Perognathus longimembris pacificus (Pacific pocket mouse): 125352391
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Entry
125352391 CDS
T08928
Symbol
Matn4
Name
(RefSeq) LOW QUALITY PROTEIN: matrilin-4
KO
K19467
matrilin
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
plop04990
]
125352391 (Matn4)
Domain-containing proteins not elsewhere classified [BR:
plop04990
]
Von Willebrand domain-containing proteins
VWA domain-containing proteins
125352391 (Matn4)
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Gene cluster
GFIT
Motif
Pfam:
VWA
FXa_inhibition
VWA_2
cEGF
EGF_CA
EGF
Matrilin_ccoil
EGF_3
hEGF
Motif
Other DBs
NCBI-GeneID:
125352391
NCBI-ProteinID:
XP_048203437
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Position
6:complement(76491927..76501135)
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AA seq
624 aa
AA seq
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MRGRLCWSLLTLLLLLQAWETQLQSAGPRCHTGPLDLVFVIDSSRSVRPFEFETMRKFLV
GLLHNLDVGFNATRVGVIQYSSQVQSVFSLGSFSRREDMEHAIRALVPLAQGTMTGLAIQ
YAMNVAFSEAEGARPLEQRVPRVAVIVTDGRPQDRVAEVAAQARXRGIEIYAVGVQRADV
GSLRAMASPPLDKHVFLVESFDLIQEFGLQFQGRLCGGDLCAERGHGCQHQCVNAPGTFY
CACNSGYKLAADNKSCFAIDLCAEGTHGCEHHCVNFPGSYYCRCRPGFALQQDQRSCRVI
DHCSFGNHSCQHECVSTLGGPRCRCREGHDLLSDGRSCQVRDLCNVVDHGCEFQCVSQGL
SYHCLCPEGRRLQADGKSCDRCREGHVDLVLLVDGSKSVRPQNFELVKRFVNQIVDFLDV
SPEGTRIGLVQFSSRVRTEFPLGRYGTAAEVKQAVLAVEYMERGTMTGLALRHMVEHSFS
EAQGARPRALNVPRVGLVFTDGRSQDDISMWAARAKEEGIVMYAVGVGKAVEEELREIAS
EPAELHVSYSPDFDTMTHLLENLRGSICPEEGIGAGTELRSPCECASLVEFQGRALGALE
SLTQNLAQLTARLEDLEHQLAKQK
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
atgaggggccgcctttgctggtcactgctgacactgctgctccttcttcaggcctgggaa
acccagctccagtctgcaggtcccaggtgccacactggacccctggatttggtgtttgtg
attgacagctcccgcagcgtgcgccccttcgagttcgagaccatgcggaagtttctcgtg
ggcctgctccacaacttggatgtggggttcaacgccacccgcgtcggtgtgatccagtat
tccagccaagtgcagagcgtcttttcgctgggctccttctctcgccgggaggacatggaa
cacgccatccgcgccctggtgccgctagcgcagggcaccatgaccggcctggccatccag
tacgccatgaacgtggccttcagcgaggccgagggcgcgcgcccgctggagcagcgcgtg
ccccgcgtggcggtcatcgtgaccgacgggcggccccaggaccgcgtggccgaggtggcg
gcgcaggcgcgcngccgaggcatcgagatttacgcggtgggggtgcagcgcgccgacgtg
ggctccctgcgcgccatggcgtcccccccgctggacaagcacgtcttcctggtggagtcc
ttcgaccttatccaagagtttggcctgcagttccagggccggctgtgcgggggggatctg
tgtgctgagcgaggacatggctgccagcaccaatgtgtcaatgcacctggaacattctac
tgtgcctgcaactctggctacaagctagcagcagataacaagagctgttttgccattgac
ctgtgtgctgaagggacccacggctgtgagcaccactgtgtcaatttccctggctcctat
tactgtcgttgccgccctggctttgcccttcaacaggaccagagaagctgcagggtcatt
gaccactgtagcttcgggaaccacagctgccagcatgaatgtgttagcaccctcggaggg
ccccgttgccgctgcagagagggccatgacctgctctcggatggcaggagctgccaggtc
agggacctttgcaatgttgtggaccatggttgtgagttccagtgtgtgagccagggcctc
tcctaccactgcctgtgccctgaggggcggcgacttcaggcagatggcaagagctgtgac
cggtgccgggaaggccacgtggatctcgttctgctggtggatggctccaagagcgtgcgc
ccccagaacttcgagctggtgaagcgcttcgtgaaccagatcgtggacttcctagacgtg
tcccccgagggcacccgcatcgggctggtgcagttctccagccgcgtgcgcaccgagttc
ccgctgggtcgctacggcaccgccgctgaggtgaagcaggccgtcctggctgtggagtac
atggagcggggtaccatgacaggcctggcgctgcgccacatggtggagcacagcttctcc
gaggcgcagggcgcgcgccctcgagccctcaacgtgcctcgcgtgggcctggttttcacc
gacggccgttcccaggatgacatctccatgtgggcagcacgtgccaaggaggaaggcatc
gtcatgtacgcggtgggcgtgggcaaggcggtggaggaggagctgagggagatcgcctcc
gagccggcggagctgcacgtgtcctactccccggacttcgacaccatgacgcacctgctg
gagaacctcagaggcagcatctgccccgaggagggcatcggcgcgggcacggagctgcgg
agcccctgcgagtgcgcgagcctcgtggagttccagggccgcgcgctgggggcgctcgag
agcctgacgcagaacctggcccagctgaccgcgcgcctggaggacctggagcaccagctg
gccaagcagaagtga
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