Perognathus longimembris pacificus (Pacific pocket mouse): 125352175
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Entry
125352175 CDS
T08928
Symbol
Lrfn2
Name
(RefSeq) leucine-rich repeat and fibronectin type-III domain-containing protein 2
KO
K16355
leucine-rich repeat and fibronectin type-III domain-containing protein 2
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
plop04515
]
125352175 (Lrfn2)
04990 Domain-containing proteins not elsewhere classified [BR:
plop04990
]
125352175 (Lrfn2)
Cell adhesion molecules [BR:
plop04515
]
Immunoglobulin superfamily
SALM family
125352175 (Lrfn2)
Domain-containing proteins not elsewhere classified [BR:
plop04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
125352175 (Lrfn2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
I-set
Ig_3
LRR_4
ig
fn3
LRR_5
LRR_9
Ig_2
Sp38
Motif
Other DBs
NCBI-GeneID:
125352175
NCBI-ProteinID:
XP_048203262
LinkDB
All DBs
Position
6:8676588..8700801
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AA seq
809 aa
AA seq
DB search
METLLGGLLAFGMAFAVVDACPKYCVCQNLSESLGTLCPSKGLLFVPPDIDRRTVELRLG
GNFIIHIGRQDFANMTGLVDLTLSRNTISHIQPFSFLDLESLRSLHLDSNRLPSLGEDTL
RGLVNLQHLIVNNNQLGGIADDAFEDFLLTLEDLDLSYNNLHGLPWDSVRRMINLHQLSL
DHNLLDHIAEGTFADLQKLARLDLTSNRLQKLPPDPIFARSQAFALTATPFAPPLSFSFG
GNPLHCNCELLWLRRLERDDDLETCGSPGGLKGRYFWHVREEEFVCEPPLITQHTHKLLV
LEGQAATLKCKAIGDPGPLIHWVAPDDRLVGNSSRTAVYENGTLDILITTSQDSGAFTCI
AANAAGEATATVEVSIVQLPHLSNSTSRTAPPKSRLSDITGSSKTSRGGGAAGAAGGGGS
GAGEPPKSAPDRAVLVSDVTTTSALVKWTVSKSAPRVKMYQLQYNCSDDEVLIYRMIPAS
NKAFVVNNLVSGTGYDLCVLAVWDDAATTLTATNIVGCAQFFTKADYPQCQSMHSQLVGG
TMILAIGGVIVATLLVFIVILMVRYKVCNHEAPGKMAAATVSNVYSQTNGAQPPPLGGPG
GGLGGGGVPAGPPLQAAPKVVVRNELLDFSAGLARGGDSSSSSSSLGSGEAAGLGRGPWR
LPPPAPRSKPNLDRLMGAFASLDLKSQRKEELLGSRTPAGRGSGTSARGRHSDREPLLGP
PAVRARSLLPLPLEGKAKRSHSFDMGDFAAAAGGVGVAPGGYSPPRRVSNIWTKRSLSVN
GMLLPFEESDLVGARGTFGSSEWVMESTV
NT seq
2430 nt
NT seq
+upstream
nt +downstream
nt
atggagaccctgcttggcgggctgctggcatttggcatggcgtttgccgtagtcgatgcc
tgccccaagtactgtgtctgccagaacctgtctgagtcactggggaccctgtgcccctcc
aaggggctgctcttcgtaccccccgacatcgatcgccggaccgtggagctgcgcctgggt
gggaacttcatcatccacatcggccgccaggacttcgccaacatgacgggcctggtggat
ctgacgctgtccagaaacaccatcagccacatccagcccttctccttcctggacctggag
agcctccgctccctgcacctcgacagcaaccggctgcctagcctgggtgaggacacgctc
cgcggcctggtcaacctgcaacacctcattgtcaacaacaaccagctggggggcatcgcc
gacgatgcctttgaggacttcctgctgacgctggaggacctggacctctcctacaacaac
ctccacggtctgccctgggactccgtgcggcgcatgatcaacctccaccagctgagcctg
gaccacaacctgctggaccacatcgccgagggcacctttgccgacctgcagaaattggcc
cgcctggatctcacctccaaccggctgcagaagctgcccccggaccccatcttcgcccgc
tcccaagctttcgctctgaccgccacccccttcgccccgccgctgtccttcagctttggg
gggaacccgctgcactgtaactgtgaactcctctggctgcggaggctggagagagatgac
gacctggagacgtgtgggtcgccggggggtctcaagggccgctacttctggcacgtgcgc
gaggaggagtttgtgtgcgagccccctctcatcacccagcacacgcacaagctgttggtc
ctggagggccaggcagccacactcaagtgcaaagccatcggggaccccggtcccctcatc
cactgggtggcccccgacgaccgcctggtggggaactcctccaggactgcggtgtacgag
aacggcaccctggacatcctcatcaccacctctcaggacagcggcgccttcacctgcatc
gcggccaacgccgcgggcgaggccaccgccacagtggaggtgtccatcgtccagctgcca
cacctgagcaacagcaccagccgcaccgctccccccaagtcccgcctctccgacatcacc
ggctccagcaagaccagccggggaggaggggcggcaggagcggcggggggaggaggcagt
ggcgctggagaacctcccaaaagtgcccccgaccgggctgtgctggtgtcagatgtgacc
accacctcagccttggtcaagtggaccgtcagcaaatccgcgccccgcgtgaagatgtac
cagctgcagtacaactgctccgacgacgaggtactgatctacaggatgatcccagcctcc
aacaaggcgttcgtggtcaacaacctggtgtcggggacgggctacgacctgtgcgtgctg
gccgtgtgggacgacgcggccacgacgctcacggccaccaacatcgtgggctgcgcgcag
ttcttcaccaaggccgactacccccagtgccagtccatgcacagccagctggtgggcggc
accatgatcctggccatcgggggcgtcatcgtggccacgctgctggtcttcatcgtcatc
ctcatggtgcgctacaaggtctgcaaccacgaggcccccggcaagatggcggcggccacc
gtcagcaacgtgtactcgcagaccaacggggcccagcccccgcctctgggcggcccgggg
ggcggcctgggcggcggcggcgtgcccgccgggccgcccctgcaggccgcgcccaaggtg
gtggtgaggaacgagctgctggacttcagcgccggcctggcccggggcggcgactcctcc
tcctcctccagctccctgggcagcggggaggccgcggggctgggccggggcccctggagg
ctgccgccccccgccccccgctccaagcccaacctggaccgcttgatgggagccttcgcc
tccctggacctcaagagtcagaggaaggaggagctgctgggctccaggactccagcgggc
agagggtcggggacgtcggccaggggccgccactcagaccgcgagccgctgctggggccc
ccggccgtgcgcgcccggagcctgctccccctgcccctggagggcaaggccaagcgcagc
cactccttcgacatgggggattttgccgcggccgcgggcggggttggggttgcccccggc
ggctacagcccccctcggagggtctcgaacatctggacgaagcgcagcctctctgtcaac
ggcatgctcttgccctttgaggagagtgacctggtgggggcccgggggaccttcggaagc
tcggagtgggtgatggagagtactgtgtag
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