Perognathus longimembris pacificus (Pacific pocket mouse): 125352512
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Entry
125352512 CDS
T08928
Symbol
Tdrd6
Name
(RefSeq) tudor domain-containing protein 6 isoform X1
KO
K18405
tudor domain-containing protein 1/4/6/7
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
plop03036
]
125352512 (Tdrd6)
Chromosome and associated proteins [BR:
plop03036
]
Eukaryotic type
Gene silencing
piRNA pathway
125352512 (Tdrd6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TUDOR
SNase
SGF29_Tudor
Motif
Other DBs
NCBI-GeneID:
125352512
NCBI-ProteinID:
XP_048203614
LinkDB
All DBs
Position
6:complement(5076812..5093645)
Genome browser
AA seq
2157 aa
AA seq
DB search
MSWTPGLPPPGASLTLRVTFVDVHPDVIPVQLWGLVGQRREEYVRLSREIQEAAATRGPW
ALGGAPAAPGELCLVQVGLVWHRCRVVSRQAQESRVFLLDEGRTMAAGAGSLAPGRSEFF
HLPSEVLGCVLAGLAPAGGGGAGGGEPQTWAPGAVDFLSGLQGQELRGRVLDVLLPYRLV
LLEVPAVFQQMQELGLARQVPDGLFCFLLKRYLASVGKAASGTPVLPRVLPKPEPPGLDY
FYPQLQLGVTEPVVVTQVCHPHRIHCQLRSLSQEIRRLSESMAQAYRASPPAARGTGDES
AGAAAGPAGGGPGGGGGEEREESPDKPGSPCASCGLDGRWYRALLLETFRPQRCAQVLHV
DYGRKELVSCSSLRYLLPEYFRMPVVTYPCALYGLWDCGRGWSRSQVGDLKALILGQAVN
AKIEFYCSLEHAYYVTLYGEDGLNLNCAFGVQACCLADRFLRSSRGGGSDGEEDEEDEEE
EEAAAAAAAGAALLLPPSPPPAEEERDAFPPRALRSIRLRMNAFYDAQVEFVQSPSEFWI
RLRKHGRAFHRLARKMGSFYASASKLDGVVLRPEPDDLCCVKWKENGYFRATVTRLDGQS
VDVFLVDRGNSETVDWYDVRMLLPQFRQLPVLALRCALADIWPLGKSWSQEAISFFKKTV
LHKELVIHILDRQDHQYIIEILDESRTGEENISKVIAQAGYAKYQEFETQGNGPSPGQGA
GAFLAESHKAACSAQKVGEQRAKMENKTSSALETPSDPAMAAHVLAGQVVLEKEKGIPLG
SPPVPSFLSMKAADLCWKNELEVGTTVEVKVSCVENPSSFWCQLSKDTQGFRTLMCDIAD
YCENTPAPYQGITPACLAKRAESGKWSRALICGAPSSELVSVVFIDYGDKDTVPVRNIYA
MTNDFLTVRAQAFRCSLYNLIQPTGENPFVWDEKAVQAFSGFVNNAWQNNLELKCTIFAL
ASVQDAEPFNVVDLLTPFQSACHFLVEKRLARPVKLQKPLEASVRLHSYYYSTHDMKIGS
EEAVYITHVDDPWTFYFQLARNSSVLEQLSYSITQLSDVLLKLDTSPSVPGNLCLAQYTD
SNWYRGVIMEKDPNKVFFVDFGNIYVTNENLLPIPRDAYDVLLLPMQAVKCSLSDIPSHI
PEEVTTWFQETVLDKSLKALVVAKDPDGRLIIELYDDSIQINASINEKVGLLGCKNRIKK
KQKEGEAFFTSETPEEKHDTVKLSPTAYLSKSGESRLHGGEILGDACKPKMSSLCKEFRG
LQSPAKTSLFPQYQDPVENTNEPGFPLARVKKDIFEDAPLQTLRVEGTLPERRAGAPGNK
DLPRKLGELPKKMISPGLKTTVYVSHVNNISDFYVQLMEDEAEINQLSERLNNAQTLPQH
YTGPPLQSGNVICALFPEDNLWYRAVVRERQPNDFLSVQFIDYGNVSVVHATKTGRLEPA
NALLPGLCVHCSLRGLCVPDIIDCKEITTYFSQRTDEAQMECEFIKFQDRWEVILTDDRG
MIAEDVVNRYASIEKPRAGLATPIVKGDRSKSANRPDVDTSVFLNWYNPQMKALRAYATV
IDGPEYFWCQFANTEELQYLETEVQNAGKQILEWRNRIHSPQIGDPCIVKYREDGHYYRA
LITSICEDDFLTVRLVDFGNMEDCVDPKAVWNIPGELLMVPMQAFPCCLAGFHVSGGACP
QDGNDYFYEIVTQDVLEVTILEIQKDVCDIPLAIVDLRSRGESINEKMKKYAKLGLPKSG
LSYEKKGPEVKGGSGPPSPGLGPQKPGNKAVQEQASSYAEPEPEQLPDRGEKELHALDAK
PSKFYDLGPDCVFEASENSCKDHMASEVLEGGLEGPPGDPGTFEEKYLMAGFGTASSLAS
EVKELLEASSLELPLSPDEESREFLELEPMELQCSLVGDEDKEDLDPGPPPGSLSPGRGP
GGALEPFAAQLSLEGEAEQQPELELPLSQPFPEAGLDALPARAAQQPQDSRCAGDRSRSS
CAAPADDQHAGASGGAPLPTDESPFGEDFPTYRGRNAAGLPPAPLVPTEEPREGRKQVHM
AADHISGSLIPLNLAVQLQNTYTLKGFSVGSKCVVWSSLRNTWSKCEILEIAEEGTRVLN
LSSGVEEVVSPENVWNGIPQLDKGPSEAGFQTMGKDHYFMSPDNVTMTEKECGDDLD
NT seq
6474 nt
NT seq
+upstream
nt +downstream
nt
atgagctggacgccggggctcccgccgccgggggcgtcgctgaccctgcgggtgaccttc
gtggacgtgcaccccgacgtgatccccgtgcagctgtggggcctggtgggccagcggcgg
gaggagtacgtgcggctgagccgggagatccaggaggcggcggcgacgcgcgggccctgg
gcgctgggcggcgccccggcggcgccgggcgagctgtgcctggtgcaggtggggctcgtg
tggcaccgctgccgcgtggtgagccgccaggcgcaggagagccgcgtcttcctgctggac
gagggccgcaccatggcggcgggcgcgggctcgctggcgccgggccgcagcgagttcttc
cacctgccgtcggaggtgctgggctgcgtgctggcgggcctggcgcccgcgggcggcggg
ggcgcgggcgggggcgagccgcagacgtgggcgcccggcgccgtggacttcctgagcggc
ctgcagggccaggagctgcggggccgcgtcctggacgtgctgctcccctaccgcctggtg
ctgctggaggtgcccgccgtcttccagcagatgcaggagctgggcctggcccgccaggtg
cccgacggcctcttctgcttcctgctgaagcgctacctggcgtcggtgggcaaggccgcg
tcggggaccccggtcctcccgcgggtgctgcccaagcccgagccgccgggcctggattac
ttctacccgcagctgcagctgggcgtgacggagcccgtggtggtgacgcaggtgtgccac
ccgcaccgcatccactgccagctgcggagcctgtcgcaggagatccgccgcctgtcggag
agcatggcgcaggcgtaccgcgcgtccccgcccgccgcgcggggcacgggggacgagagc
gcgggggcggcggcggggccggcggggggcgggcccggcggcggcggcggcgaggagcgg
gaggagagccccgacaagccgggctccccgtgcgcctcgtgcgggctggacggccgctgg
taccgcgcgctgctgctggagacgttccggccgcagcgctgcgcgcaggtgctgcacgtg
gactacgggcgcaaggagctggtgagctgcagcagcctgcgctacctgctgcccgagtac
ttccgcatgcccgtggtcacctacccgtgcgccctgtacgggctctgggactgcggccgc
ggctggtcgcgctcgcaggtgggcgacctcaaggcgctgatcctgggccaggcggtgaac
gccaagatcgagttctactgctcgctggagcacgcgtactacgtgacgctgtacggggag
gacggcctgaacctcaactgcgccttcggggtgcaggcctgctgcctggcggaccgcttc
ctgcgcagcagccgcggcggcggctcggacggggaggaggacgaggaggacgaggaggag
gaggaggcggcggcggcggcggcggcgggcgcggcgctgctgctgccgccgtcgccgccc
ccggcggaggaggagcgggacgcgttccccccgcgcgccctgcggagcatccggctccgg
atgaacgccttctacgacgcgcaggtggagttcgtgcagagcccgtcggagttctggatc
cgcctgcgcaagcacggccgcgccttccacaggctggcccgcaagatgggcagcttctac
gcgtcggccagcaagctggacggcgtggtgctgaggcccgagcccgacgacctgtgctgc
gtcaagtggaaggagaacggctacttccgggccacggtgacgcggctggacggccagagc
gtggacgtgttcctggtggaccggggaaactcggagacggtggactggtacgacgtgagg
atgctgctcccgcagttccggcagctgcccgtcctggcgctgaggtgcgccctggcggac
atctggcccctggggaagagctggagccaggaggccatctccttctttaagaagacggtc
ctccacaaggaactggtcatccacatcctggacaggcaggaccaccagtacatcatcgag
attctggacgaatcgcgcaccggagaggaaaacattagcaaggtgatcgcccaggccggc
tacgccaagtaccaggagttcgagacccaggggaacgggccctccccggggcagggggcc
ggcgctttcctcgcggagagtcacaaggcggcgtgttctgcccagaaggtcggggaacag
agagccaagatggaaaacaaaacctcctctgcgctagaaactcccagcgacccagcaatg
gctgcccacgttctggctgggcaagtggtgctggagaaggagaaggggatccctctgggt
tcccctccggtccccagcttcttgtccatgaaagccgccgacctttgctggaaaaacgaa
ctggaggtgggaaccaccgtggaagtgaaggtgtcctgcgtggagaaccccagctccttc
tggtgtcagttgtcgaaggacacgcaggggtttagaactctgatgtgtgacattgcagat
tattgtgaaaacaccccggccccttaccagggaatcacccctgcttgcctggcgaagagg
gccgagagcgggaagtggtcccgagccctgatctgcggggccccgtcctcggaactcgtc
agcgtggtcttcatcgattatggggacaaagacactgtgcctgtgaggaatatatacgcc
atgaccaacgactttctcaccgttagagctcaggctttcaggtgcagcctttataatcta
atccagcccactggggagaatcccttcgtgtgggatgagaaggccgtgcaggcgttcagc
ggatttgtcaacaacgcctggcaaaacaacctcgagttaaaatgcaccatctttgctctg
gcgtccgtccaggatgcggagccctttaacgtcgtggacctgctgactccctttcagagt
gcgtgccatttcttggtggagaagagactcgccaggcccgtaaagctccagaagcctctg
gaagcgtctgtgcggctccactcctactactattccacacacgacatgaaaatcgggagt
gaagaggccgtgtacataacccacgtcgatgacccctggacattctacttccagctggca
agaaactcgagtgtgttggagcagctgtcgtacagcatcacgcagttaagtgacgttttg
ctgaagctggacacgtctccctcggtccccgggaacttgtgccttgcccagtacacagac
agcaactggtaccgaggggtaataatggaaaaggatccgaataaagtcttctttgtggac
ttcgggaacatttatgtcaccaacgagaacctcctgcccataccccgggatgcgtacgac
gttttgctcctgcccatgcaagccgtcaagtgctccttgtcggatatccccagtcacatt
ccggaagaggtgacgacatggtttcaagagaccgtgttagacaagtccctgaaggcctta
gtggtggcgaaagatccggatggaaggctgattatagaactctacgatgacagcatccaa
atcaacgccagcattaatgagaaggtagggttgctgggttgtaaaaacaggatcaagaaa
aaacagaaagagggcgaagcgttcttcacctctgaaaccccggaagaaaaacatgacacg
gtgaagctgtctcctacagcgtacctgagtaagtcaggagagagccgattacacggtggg
gagatcctcggcgacgcttgcaaacccaagatgagctccctgtgtaaggagttcaggggt
ttacagagcccagcgaagaccagtctgttccctcaatatcaggaccctgtggaaaacacc
aacgagccagggtttcccttagcacgagtcaagaaagacatttttgaggacgcccccctg
cagaccctgagggtggagggcaccctcccggagaggcgggccggggccccggggaacaaa
gacttgcctcgaaaactcggcgagctccccaagaagatgatctcgcccggcttgaagacg
accgtgtacgtgtcccacgtgaacaacatctccgacttctacgtccagctcatggaggac
gaggcggaaatcaaccagctttctgagaggctgaacaatgcccagaccctcccgcagcac
tacacggggccgcctctgcaaagcgggaacgtcatctgcgccctgttccccgaagacaac
ctgtggtaccgggccgtggtccgggagcgccagcccaacgacttcctctcggtgcagttc
atagactacggcaacgtgtccgtggttcacgccaccaagaccggcaggctggagccggcg
aacgccctgttgccgggcctgtgcgtccactgctctctgcgaggactctgcgtccccgac
atcatcgactgtaaggaaatcaccacttacttttcccaaaggaccgacgaagcccagatg
gaatgtgaatttatcaaatttcaggaccggtgggaggtgattcttactgacgaccgaggc
atgatcgcagaagatgtggtgaacagatacgcttccatcgaaaaaccccgggcgggcctt
gccaccccgattgtgaaaggggatcgctcaaagtctgccaaccgaccggacgtggacacc
tccgtgttcctgaactggtacaacccgcagatgaaggcgctccgagcgtatgccaccgtc
atcgacgggcccgagtacttctggtgtcagtttgcaaacacggaggaactccagtactta
gagacggaggttcagaacgccggcaagcagatcctggagtggaggaaccgcatccactcg
cctcagatcggagacccgtgcatagtcaaatacagggaagacgggcactactaccgcgcc
ctgatcaccagcatctgtgaggacgacttcctgactgtcaggcttgtggactttgggaac
atggaggactgcgtggaccccaaagcggtctggaacatccccggggagctgctgatggtt
cccatgcaggcgttcccgtgctgcctggcgggatttcacgtctcgggaggcgcgtgcccc
caagacggcaatgactacttctacgaaatcgtcacacaggacgtgctggaggtgaccatc
ctggagatccagaaggacgtgtgcgacatccccctggccatcgtcgacctgagaagcaga
ggcgagagtatcaatgagaagatgaagaagtacgccaagctgggccttcccaagagcggc
ctgtcctacgagaagaagggccccgaggtcaaaggaggctccgggccccccagcccgggg
cttgggcctcagaagccaggcaacaaagctgtccaagagcaggcgtcgtcgtacgcggag
ccggagccggagcaactccccgacaggggcgagaaagagctgcacgcgctcgacgccaaa
ccgagcaagttctacgacctgggaccggattgcgttttcgaggcctcggagaactcgtgc
aaagatcacatggcgtcggaggtgctggaagggggcctggagggccccccgggggacccg
ggcacgttcgaggagaagtacctgatggcaggcttcggcaccgcctcgtccctggccagc
gaggtgaaggagctcctggaagcgagctcgctggagctgccgctctccccggatgaggag
tccagagaattcttagaactggaacccatggaactgcagtgttccctggtgggggatgaa
gacaaagaggacctcgacccggggccgcccccggggtccctgtccccaggccgcggcccc
ggaggtgccctggagcccttcgcggcccagctctccctcgagggcgaagccgagcagcag
ccagagctagaactgcccctgtcccagccgtttccggaggcgggcctagacgccctgccg
gccagagcggctcagcagcctcaggattccagatgtgccggtgaccggagcagatccagc
tgtgcggcgccggctgacgatcagcacgcgggggcctcgggcggggcccccctgcccacc
gacgagagcccgttcggggaagacttccccacgtaccgaggcaggaacgccgccgggctg
ccgccggcccccctggtccccacggaggaaccccgggaaggaaggaagcaagtccacatg
gcagcggatcacatctcaggtagtcttattccattgaatttggcagttcagctgcagaac
acctacaccttgaaaggattttcagttggatccaaatgtgttgtgtggtcaagtctgaga
aacacatggtccaaatgtgagattttggaaatagccgaagaaggcactagggttctgaac
ctttccagcggcgtagaggaggtcgtaagccctgagaacgtctggaatggcatcccccaa
ttagacaagggcccgtctgaggctggcttccaaacaatggggaaagatcattacttcatg
tcaccggataatgtcacaatgacagaaaaggagtgcggcgatgacctcgattag
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