Perognathus longimembris pacificus (Pacific pocket mouse): 125352018
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Entry
125352018 CDS
T08928
Symbol
Trim59
Name
(RefSeq) tripartite motif-containing protein 59
KO
K12028
tripartite motif-containing protein 59
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
plop04121
]
125352018 (Trim59)
Ubiquitin system [BR:
plop04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
125352018 (Trim59)
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Gene cluster
GFIT
Motif
Pfam:
zf-RING_UBOX
zf-C3HC4
zf-B_box
zf-C3HC4_2
zf-RING_2
zf-C3HC4_4
RING_XB3-XBAT31
zf-RING_5
U-box
zf-C3HC4_3
zf-Nse
CorA
Motif
Other DBs
NCBI-GeneID:
125352018
NCBI-ProteinID:
XP_048203148
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All DBs
Position
5:80422149..80431656
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AA seq
400 aa
AA seq
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MHNFEDELTCPICYSIFEDPRVLPCSHTFCRNCLENVLQASGNFYIWRPLRIPLKCPNCR
SIIEIAPSGIESLPVNFALRAIIEKYQQEDHPDIVTCPEHYRQPLNVYCLLDKKLVCGHC
LTIGQHHGHPIDDLQSAYLKEKDTPRSLLKQLTDAHWTDITCLIEKLEEQKSHSEKMVQS
DKEVVLQYFKELTDILEQKKKNFLTALCDVGNLMSQEYTPQIERLKEIREQQLELVTMTT
SLQEESPLKFLEKIDDVRQRVQMLKERPLPDVQPVEIQPRVSKVLKEEWNRTEIGKIRKA
FIPEMKISSKRVPCSWPDKDEKEIELFKILNIAIVTLISVILMLILLFNHHIITFLNEIT
SICFSEVSLSIYQSLSNNLHDLQNILCHPFYFLKEFMWGK
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
atgcacaattttgaggacgagttaacgtgtcccatttgttacagtatttttgaagatcct
cgtgtattaccatgttctcatacattttgtagaaattgtttggaaaacgttcttcaggca
tctggtaatttttatatatggagacctttgcgaattccactcaagtgccctaattgcaga
agtattattgaaattgctccaagtggaattgaatctttacctgttaattttgcattaagg
gctatcatcgaaaagtatcagcaggaagaccatccagatatcgtcacctgccctgaacac
tataggcaaccactgaatgtttattgtctgctggataaaaaattagtttgtggtcattgc
ctaactataggtcaacatcatggtcatcctatagatgaccttcagagtgcttatctgaaa
gaaaaggacacaccacgaagtttgctcaagcagcttactgatgcacattggacagatatt
acttgtcttattgaaaagctagaagaacagaaatcccattcagagaaaatggtccaaagt
gacaaggaagttgttctccagtattttaaggagcttactgatatattagaacagaaaaag
aagaatttcctaaccgctctctgtgatgttggcaatttgatgagtcaagaatatactcca
cagatcgaaagattgaaagaaatacgagagcagcagcttgaactggttaccatgaccaca
tctttacaagaagagtctccacttaaatttctagaaaaaattgatgatgttcgccaacgt
gtgcagatgctaaaagaaagaccacttcctgatgtccaacctgttgaaatccagcctcgg
gtaagcaaagtgctaaaagaagaatggaacagaacggaaattggaaaaataaggaaagct
tttattcctgaaatgaagatttcttctaaaagggtgccctgttcctggcctgataaggat
gaaaaagagattgagctttttaagattttaaatattgctatagtcactctgatttcagtg
atattaatgttgatactccttttcaaccaccacataataaccttcttaaatgaaataact
tcaatatgtttttctgaagtctctttgtctatttaccaaagtttatctaacaatttgcat
gatttacaaaatatactatgtcaccctttttattttttaaaggaattcatgtgggggaag
tag
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