KEGG   Perognathus longimembris pacificus (Pacific pocket mouse): 125352277
Entry
125352277         CDS       T08928                                 
Name
(RefSeq) ubiquitin-60S ribosomal protein L40-like
  KO
K02927  ubiquitin-large subunit ribosomal protein L40e
Organism
plop  Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop03010  Ribosome
plop04120  Ubiquitin mediated proteolysis
plop04137  Mitophagy - animal
plop04140  Autophagy - animal
plop05012  Parkinson disease
plop05022  Pathways of neurodegeneration - multiple diseases
plop05167  Kaposi sarcoma-associated herpesvirus infection
plop05171  Coronavirus disease - COVID-19
Brite
KEGG Orthology (KO) [BR:plop00001]
 09120 Genetic Information Processing
  09122 Translation
   03010 Ribosome
    125352277
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    125352277
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    125352277
   04137 Mitophagy - animal
    125352277
 09160 Human Diseases
  09172 Infectious disease: viral
   05171 Coronavirus disease - COVID-19
    125352277
   05167 Kaposi sarcoma-associated herpesvirus infection
    125352277
  09164 Neurodegenerative disease
   05012 Parkinson disease
    125352277
   05022 Pathways of neurodegeneration - multiple diseases
    125352277
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03011 Ribosome [BR:plop03011]
    125352277
   04121 Ubiquitin system [BR:plop04121]
    125352277
Ribosome [BR:plop03011]
 Ribosomal proteins
  Eukaryotes
   Large subunit
    125352277
  Archaea
    125352277
Ubiquitin system [BR:plop04121]
 Ubiquitins and ubiquitin-like proteins
  Ubiquitins
   125352277
SSDB
Motif
Pfam: Ribosomal_L40e ubiquitin Rad60-SLD Ubiquitin_2 Rad60-SLD_2 DUF2604 TBK1_ULD Ubiquitin_5 Dsc3_N UBL_UBAC1 OTU1_UBXL
Other DBs
NCBI-GeneID: 125352277
NCBI-ProteinID: XP_048203350
LinkDB
Position
6:36278219..36278738
AA seq 128 aa
MQIFVKTLTGKTITLEVEPSHTIDNVKAKIQDKESIPPDQQRLIFTGKQLEDGRTLSDYN
IQKESTLHLVLGLRGGIIEPSLRQLAQKYNCDKMICPKCYARLHPRAINCRKKKCGHTNN
LCPKKKVN
NT seq 387 nt   +upstreamnt  +downstreamnt
atgcagatcttcgtgaagaccctgaccggcaagaccatcaccctcgaggtcgagcccagc
cacaccatcgacaatgtcaaagccaaaatccaggacaaagagagcatcccacctgaccag
cagcggctgatatttactggcaagcagctggaggatggccgcaccctctcagactacaac
atccagaaagagtccaccctgcatttggtgcttggccttcgaggtggcatcatcgagccc
tctctgcgccagcttgcacagaagtacaactgcgacaagatgatctgccccaagtgctat
gcccgcctgcacccccgtgccatcaactgccgcaagaagaagtgtggccacaccaacaac
ctctgccccaagaagaaggtcaattaa

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