Perognathus longimembris pacificus (Pacific pocket mouse): 125352015
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Entry
125352015 CDS
T08928
Symbol
Smc4
Name
(RefSeq) structural maintenance of chromosomes protein 4
KO
K06675
structural maintenance of chromosome 4
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
plop03036
]
125352015 (Smc4)
Chromosome and associated proteins [BR:
plop03036
]
Eukaryotic type
Chromosome condensation proteins
Condensin I
125352015 (Smc4)
Condensin II
125352015 (Smc4)
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_15
AAA_21
AAA_29
TPR_MLP1_2
ABC_tran
Motif
Other DBs
NCBI-GeneID:
125352015
NCBI-ProteinID:
XP_048203142
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Position
5:complement(80433878..80466520)
Genome browser
AA seq
1288 aa
AA seq
DB search
MPRKGAQPSSARRREEAPPVTPDGASSDAEPELRAAGAPSLPAASPETPGEELDTRSLEE
ILSSIPPPPPPAMTNEAGAPRLMITHIVNQNFKSYAGEKILGPFHKRFSCIIGPNGSGKS
NVIDSMLFVFGYRAQKIRSKKLSVLIHNSDEHKDIQSCTVEVHFQKIIDKEGDDYEVVPS
SNFYVSRTAYRDNTSVYHISGKKTTFKDVGNLLRSHGIDLDHNRFLILQGEVEQIAMMKP
KGHTEQDEGMLEYLEDIIGCGRLNEPIRILCRRVEVLNEHRGEKLNRVKMVEKEKDALEG
EKNMAIEYLTLENEIFKKKNHVCQYYIYDLQKRTAEIQTQKEKIYEDTKEINEKSNRLSE
EMKAKNKAVKDVEKKLNKITKFIEENKEKYTQLDLEDVQVREKLQHAKIKAKKLEKQFQK
DKEKAEDFKNLPVNSKNIITEATARSNSLEKEKEKEEKKLKEVMDSLKQETQGLQNEKES
REKELMGFNKSVNEARSKMDVAQSELDIYLSRHNTAVSQLNKAKEALGTASETLKERKTA
IKDIEAKLPQTEQELKEKEKEFQKLTQEEKNLKSLVHDLFQKVEEAKSSLAMNRSRGKVL
DAIIQEKKSGRIPGIYGRLGDLGAIDEKYDIAISSCCHALDYIVVDSIDTAQECVNFLKR
NNIGVATFIGLDKMAVWAKKMTKIQTPENTPRLFDLVRVKDDKIRQAFYFALRDTLVADN
LDQATRVAYQKDKRWRVVTLQGQIIEQSGTMTGGGSKVMRGRMGSSLVLELSEEEVNKME
SQLQKDSQKTTQIQEQKVQLEEAIVKLRHSEREMRNTLEKFTASIQRLSEQEEYLSVQIK
ELEANVLATAPDKKKQKLLEGNVNAFKAEYEAVAKKAGKVEAEVKRLHDLIVEINNHKLK
AQQDKLDKINKQLDECASAITKAQVAINTADRNLKKAQDSAFRTEKEIKDTEKEVKDLQA
ELKNLEEKATEVISNTNAAEESLPEIQKEHRNLLQELKVIQENEHALQKDALSIKLKLEQ
IDGHIAEHNSKIKYWQKEISKITLHPIEDHPIEEISVLSTKDLEAIKNPDSITNQIALLE
AQCHEMKPNLGAIAEYKKKEELYLQRVAELDKITSERDNFRRAYEDLRKQRLNEFMAGFY
VITNKLKENYQMLTLGGDAELELVDSLDPFSEGIMFSVRPPKKSWKKIFNLSGGEKTLSS
LALVFALHHYKPTPLYFMDEIDAALDFKNVSIVAFYIYEQTKNAQFIIISLRNNMFEISD
RLIGIYKTYNITKSVAVNPKEIASKGLC
NT seq
3867 nt
NT seq
+upstream
nt +downstream
nt
atgccccggaaaggcgcccagccgtccagcgcccggcgccgagaggaagcgccgccggtg
accccggacggcgccagcagcgacgcggagcccgagctgcgggccgccggcgccccgagc
ctgccagcggcctccccagagactccaggtgaggagctcgacacccggagtttagaagag
attttgagtagtatccctccacccccgccccccgccatgaccaacgaagccggagctccc
cggctcatgatcactcacatcgtaaaccagaacttcaagtcttacgccggggaaaaaatc
ctgggacccttccataagcgcttttcctgtataattgggccaaatggcagtggcaaatcc
aatgttatcgattctatgctttttgtgtttggctatcgggctcaaaaaataagatctaag
aaactgtcggtgctaattcataattctgatgagcataaggatattcagagttgcactgtg
gaggttcattttcaaaagataatcgataaggaaggggatgattatgaagtcgttcctagt
agtaacttctatgtatctagaacggcctacagagataatacttctgtctatcacattagt
gggaagaaaactacattcaaggatgttggaaatcttcttcgaagccatgggattgacttg
gaccataatagatttctaatcttacagggtgaagttgaacagattgctatgatgaaacca
aaaggccatactgaacaagacgagggtatgcttgaatatctagaagacataattggctgt
ggacgactgaatgaacctattagaatcttgtgtcggagagttgaagtactgaatgaacac
agaggagagaagctaaacagagttaaaatggtggaaaaagaaaaggatgccttagaagga
gagaagaacatggccattgaatatctgaccttagaaaatgaaatatttaaaaaaaagaat
catgtttgtcaatactacatttatgacctgcagaaacgaactgctgaaatacaaactcaa
aaggaaaaaatttatgaagacaccaaagaaatcaatgagaagagtaatagactgtcagag
gaaatgaaagctaagaataaagctgttaaagatgtagagaagaaactgaataaaatcaca
aaatttattgaggagaataaagaaaaatatacacaactagatttggaagatgttcaagtt
agagagaaattacaacatgctaaaattaaagctaaaaaactagagaaacaatttcaaaaa
gataaagagaaggctgaagactttaaaaatctgcccgtcaacagtaagaatatcataacg
gaggcaacagccagaagcaattcccttgagaaggaaaaggagaaagaagaaaaaaagttg
aaggaagttatggacagcctaaaacaggaaactcaggggcttcagaatgaaaaagaaagt
cgagagaaagaacttatgggtttcaacaaatcagtaaatgaagcacgttcaaagatggat
gtggcccagtcagaacttgatatctatctaagccgacataacactgcagtgtctcagcta
aataaggcaaaagaagccttgggtacagcttctgaaactctgaaagaaaggaagactgcc
atcaaagatatagaggccaagctccctcaaactgaacaggaattaaaggagaaagaaaaa
gaattccaaaaacttacacaagaagaaaaaaatttgaagagtttggttcatgatcttttt
caaaaagttgaagaagcaaagagttccttagcgatgaatcgaagtagggggaaagtcctg
gatgcgatcattcaagaaaaaaaatcaggcaggatcccaggaatatatggaagattgggg
gatttgggagccattgatgaaaaatacgatatcgccatttcatcctgttgtcatgcctta
gactacatcgttgttgattctatcgatacagcccaagaatgtgtgaactttctgaagaga
aataacattggagttgctaccttcataggtctggataagatggcagtgtgggcaaaaaag
atgaccaaaattcaaactcctgagaacacccctcggttatttgatttagttagagtaaaa
gatgacaaaatccgccaagctttttactttgctttacgggataccttggtagctgacaac
ttagatcaagccacaagagtagcctatcagaaggacaaacggtggagagtggtaacctta
cagggacaaatcatcgaacagtcaggcacaatgaccggcgggggaagcaaagtgatgagg
gggagaatggggtcttcgctcgtcctggaactctctgaggaagaggtaaataaaatggaa
tcacagttgcaaaaagattctcagaaaacaacacaaatccaagaacagaaagtacagctt
gaagaagccatagttaagttaaggcacagtgaaagagaaatgaggaatacactagaaaag
ttcactgcaagcatccagcggttatcagagcaagaagaatatttaagtgtccaaattaag
gaacttgaagccaatgtacttgctacagctcctgacaaaaaaaaacagaaattactagaa
ggaaatgtcaatgctttcaaagccgaatatgaagctgtggcaaagaaagctggcaaggta
gaagctgaggtcaaacggttacatgatctcatcgtagaaatcaacaaccataaactcaag
gcccaacaagacaaactggataaaatcaacaagcagttagatgaatgtgcctctgctatt
actaaagcccaagtagcgatcaatactgctgacagaaatcttaaaaaggcacaagactct
gcctttcgcacagagaaagaaataaaagacacagagaaagaagtgaaggacttgcaagca
gagctaaaaaaccttgaggagaaagcaacagaagtcatcagcaacaccaatgctgcagag
gaatccttaccagagatccagaaggaacatcgtaacctacttcaggaactgaaagttatt
caagaaaatgaacatgctcttcaaaaagatgcactgagtattaagttgaaacttgagcaa
attgatggtcacattgctgaacataactctaaaataaaatactggcaaaaggagatttca
aaaattacattgcaccctatagaagatcatcctattgaagagatctcagttctaagcaca
aaggacctagaagcaatcaagaacccagattctatcacaaaccaaattgcacttttggaa
gcccagtgccatgaaatgaaaccaaaccttggtgccattgcagagtataaaaagaaggaa
gaactgtatttgcaacgagtagcagaattggacaaaattacatctgaaagagataatttt
agacgggcctatgaagatcttcgaaaacaaagacttaatgagtttatggcaggtttttat
gtaataacaaataaattaaaggaaaactaccagatgcttactctaggaggggatgcagaa
ctagaacttgtagacagcttggatcccttctctgaaggaatcatgttcagtgttcggcca
cctaagaaaagttggaagaagatcttcaatctctcaggaggagagaaaacgctcagctca
ctggctttagtatttgcccttcaccactacaagcccactcccctttacttcatggacgaa
atcgatgcagcccttgactttaaaaatgtatccattgttgccttttacatatatgaacaa
acgaaaaatgcccaattcatcataatttctcttcgaaacaatatgtttgagatttcagat
agacttattggaatttacaaaacatacaatataacaaagagtgttgcagtaaacccaaaa
gaaatagcatctaaaggactttgttga
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