Perognathus longimembris pacificus (Pacific pocket mouse): 125351938
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Entry
125351938 CDS
T08928
Symbol
Fxr1
Name
(RefSeq) fragile X mental retardation syndrome-related protein 1 isoform X1
KO
K15516
fragile X mental retardation protein
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
plop03019
]
125351938 (Fxr1)
Messenger RNA biogenesis [BR:
plop03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
125351938 (Fxr1)
Factors involved in mRNA localization
Other mRNA localization factors
125351938 (Fxr1)
mRNA cycle factors
Stress granule specific factors
125351938 (Fxr1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FXMRP1_C_core
FXR_C1
KH_9
Tudor_FRX1
FXR_C3
KH_1
Agenet
KH_2
KH-I_KHDC4-BBP
Tudor_2
Motif
Other DBs
NCBI-GeneID:
125351938
NCBI-ProteinID:
XP_048203005
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All DBs
Position
5:complement(66033621..66086501)
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AA seq
677 aa
AA seq
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MAELTVEVRGSNGAFYKGFIKDVHEDSLTVVFENNWQPERQVPFNEVRLPPPPDIKKEIS
EGDEVEVYSRANDQEPCGWWLAKVRMMKGEFYVIEYAACDATYNEIVTFERLRPVNQNKT
VKKNTFFKCTVDVPEDLREACANENAHKDFKKAVGACRIFYHPETTQLMILSASEATVKR
VNILSDMHLRSIRTKLMLMSRNEEATKHLECTKQLAAAFHEEFVVREDLMGLAIGTHGSN
IQQARKVPGVTAIELDEDTGTFRIYGESADAVKKARGFLEFVEDFIQVPRNLVGKVIGKN
GKVIQEIVDKSGVVRVRIEGDNENKLPREDGMVPFVFVGTKESIGNVQVLLEYHIAYLKE
VEQLRMERLQIDEQLRQIGMGFRPSSTRGPEKEKGYATDESTVSSVQGSRSYSGRGRGRR
GPNYTSGYGTNSELSNPSETESERKDELSDWSLAGEDDRESRHQRDSRRRPGGRGRSVSG
GRGRGGPRGGKSSISSVLKDPDSNPYSLLDNTESDQTADTDASESHHSTNRRRRSRRRRT
DEDAVLMDGMTESDTASVNENGLDDSEKKPQRRNRSRRRRFRGQAEDRQPVTVADYISRA
ESQSRQRNLPRETLAKNKKEMAKDVIEEHGPSEKAINGPTSASGDEIPKLQRTPGEEKIN
TLKEENTQEAAVLNGVS
NT seq
2034 nt
NT seq
+upstream
nt +downstream
nt
atggcggagctgacggtggaggttcgcggctccaacggggctttctataagggatttatc
aaagatgttcatgaagactctctcacagttgtttttgaaaataattggcagccagaacgc
caggttccatttaatgaagttagattaccaccaccacctgatataaaaaaagaaattagt
gaaggagatgaagtagaggtatactcaagagcaaatgaccaagaaccatgtggatggtgg
ttagctaaagttcgaatgatgaaaggagaattttatgtcattgaatatgctgcttgtgat
gccacttataatgaaatagtcacatttgaacgacttcggcctgtcaatcaaaataaaact
gtcaaaaaaaataccttctttaaatgcacagttgatgttcctgaagatttgagagaagcg
tgtgctaatgaaaatgcacataaagattttaagaaagcagtaggagcatgcagaattttt
taccatccagaaactacacagctaatgattctgtctgctagtgaagcaactgtgaagaga
gttaatatcttgagtgacatgcatttgcgaagtattcgtacaaagttgatgcttatgtcc
agaaatgaagaggccactaagcatttagaatgcacaaaacaacttgcagcagcttttcat
gaggaatttgttgtgagagaagatttaatgggcctggcaataggaacacatggtagtaac
atacagcaagcgaggaaggttcctggagttaccgccattgaactagatgaagatactgga
acatttagaatctatggagagagtgctgatgctgtgaaaaaggctagaggtttcttggaa
tttgtggaagattttattcaggttcctaggaatcttgttggaaaagtaattgggaaaaat
ggcaaagtcattcaagaaatagtggataaatctggtgtggttcgggtgagaattgaagga
gataatgaaaataaactacctagagaagatggcatggttccatttgtatttgttggcact
aaagaaagtattggaaatgtgcaagttctcttagaatatcatattgcctacctaaaggaa
gtggaacagctaagaatggaacgcctgcagatagatgaacagctgcgacagattggtatg
ggtttcagaccttcttccaccagagggcctgaaaaagagaaaggatatgccactgatgaa
agtaccgtctcttctgtacaaggttctaggtcttatagtggaagaggcagaggtcgtcgg
ggccctaattacacctccggttatggtacaaattctgagctgtctaacccctctgaaaca
gaatctgaacgcaaagatgagttgagtgattggtcattggcgggagaagatgatcgagag
agccgacaccagcgtgacagcaggagacgcccaggaggaagaggcagaagtgtttcaggg
ggtcgaggtcgaggtggaccacgtggtggcaaatcttccatcagttctgtgctcaaagat
ccagacagcaatccatacagcttacttgataatacagaatcagatcagactgcagacact
gatgccagcgaatctcatcacagtactaaccgtcgtaggcggtctcgtagacgaaggact
gatgaagatgctgttctgatggatggaatgactgaatctgatacagcctcagttaatgaa
aatgggctagatgatagtgaaaaaaaaccccagcgacgcaatcgtagccgcaggcgtcgt
ttcaggggtcaggcagaagatagacagccagtcacagttgcagattatatttctagagct
gagtctcagagcagacaaagaaacctcccaagggaaactttggctaaaaacaagaaagaa
atggcaaaagatgtgattgaagagcatggtccttcagaaaaggcaataaatggcccaact
agtgcttctggcgatgaaattcctaaactacagcgtactccaggagaagaaaagattaat
accttaaaagaggaaaatacccaagaagcagcagtcctgaatggtgtttcataa
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