacctccacttcccaag
attagtggtgaggtgtttctgagctctgggagtgatgactgcgaggctcacaatggccat
caaactcggaattgggcaaagcagtcccgacaccaagacccactttcacccaagacctca
cagaaatcggggcttcacttcaaggaagctgtatatgggagggaccatgggcaaagtgag
cacagagaaaggagacacaggcccaggactcctcccttctcagagagagaagagctgtac
cacttccatgacccaggaatgaagccaagagtgatgaaagaatctatctctactccatct
cgagtgacccaccgggatcaggagtggtatgatgctgagattgccagaaaactccaagaa
gaagaacttttggctacccaggtggacatgagagctgctcaagtcgcccaggatgaggaa
attgctcgacttctaatggctgaagaaaagaaagcatataaaaaagccaaagatcgggag
aagtcctctttggacaaaagaaagcatgaccctgaatcaaagtcaaaatcatctaaatca
acacacccaaagtcaaaggagagtgatgaatctcatcgttctaagaatgacaggtcagca
aggacacacccagctattgtgacagaagccgagggtccagattgcacacactttacaaac
cagcacaattccactcgtcacttctcaaaatcagagtctgctcataaaggcttccattac
aagcagtaa
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