KEGG   Perognathus longimembris pacificus (Pacific pocket mouse): 125351991
Entry
125351991         CDS       T08928                                 
Symbol
Kdm4c
Name
(RefSeq) lysine-specific demethylase 4C isoform X1
  KO
K06709  [histone H3]-trimethyl-L-lysine9/36 demethylase [EC:1.14.11.66 1.14.11.69]
Organism
plop  Perognathus longimembris pacificus (Pacific pocket mouse)
Brite
KEGG Orthology (KO) [BR:plop00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:plop03036]
    125351991 (Kdm4c)
Enzymes [BR:plop01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.66  [histone H3]-trimethyl-L-lysine9 demethylase
     125351991 (Kdm4c)
    1.14.11.69  [histone H3]-trimethyl-L-lysine36 demethylase
     125351991 (Kdm4c)
Chromosome and associated proteins [BR:plop03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    125351991 (Kdm4c)
SSDB
Motif
Pfam: JmjC zf-HC5HC2H_2 Tudor_2 zf-HC5HC2H PHD_2 JmjN PHD Tudor_5 LBR_tudor DUF7141
Other DBs
NCBI-GeneID: 125351991
NCBI-ProteinID: XP_048203136
LinkDB
Position
1:109400611..109715197
AA seq 1088 aa
MEVAEAGSPLNPSCKIMTFRPSMEEFREFNKYLAYMESKGAHRAGLAKVIPPKEWKPRQC
YDDIDNLLIPAPIQQMVTGQSGLFTQYNIQKKAMTVKEFRQLANSGKYCTPRYLDYEDLE
RKYWKNLTFVAPIYGADINGSIYDEGVDEWNIARLNTVLDVVEEECGISIEGVNTPYLYF
GMWKTTFAWHTEDMDLYSINYLHFGEPKSWYAIPPEHGKRLERLAQGFFPSSSQGCDAFL
RHKMTLISPSVLKKYGIPFDKITQEAGEFMITFPYGYHAGFNHGFNCAESTNFATVRWID
YGKIAKLCTCRKDMVKISMDIFVKKFQPDRYQLWKQGKDIYTIDHIKPTPESTPEVKAWL
QRRRKVQKAPKSVQGNRSHSKRPKAEEDEEMSFKDNGEEVPSSGTGLENLKIGGKPRGGS
KLGKTDIPSEEPSVNRMQMDQSFSDSTKLSGNSCLNASTVEEIKAEDDKAYTTGVSYMSQ
EASGSTLLSCGLVKVEESDPRKQQRQKSPESGSSVAESNRVYTEGEESDVEDQGSGLEPG
EISSVLNEDRNDFKVPSMIEGETKTAKSWRHPLSKPPARSPMTLVKQQAASDEELPEVPS
TEEEVEETESWAKPLIHLWQTKPPNFVAEQEYNAAVAKMEPHCAICTLLMPYYKPDSSNE
ENDLRWETKLNEVVTLGGKTKPLIPEMCFIYSEENIEYSPPNAFLEEDGTSLLISCAKCC
VRVHASCYGVPSHEICDAWLCARCKRNAWTAECCLCNLRGGALKQTENNKWAHVMCAVAV
PEVRFTNVPERTQIDVGRIPLQRLKLKCIFCRHRVKRVSGACIQCSYGRCPASFHVTCAH
AAGVLMEPDDWPYVVNITCFRHKVNPNVMLQEADAPVQVSGDGEQRPYLGFGGTSKIDLK
ALKSKACEKAISVGQTVITKHRNTRYYSCQVMAVMSQTFYEVMFDDGSFSRDTFPEDIVS
RDCVKLGPPGEGEVVQVKWPDGKLYGAKYLGSNVAYMYQVEFEDGSQIAMKREDIYTLDE
ELPKRVKARYSTASNMRFEDTFYGADIIQGERKRQRVLSSRFKNEYVDDPVYRTFLKSSF
QKKCQKRQ
NT seq 3267 nt   +upstreamnt  +downstreamnt
atggaggtggcagaggcggggagccccctgaaccccagctgtaagataatgactttcaga
ccctccatggaggagttccgggagttcaacaaataccttgcctacatggagtcgaaagga
gctcaccgagctggtcttgcaaaggtgattcctccaaaggaatggaagccaagacaatgc
tatgatgacattgataatttgcttattccagcgccaattcagcagatggtcacagggcaa
tcgggactgtttactcaatacaacatccagaaaaaggccatgactgtgaaggagttcagg
caactggccaacagtggcaaatattgtactccaagatacttggattatgaagatttggag
cgcaaatactggaaaaatttaacttttgtggcacctatctatggtgcagatattaatggg
agcatatatgatgagggtgtggatgaatggaacatagctcgtctaaatactgtcttggat
gtagtggaagaagagtgtggtatttctattgagggtgtgaatactccctacctctatttt
ggcatgtggaaaaccacatttgcatggcacactgaggacatggacctctacagcattaat
tatctccactttggagagcccaaatcttggtatgctatacccccggaacatggaaaacga
cttgaaagactagcccaaggttttttcccaagcagctcccaaggttgtgatgcatttctt
cgccacaagatgacactgatttctccttctgtgttgaagaagtatggcattccctttgac
aagatcacccaggaggctggggagttcatgatcacttttccatatggttaccatgctggt
ttcaatcacggtttcaactgtgcagagtctacaaattttgctactgtcagatggattgac
tatggaaaaattgctaaattgtgtacttgcaggaaagacatggtgaaaatttcaatggat
atctttgtgaagaaatttcagccagatagataccagctttggaaacaaggaaaggatatc
tacaccattgaccacataaagcctaccccagaatccactcctgaagtaaaagcttggttg
cagaggaggaggaaagtacagaaagcacccaagagtgtccagggaaataggtctcactcg
aaaaggcctaaggctgaagaggatgaagaaatgtcctttaaagacaatggggaagaggta
cccagttctggcacaggcttagagaaccttaagattggaggaaagccaagaggagggtca
aaactggggaagacagacataccctctgaagagccctctgtcaacaggatgcagatggat
cagagtttctcagatagtaccaaactctcaggaaacagctgcttaaatgcatctacagtg
gaggaaataaaagctgaagatgacaaagcctacaccacaggtgtatcatatatgtcccag
gaggccagtggttccacactattgtcttgtggcctggtaaaggtggaggaatcagaccca
cgtaagcagcagaggcaaaagtctcctgagtcaggttcctcagtggcagagagtaatcgt
gtgtatacagagggagaagagagtgatgtagaagaccaaggaagtggcctggaacctggg
gaaatctcatcagtcctcaatgaagatagaaatgacttcaaggtccctagtatgatagag
ggagagaccaaaactgctaagagttggcggcatccacttagtaagcctccagccagatct
ccaatgactcttgtaaagcagcaggcagcaagtgatgaagaattgcctgaggtcccatcc
actgaggaggaagtggaagaaacagagtcctgggcaaagcctctcatccacctctggcag
acaaaacctcccaattttgtggctgagcaagagtataatgcagctgtagccaagatggag
ccacactgtgctatctgtacactgctcatgccatactataagccagatagcagcaatgaa
gaaaatgacttgagatgggagacaaaattgaatgaagtggttactttgggaggaaagact
aagcccctcatcccagagatgtgttttatttatagtgaagaaaacatagaatattccccc
cctaatgccttccttgaagaggatggaacaagtcttctaatttcctgtgcaaagtgctgt
gtacgagttcatgcaagttgttatggtgtcccttctcacgagatctgtgatgcatggcta
tgtgctcgatgcaaaagaaatgcgtggacagcagaatgctgtctctgcaatttgagaggt
ggtgctctgaagcaaactgagaacaataagtgggcccatgtcatgtgtgctgttgccgtc
ccagaagttcgattcactaatgtcccagaaaggacacaaatagatgtaggcagaatacct
ttacagaggttaaaattgaaatgcatcttctgcagacatcgggtaaagagagtctctgga
gcttgtatccagtgttcctatggccgatgcccagcttccttccatgtcacgtgtgcccac
gccgctggggtactgatggaacctgatgattggccttatgtggtgaacatcacgtgcttc
cgccataaggttaacccaaacgtgatgctgcaggaagctgacgcaccagtgcaggtgagc
ggagatggggaacagcggccatatcttggttttggaggcacttcgaagatagacttaaag
gccttgaaatccaaggcatgtgagaaggccatctctgttggtcagacagtcatcacaaag
catcggaacacgcggtactacagctgccaggtgatggcggtgatgtcacaaaccttctat
gaggtcatgtttgatgatggctcctttagcagagacacatttcctgaagatattgtgagc
cgggactgtgtgaagctgggccctcctggtgagggagaagttgtccaagtcaagtggccc
gatggcaaactctacggagcaaaataccttggatcaaatgttgcctatatgtaccaggtt
gaatttgaagatggatcccagatagcaatgaagagagaggacatctataccttagacgaa
gaactacccaagagggtgaaggctcgttattccacagcctctaacatgcggtttgaagac
acgttttatggagcagacataatccaaggggagaggaagaggcaaagagtgctgagctcc
aggttcaagaacgaatatgtggacgaccctgtgtatcgcactttcttgaagagctctttc
cagaaaaagtgtcagaagaggcaatag

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