Perognathus longimembris pacificus (Pacific pocket mouse): 125352339
Help
Entry
125352339 CDS
T08928
Symbol
Tmc2
Name
(RefSeq) LOW QUALITY PROTEIN: transmembrane channel-like protein 2
KO
K21988
transmembrane channel-like protein
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
125352339 (Tmc2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
plop02000
]
125352339 (Tmc2)
03037 Cilium and associated proteins [BR:
plop03037
]
125352339 (Tmc2)
Transporters [BR:
plop02000
]
Other transporters
Pores ion channels [TC:
1
]
125352339 (Tmc2)
Cilium and associated proteins [BR:
plop03037
]
Other cilia and associated proteins
Stereociliary proteins
125352339 (Tmc2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TMC
TRAP_beta
NCA2
Motif
Other DBs
NCBI-GeneID:
125352339
NCBI-ProteinID:
XP_048203390
LinkDB
All DBs
Position
6:complement(64908432..64947475)
Genome browser
AA seq
887 aa
AA seq
DB search
MSHQLKSLEKEGDRSRRRPSKKRTPKTEGSRAQHGVQPSQKERAGGSPRPGSSRRKPSER
PERRSRPEGLRRLERISVRERTCEGRRKRDGRTXLQEQRTRSRKEKEVLGKGLKKPRSSS
LVSSTSSDESLSEEELARILEQVEEKKKLIATMRNKPWPMAKKLMELREAQAFVENYEGA
LGKGKGKRLYACRMQMAKKWVKFKRDFGNFKTQCIPWEMKIKDIESHFGSSVASYFIFLR
WMYGVNLVLFGLIFGLVIIPEVLMGVPYGSIPRKTVPRAEEAKAMDFSVLWDFEGYIKYS
ALFYGYYNNQRTIGWLRYRLPMAYFMVGVSVFGYSLMIVIRSMASNTQGSTGEGENDNFT
FSFKMFTSWDYLIGNSETADNKYASITTSFKESIVDEQESNKEENVHLTRFLRVLANFLI
ICCLCGSGYLIYFVVKRSQEFSKMQNVSWYERNEVEIVMSLLGMFCPPLFETIAALENYH
PRIGLKWQLGRIFALFLGNLYTFLLALMDDVHLKLSNEETIKNITQWTLFNYYNSSGWND
SVPRPPLHPADVPRGSCWETAVGIEFMRLTVSDMLVTYITILVGDFLRACFVRFMNHCWC
WDLEAGFPSYAEFDISGNVLGLIFNQGMIWMGSFYAPGLLGINVLRLLTSMYFQCWAVMS
SNVPHERVFKASRSNNFYMGLLLLVLFLSLLPVAYTIMSLPPSFDCGPFSGKNRMYDVLQ
ETIENDFPTFLGKIFAFLANPGLIIPAILLMFLAIYYLNSVSKSLSRANTQLRKKIQALR
EIEKSHKSVKRKASNSEDIPKHSPQNDTQLQLTKEEPTLPSASQSQTPDKKTGSTATSSS
ARKIPQPTSRHFPGPQPLGVKPEAGQSQSQTHPFRSATGKSVRRTPR
NT seq
2664 nt
NT seq
+upstream
nt +downstream
nt
atgagccatcagctaaagagcctggagaaggaaggagacagatcgaggaggagaccctca
aagaagcggactcccaaaaccgagggttcacgggcccagcatggagtccagcccagccag
aaggagagggctgggggcagccccaggcctgggtcttcccggaggaagccctcggagcgc
ccagagcgcaggagccggccagaggggctacgccgactagagcggatctcagtgcgggaa
aggacctgcgagggaaggaggaagagagatgggaggactntccttcaggagcagagaaca
cgctcgaggaaggaaaaggaggttctagggaaggggctgaagaaacccaggtcatcttcc
ttagtctccagtacttctagcgatgagtccctatctgaggaagaattggcccggatcctg
gagcaggtggaagaaaaaaagaagctcatcgccaccatgcggaacaagccctggcccatg
gcaaagaagctgatggaacttagggaggcccaagctttcgtggagaactatgaaggagcc
ttgggaaaggggaagggcaagaggctctatgcctgcagaatgcagatggcgaagaaatgg
gtcaagtttaagagagactttggtaatttcaagactcaatgtatcccctgggaaatgaag
atcaaagacattgaaagtcactttggctcttctgtggcgtcctatttcatcttcctccgg
tggatgtacggagtcaaccttgtcctttttggtttaatatttggtttagtgataattcca
gaggtgctgatgggtgtgccctatggaagcatccccaggaagactgtgcctcgggctgag
gaagcaaaggccatggacttctctgtcctttgggattttgagggctacatcaagtattct
gccctcttttatggctactacaacaaccagaggactattgggtggctaaggtacaggctg
cccatggcttattttatggtgggggtcagcgtgttcggctacagcctgatgattgtcatt
agatcgatggccagcaatacccaggggagcacaggcgagggagagaatgataacttcacc
ttcagcttcaagatgttcaccagctgggactacctgattgggaattcagagacagcagac
aacaaatatgcctccattactaccagcttcaaggaatcaatagtggatgaacaagagagt
aacaaagaagaaaatgtccatctgacaagatttcttcgtgtcctggccaactttctcatc
atctgctgcttgtgtgggagtggataccttatttactttgtagtgaagcgatcccaggaa
ttctccaaaatgcagaatgtcagctggtacgaaaggaatgaggtggagattgtgatgtct
ctacttgggatgttttgccctcctctgttcgaaaccattgctgccctagagaattaccac
ccacgcattgggctgaagtggcagctggggcgcatcttcgccctcttcctgggaaaccta
tacacgtttctcttggccctgatggatgatgtccacctcaagctttctaatgaagaaaca
ataaagaacatcactcaatggaccctgtttaactattacaattcttcaggttggaatgac
agtgtcccccggccacccttgcaccctgcagatgtgccccggggttcttgctgggagaca
gccgtgggcattgaattcatgaggctgacagtgtcggacatgctggtaacctacatcacc
atcttggtgggggatttcctgcgggcttgtttcgttcggttcatgaatcactgctggtgc
tgggacctggaggctggttttccttcatatgctgaatttgatattagtggaaatgtgctg
ggtttgatcttcaatcaaggaatgatctggatgggctccttctatgctccaggattgctg
ggcattaatgtcctacgcctgctgacctccatgtacttccagtgctgggcagtgatgagc
agcaacgtgccccatgaacgcgtgttcaaagcctcccggtctaacaacttctacatgggc
ctgctgctgctagtgctcttcctcagcctcctgccggtggcctacaccatcatgtccctc
ccaccttcctttgactgcggtccattcagtgggaaaaacagaatgtacgacgtcctccag
gagaccattgaaaatgatttcccaaccttcctaggcaagatctttgctttcctcgccaat
ccaggcctgatcatcccagccatcctgctgatgttcctggccatctactacctgaactca
gtttcaaaaagcctttcccgagctaatacccagctgaggaagaaaatccaagcacttcgt
gaaattgagaagagccacaaatctgtcaaacgtaaagccagcaattcagaggacatacca
aaacacagtccccaaaatgacacccagctgcaactcaccaaagaagagcccacactgccc
tctgccagccaaagccaaaccccggacaagaagacaggtagtactgcaacctccagttct
gccaggaagatcccacagccaacctccagacatttccctggacctcagcctctgggggtc
aaaccagaggctggacaatcccagtctcaaacccaccccttcaggtcagccactggaaag
agtgttcggaggactcctcgctga
DBGET
integrated database retrieval system
