Perognathus longimembris pacificus (Pacific pocket mouse): 125352376
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Entry
125352376 CDS
T08928
Name
(RefSeq) contactin-associated protein-like 3
KO
K24337
contactin associated protein-like 3/4
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
plop04990
]
125352376
Domain-containing proteins not elsewhere classified [BR:
plop04990
]
Laminin domain-containing proteins
Laminin G domain-containing proteins
125352376
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Laminin_G_2
Laminin_G_1
F5_F8_type_C
Laminin_G_3
EGF
F5_F8_type_C_2
EGF_2
Motif
Other DBs
NCBI-GeneID:
125352376
NCBI-ProteinID:
XP_048203426
LinkDB
All DBs
Position
1:102494765..102623965
Genome browser
AA seq
1322 aa
AA seq
DB search
MASAAAARASLLLLLLLLRLLTQSRNPGVAGNPYNNNNQRNIQQLKGNAGQNDTEILCQQ
YNHQDDCDTPLASALPWSAFSSSSELSSSHGPGFAKLNRRDGAGGWTPFVSNKYQWLQID
LGERMKVTAVATQGGYGSSDWVTSYLLMFSDGGRNWKQYRQEDSISGFPGNTNADSVVHY
TLQPPFEARFLRFLPLAWNPKGRIGMRIEVYGCAYRSEVAHFDGHSALLYRFDEKSLRPM
RDVISLKFKAMQSNGILFYREGPHGNHITLELIKGQLVFCFNSGNANLSSTKAPMTLTLG
SLLDDQHWHSVLLELFNTHVNFTLDKHTHHFRAKGEHTSLDLHFEISFGGITVPGGPLTV
SHKMFHGCLENLYYNGVDLIELAKKQKPQILVMGNISFSCPQPQTVPMTFLSSRSYLSLP
GNSGKDNVSVTFQFRTWNKVGQLLFGELWRGSGSFVLFLKDGKLTLSLSQPGQSLKNITS
GAEINDGQWHSVSLSALWSHMSLEVDDRLAVQPLAHMPIHSGDTYYFGGCPHNSSGSGCE
NPLRGFQGCLRLISIGDKAVDPILVQQGALGSFSDLQIDSCGIADRCLPSYCEHGGACSQ
SWDTFSCDCEGTGYTGDTCHSSIHEQSCEAHRHTGSPSGLYSIDVDGSGPLGPFLVYCNM
TDAAWMVVQPSGPDVVMVRNWPQGRARSATFTYAASAGQLRAAVHMAEHCEQQLALRCRT
TQLSDSPGGSPLSWWAGRTNENHTYWEGSQPNAQKCTCGLEGNCIDSQYQCNCDADQNEW
TSDTILLSQKEHLPVTRIVMKDTVRPHSEAAYTLGPLLCQGDKSFWNSASFNTETSYLHF
PTFHGELTADVHFFFKTTVSSGVFLENLGITDFIRMELRAPTEVTFSFDVGNGPCEVTVQ
SPTPFNDNRWHRVRAERNIKGASLQVDQLLEKIQPVPADGHIRLQLNSQLFIGGTASRQR
GFLGCIRGLQLNGVALDLEGRATVTPGVEPGCAGHCSSYGHLCHNGGRCREKLTGIECDC
ASSAFDGPFCSQEISAYFETGSSMIYNFQEHYNLNGNTSSLASSLPKDVSLSSDSITVSF
RTTQTPSLLLYVNSFSEEYLSIFLANNGSLQIRYRLDRHRDPDAFHFDFKNMADGYLHQL
KINRKEAMVSVEVNHSAKRKVVLSSGTEFNAVKSLFLGKVLEPLDMDPDTRRAATHGFTG
CLSAVRFGDAAPLKAALRPGDPVWVSIRGRVTPASRCMEGAAPGSPARELAPRLAGGAGH
FGPSDEGEPFLNANGSDSGVIGGVIAVVVFILLCISAIALRIYQQRKSHKENESKVSRNE
EC
NT seq
3969 nt
NT seq
+upstream
nt +downstream
nt
atggcctccgccgctgccgccagagcttccctcctcctcctcctgctgctgctgcggctg
cttactcaatctaggaacccaggagtagcaggaaatccatacaataacaataaccaaaga
aatatccagcagcttaaagggaatgccggtcaaaacgacactgagattctgtgtcagcag
tacaatcatcaagatgattgtgacactcctctggcctctgccttgccttggtcggccttc
agcagctcctcggagctgtccagcagccatggccctgggtttgccaagcttaatcgaaga
gatggagctggtggctggactccatttgtgtcaaataaatatcagtggctacagattgac
cttggagaaaggatgaaggtcactgccgtggccacacagggaggatatgggagctctgac
tgggtgaccagctacctcttaatgttcagcgatggtgggaggaactggaagcaatatcga
caagaagacagcatctcgggatttccaggaaacactaatgcagacagcgtcgtgcactac
acactccagccacctttcgaagccaggtttctgcgcttcctgcccttggcctggaacccc
aagggcaggattgggatgcggatcgaagtgtacggatgtgcatatcgatccgaggtggct
cattttgatggacacagtgccctcctctacagatttgatgaaaaatcccttagaccaatg
agagatgttatttctttgaaatttaaagccatgcagagcaatgggattctgttctaccga
gaagggccacatggaaaccacatcactctggaactaattaaaggacaacttgtcttttgt
tttaattcaggcaatgcaaacctgtcctctactaaagcgcccatgaccctcaccttgggc
agcctgctggatgaccagcactggcactcggtcctcctggaactcttcaacacccacgtc
aacttcaccttggacaagcacactcatcacttccgtgcaaagggagagcacacttcctta
gaccttcactttgagatcagctttggaggaattacagtacctggaggaccactgactgtc
tcacataaaatgtttcatggatgtttggaaaatctttattataatggagtggatctaatt
gaattagccaagaaacagaagccacaaatccttgttatgggaaatatctccttctcatgt
ccacaaccacagacggtccccatgacttttttgagctccaggagctatttgtctctgcct
ggcaactctgggaaggacaatgtatctgtcacttttcagtttcgaacatggaacaaagtg
ggacagttgctttttggtgaactttggcgtggttcaggaagttttgtcctgtttcttaag
gatggaaaactcacactgagtctctcacagccgggccagtcgttgaagaacatcacatca
ggtgcagagatcaacgacggccagtggcattctgtgtctttgtctgctctgtggagccat
atgagcttggaagttgatgatcgcttagctgttcaacccctggcccacatgcccatccat
tcaggggacacctattattttggaggctgtccccacaacagctctggctctggatgtgaa
aatcccctgagagggtttcagggctgcctgaggctcatctccattggcgacaaagcggtg
gatcccatcttggtacagcagggggcgctggggagtttcagcgacctccagatagattcc
tgtggcatcgcagacaggtgtttgcccagctactgtgagcatgggggtgcgtgctcccaa
tcctgggacactttttcctgtgactgtgaaggcacaggttatactggagacacctgccat
tcctccatccatgagcagtcgtgtgaggctcacaggcacacagggagcccttctgggctc
tactccatcgatgtggatggaagtggccctctgggaccatttcttgtgtactgcaatatg
acagatgctgcatggatggtggtgcaacccagtggccctgatgtggtgatggtcagaaac
tggccccaagggcgcgcgcgctcagcgaccttcacctatgcagccagtgcagggcagctg
cgggccgccgtgcacatggccgagcactgcgagcagcagttagctctgcgctgtcgcacc
acacagctctccgactccccaggtggatccccactgagctggtgggctggaaggaccaat
gagaatcacacatactgggaaggttctcagcctaatgctcaaaagtgcacttgtggatta
gagggcaactgcattgattcccaatatcagtgcaactgtgatgctgaccagaatgaatgg
accagtgatacaattctcctttctcagaaggagcacttgcccgtcactcggattgtgatg
aaggacacagtccgaccacattctgaagctgcttatacactggggcctctgctctgccag
ggtgacaaatcattttggaattcagcttccttcaacactgagacgtcataccttcatttc
cctactttccacggagagctgactgctgacgtccatttcttctttaagactaccgtgtcc
tctggtgtgttcttggaaaacctgggaatcacagactttatcaggatggagctgcgtgct
cccacagaagtgaccttttctttcgatgtgggaaacggaccttgtgaagtcacagtgcag
tcacccactccttttaatgacaatcggtggcaccgtgtgagagcagaaaggaacattaaa
ggagcatctcttcaagtggatcagctcctcgaaaagatacagcctgtcccagctgatggg
cacatccgcttacaactcaacagccagctcttcattggtgggacggccagcaggcagagg
ggtttcctgggctgtatccggggcctgcagctgaatggggtggccctggacctggaaggg
agagccacagtgacaccaggagtggagccggggtgcgcgggccactgcagcagctatggg
catctgtgccataatggggggagatgccgagaaaaactcacaggcatcgagtgtgactgt
gcctcctctgcctttgacgggcccttctgctcacaagagatttctgcttattttgagacc
ggctcttcaatgatttataattttcaagagcattataacttaaatggaaacaccagttcc
ttggcttcttcattacctaaagatgtttcattatcaagtgactccatcactgtgagcttc
cggaccactcaaactccaagtttattactttatgtgaactctttctctgaggaatacctt
tccattttcctggccaacaatggaagtttgcagattaggtacaggctggacagacatcga
gatcctgatgctttccactttgactttaaaaacatggctgatggataccttcaccagctg
aagattaacagaaaggaagccatggtttctgtagaggttaaccatagtgcaaagagaaaa
gtcgttttgtcctcagggacagaattcaatgccgtcaaatctctcttcttgggaaaggtt
ttagaacccctggacatggaccctgacacgcggagggcagcgacacatggcttcacaggc
tgtctctctgcggtgcgctttggggatgctgcccccctgaaggcggctctgcgtcctggg
gacccagtgtgggtctccatccggggccgggtgaccccagcatcccgttgcatggaaggg
gcggcgcccggctccccagcgcgggaactggctcccaggctcgccggcggcgcaggtcat
tttgggccatcggatgagggcgagcctttccttaatgcaaacggcagtgactctggggtc
attggaggtgtgatagctgttgtggtcttcattttgctgtgcatctccgccatagcccta
cgcatttaccaacagagaaagtcacataaagaaaacgagtcaaaagtctcgagaaatgaa
gagtgttag
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