Perognathus longimembris pacificus (Pacific pocket mouse): 125352488
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Entry
125352488 CDS
T08928
Symbol
Efhc1
Name
(RefSeq) EF-hand domain-containing protein 1
KO
K23029
EF-hand domain-containing protein 1
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
plop03037
]
125352488 (Efhc1)
04812 Cytoskeleton proteins [BR:
plop04812
]
125352488 (Efhc1)
04990 Domain-containing proteins not elsewhere classified [BR:
plop04990
]
125352488 (Efhc1)
Cilium and associated proteins [BR:
plop03037
]
Motile cilia and associated proteins
Other motile cilia associated proteins
125352488 (Efhc1)
Cytoskeleton proteins [BR:
plop04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule-associated proteins (MAPs)
125352488 (Efhc1)
Domain-containing proteins not elsewhere classified [BR:
plop04990
]
EF-hand domain-containing proteins
Other EF-hand domain-containing proteins
125352488 (Efhc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DM10_dom
EF-hand_7
Motif
Other DBs
NCBI-GeneID:
125352488
NCBI-ProteinID:
XP_048203589
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All DBs
Position
6:complement(2721787..2739208)
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AA seq
640 aa
AA seq
DB search
MASHPVHGLPLLPGASFRDSTKTNFHRCQTLDYRNGYAVTRRPTVGIGGDRLQFNQLSQA
ELDELANTAPVITYGQPKRPPPPDFVPAHVAFDKKVLKFEAYFQEDVPMSMEEHYRIRQV
KIYYYLEDDSMSVVEPVVENSGVPQGKLIKRQRLAKNDVGEHYHWKDLNRGINITVYGKT
FRLVDCDRFTQDFLESQGIELNPPEKMALDPYTELRKQPVRKYVTPSDFDQLKQFLTFDK
QVLRFYAIWDDTDSLFGECRNYIIHYYLMDDTVEIREVHERNNGRDPFPLLMNRQRMPKV
LVKDAKNFPQCVLEISDQEVLEWYTAKDFIVGKTLTILGRNFFIYDCDPFTRKYYREKFG
IMDLPRIDVSKKEPPPAKKELPPYNGYGLVEDSAQNCFALIPKAPRKDVIKMLINDNKVL
RFLASLESPIAEDKDRRFIFSYFLATDMISIFEPPVRNSGIIGGKYLGRTRVVKPHSTAD
NPIYYSPSDLYIGAVIDVFGHRFTILDADEYVLKYMESHAAQYSPEALASAQRHLQRPEA
PAPGAGSEQAPEASPMPEMEALIGTLQKQLKGRACRDAICEAFHKHDAESSGCVPRALFF
NICGSLDVPVDDYLVKELIKMCSHGDGKIDYYNFVRIFSD
NT seq
1923 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcccaccccgtgcacggcctgccccttctcccgggcgcgtccttcagggactcc
acgaaaacaaactttcatcgatgccagacactggactataggaatggctatgcagttact
cgccgtcccacagttgggattggcggggaccggctccagttcaaccagctgtcccaggct
gaactggatgagttggccaacacggcaccagttataacttacggccagccaaagcggccc
ccacctccagactttgttcctgcacatgtggcttttgacaaaaaggttctgaagttcgag
gcgtatttccaagaggatgtccccatgtccatggaggagcactacaggatccgccaggtg
aagatctattactacctggaagatgacagcatgtccgtcgtggagcccgtggtggagaac
tccggggtccctcagggcaagctgatcaagcgccagcggctggccaagaacgacgtgggg
gagcactaccactggaaggacctcaaccgaggaatcaacatcaccgtttacggcaagact
ttccgcctcgtcgactgcgaccggttcacacaggattttttggaaagtcaaggaatcgaa
ctaaatccgcctgagaagatggctctggatccttacactgagctccggaaacagcctgtg
cggaagtacgtcaccccttccgacttcgatcagctcaaacagttcctaaccttcgacaaa
caggtcctccggttctatgccatctgggacgacaccgacagcctgtttggggagtgtcgc
aactatatcattcactactacctcatggatgacaccgtggagatccgcgaggtgcatgag
cggaacaacggcagagatcccttcccactcctgatgaaccgccagcgcatgcccaaggtg
ctggtgaaggacgcaaagaacttcccccagtgcgtgctggagatctccgaccaggaggtg
ctggagtggtacacggccaaagacttcatagtggggaagaccctcaccatcctcgggagg
aacttcttcatctacgactgcgacccattcacccgcaagtactacagagagaagttcggc
attatggacttaccccggatagatgtgagcaagaaggagccaccccctgcgaagaaggaa
ttgcctccctataacggctatggactagttgaagactcagcccagaattgctttgctctc
attccaaaagccccccgaaaagatgtgattaagatgctgataaatgacaacaaagtgctt
cgcttcctggcctccctggagtcccccatcgcggaggacaaggaccgccggttcatcttc
agttactttctcgctaccgacatgattagtatcttcgagcctcctgttcggaattccgga
atcatcgggggcaagtaccttggcaggacccgggtcgtgaagccgcactcgacagcggac
aaccccatctactacagccctagcgacctctacatcggggcggtcatcgacgtgttcggg
caccgcttcaccatcctggacgcggacgagtacgtgctgaagtacatggagagccacgcc
gcccagtactcgccggaggccctggcgtcggcgcagaggcacctgcagaggcccgaggcg
cccgcgcccggcgcggggagcgagcaagctccagaggcttccccgatgccggagatggaa
gcgctcatcggaaccctccagaagcaactgaaaggccgtgcgtgcagagacgccatctgc
gaagcgtttcacaagcacgacgcggagagctcgggctgcgtgccccgggcgctgttcttc
aacatctgcggctctctggacgtcccggtggacgactacctggtgaaggagctcatcaaa
atgtgctctcacggagacggcaagattgactactacaacttcgttcgtattttctccgac
taa
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