Perognathus longimembris pacificus (Pacific pocket mouse): 125352476
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Entry
125352476 CDS
T08928
Name
(RefSeq) contactin-associated protein-like 3
KO
K24337
contactin associated protein-like 3/4
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
plop04990
]
125352476
Domain-containing proteins not elsewhere classified [BR:
plop04990
]
Laminin domain-containing proteins
Laminin G domain-containing proteins
125352476
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Laminin_G_2
Laminin_G_1
F5_F8_type_C
Laminin_G_3
EGF
EGF_2
Motif
Other DBs
NCBI-GeneID:
125352476
NCBI-ProteinID:
XP_048203563
LinkDB
All DBs
Position
1:complement(103454027..103540565)
Genome browser
AA seq
1217 aa
AA seq
DB search
MKVTAVATQGGYGSCNWVTSYLLMFSDSGMNWKQYRQEESIWRFPGNTNADSVVRHSLQL
SFETRFLRFLPLAWNPQGRIGMRVEVYGCAYSSEVVRFDGISSLLYTFNQKSTSPTKEVI
SLKFKSRKSDGILFHRQGQNGKSFTLELAQGKLVLSLNSGEANVPSLDARAGLSLGSLLD
DQHWHSLLLELHSTHGSLTVDKHTRLFQAQPGSSYLDHDYKISFGGILGHGKLSTFPHKN
FDGCFENLFYNGVDITYLTKEHKSQILLVGNVSFSCSQPQTVPVTFLSSRSYLALPHTTE
EDTVSITFQFRTWNRAGLLLTSQLPHRSGALVLFLDDGKLKLSLSPHGLPAKTIIAGDGL
NDGQWHSVSLAAKGNHMSMKVDSNAASATHTLPRWMGPSDSYYFGGCPENISGCGSSLGG
FQGCLRLISIGDKAVDPISVQQGALGSFSDLQIDSCGIIDRCLPSYCEHGGKCFQSWATF
SCDCTHTGYMGATCHSSLYERSCEALKYLGEDSSGLYYIDTDGSGPLGPALVYCNMTGTV
WTSLQHNGSHLVRVKGLQGDRPQPVLFKYSTSMDQLQAIVSHADHCHQKLAFHCKKPRLS
EHHGGTPLSWWARRTIETHMYWGGSLPDAQKCTCGLEGNCVDSRYHCNCDADQNERTSDT
VVLSHKEHLPVTQVVMTDTNRPHYETAYSLGPLLCRGDNSFWNSASFNTEISYLHFPTFH
GELSADLSFFFKTTASSGVLVENLGITDFIRLELRAPAEIVFSFDVGNGPCEVIVQSPTP
LNDNRWHRVKAERNVKEATLQVDQLPQKTQLAPADGPVRLQLSSQLFVGGTADRQRGFLG
CIRSLQLNGVALDLEGRATVTPGVEPGCAGHCSSYGHLCHNGGRCREKHAGIECDCASSA
YDGPFCSQEISAYFETGSSVIYNFQECDNNTFSNSSSSLADLSHEELTLTREIATLSFRT
TGVPSLLLYVSSFFEEHLAVVLTPHGSLQVKYKLDRHKEPDVLDFDFKNLADGQLHHLKI
DRAASVVSVEVDQYARKQAILSSGAEFSAVRCLVLGATSELPGADTDTQLAATHGFTGCL
SAVSFGGITPLKAALRPGGAAGVTILGSVIAATSCMEGARPGAPAWELTPSLIRGTGSGS
SNEEKPLVNADTKDSAAIRSTIAVVVFILVCLAAIAVHIYRQRWLYHKNKDDTEKAGAEA
ETSLKSELTVHNIVSEN
NT seq
3654 nt
NT seq
+upstream
nt +downstream
nt
atgaaggttacagctgtagccacccagggaggatatggaagctgtaattgggtaaccagc
tatctcctgatgttcagtgacagcgggatgaactggaagcaatatcgacaagaagaaagt
atctggagattcccaggaaacaccaatgcagacagtgtggtgcgacacagtcttcagctg
tccttcgaaaccaggtttctgcgcttcctccccttggcctggaacccccagggcaggatc
gggatgcgtgttgaagtgtatggatgtgcatatagctcagaagtggttcgttttgatgga
ataagctctttgctgtacacctttaatcagaaatccacaagtccaacaaaggaagtaatt
tctctgaaatttaaatccaggaagagtgatgggattctgtttcataggcaaggacaaaat
ggcaagagttttaccctggaattagctcaaggaaaacttgtcctgtcccttaattcaggt
gaggctaacgtgccctcccttgatgcacgagcaggcctcagcctgggcagccttctggat
gaccagcattggcattccttgctcctggagctgcacagcacgcatggcagcctcactgtg
gacaagcacactcgacttttccaagcacagccaggatccagctatctggatcatgattat
aagatcagctttggagggattcttgggcatggaaaattgtcaacattcccacacaaaaac
tttgatggatgttttgaaaatctcttctataatggagtggatatcacttatctgaccaag
gaacacaaatcacagattctcctcgtgggaaatgtgtcattctcctgttcacaacctcaa
actgtccctgtgacttttctgagctccagaagttacctggctttgccacacaccactgaa
gaggacaccgtgtctataactttccaatttcggacatggaacagagcagggctcttgctg
acaagtcagttacctcacaggtcaggggctcttgtcctctttcttgatgatgggaaactc
aagctgagcctctccccacatggacttccagcaaaaaccatcattgcaggtgatggatta
aatgatggtcagtggcattcagtgtccttagctgctaaaggaaatcacatgagcatgaag
gtggacagcaatgcagcatctgctactcacaccctgcctagatggatgggccccagtgat
tcctattattttggaggctgtccagaaaacatctctggatgtgggagctccctgggaggg
ttccagggctgcctgagactcatctccattggtgacaaagcggtggatcccatctctgta
cagcagggggcgctggggagtttcagtgacctccagatagattcctgtggcattatagac
aggtgtttgcccagctattgtgaacatgggggtaaatgtttccagtcatgggctaccttc
tcctgtgactgcacccatactggctacatgggagccacctgccattcctctctgtatgag
agatcttgtgaagcccttaagtacttgggagaagattcttcaggactctactacatcgac
acagatggaagtggcccactgggaccagctctggtgtactgcaacatgacaggtactgtg
tggacctcattgcagcacaatggttcccacctagtcagagtcaaaggcttgcaaggagat
cgcccacagccagtgcttttcaagtacagtaccagcatggaccagctgcaggccatagtc
agccatgcagaccactgccatcagaagctggctttccactgcaagaagcccaggctctca
gagcaccatggtggaaccccattgagctggtgggctagaaggaccattgagactcacatg
tactggggaggttctctgcctgatgctcaaaagtgcacttgtggattagagggcaactgt
gttgattcccgataccactgcaattgtgatgctgaccagaatgaacggaccagtgacaca
gtagtcctctcccataaggaacacctaccggtcactcaggttgtgatgacagacacaaac
agaccacactatgaaacagcatattccttggggcctctcctctgccgaggggacaattca
ttttggaattcagcctccttcaatactgagatttcatatcttcattttcctaccttccat
ggggagctcagtgctgatctgtccttcttttttaagacaacagcttcctcaggggtgctt
gtagaaaacctggggatcacagatttcatcaggctggagctgcgtgctcctgcagaaatc
gttttttcctttgatgtggggaatggaccttgtgaggtcatcgttcagtcacccactccc
cttaatgacaaccgatggcaccgtgtgaaggctgagagaaatgtgaaagaagccacactc
caagtggaccagctccctcagaagacacagcttgccccagctgatggacctgttcgcttg
cagctcagcagccagctctttgtggggggaacggctgacaggcagagaggtttccttggc
tgcatcaggtccctgcagctgaatggggtggccctggacctggaagggagagccacagtg
acaccgggagtggagcctgggtgcgcaggccactgcagcagctatggacatctgtgccat
aatggggggagatgccgagaaaaacacgcggggattgagtgtgactgtgcctcctctgct
tatgacgggcccttctgttcacaagagatttctgcatactttgaaactggatcatcagtg
atctacaattttcaagaatgtgacaataacaccttcagtaacagctccagctccttagca
gatttatctcatgaagagctgaccctgaccagagaaattgcgaccctgagcttccgaacc
acaggggtgcccagtttactgctctacgtgagctctttcttcgaggaacatcttgcagtt
gtcctcactccacatggaagtttgcaggtaaagtacaagctggacagacacaaagagcct
gacgtcttggactttgattttaaaaacctcgccgatgggcagcttcaccacttgaaaatc
gacagagcagcatctgtggtctctgtagaggttgaccagtatgcaaggaaacaagctatc
ctgtcatcaggggcagaattcagtgctgtcagatgccttgtgttgggagcaacttcagag
ctcccaggagctgacacagacacacaactggcagcaacacatggcttcactggctgcctc
tcagcagtgagctttggtggcattactccactgaaggcagctctgcgcccaggaggagct
gccggagtcaccatccttggctcagtaattgctgctaccagctgcatggagggggcaagg
cctggcgccccagcgtgggaactgacacccagcctcatcaggggcacaggttctggatca
agcaatgaagaaaaacccttagttaatgcagatacaaaggactctgctgccatcagaagt
accatagcagtagtggtatttatcttggtttgccttgctgcaatagctgtgcacatttat
cgacaaagatggctgtaccacaaaaacaaagatgatactgaaaaagctggagcagaggct
gaaacttctctgaaaagtgagctcactgtgcacaacatagtcagtgagaattag
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integrated database retrieval system
