Perognathus longimembris pacificus (Pacific pocket mouse): 125352525
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Entry
125352525 CDS
T08928
Symbol
Ptprd
Name
(RefSeq) receptor-type tyrosine-protein phosphatase delta isoform X1
KO
K06777
receptor-type tyrosine-protein phosphatase delta [EC:
3.1.3.48
]
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
125352525 (Ptprd)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
plop01009
]
125352525 (Ptprd)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
plop04515
]
125352525 (Ptprd)
Enzymes [BR:
plop01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.48 protein-tyrosine-phosphatase
125352525 (Ptprd)
Protein phosphatases and associated proteins [BR:
plop01009
]
Protein tyrosine phosphatases (PTPs)
Class I PTPs (Classical)
Receptor PTPs
125352525 (Ptprd)
Cell adhesion molecules [BR:
plop04515
]
Immunoglobulin superfamily
Type II RPTP family
125352525 (Ptprd)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Y_phosphatase
fn3
I-set
Ig_3
Ig_DSCAM-DSCAML_C
Pur_ac_phosph_N
Ig_2
ig
fn3_2
PTP-SAK
Tc-R-P
DSPc
V-set
PTPlike_phytase
Interfer-bind
Y_phosphatase3
PTP-NADK
Ig_VEGFR-1-like_5th
Ig_5
DUF5849
Kre9_KNH
Fn3_PTPRU
Glyco_hydro_46
Motif
Other DBs
NCBI-GeneID:
125352525
NCBI-ProteinID:
XP_048203670
LinkDB
All DBs
Position
1:complement(110683443..111165689)
Genome browser
AA seq
1928 aa
AA seq
DB search
MLPVQAADKLSCRMVHVARPLFLLLAFFLRVDAETPPRFTRTPVDQTGVSGGVASFICQA
TGDPRPKIVWNKKGKKVSNQRFEVVIEFDDGSGSVLRIQPLRTPRDEAIYECVASNNVGE
ISVSTRLTVLREDQIPRGFPTIDMGPQLKVVERTRTATMLCAASGNPDPEITWFKDFLPV
DTSNNNGRIKQLRSGALQIEQSEESDQGKYECVATNSAGTRYSAPANLYVRVRRVPPRFS
IPPTNHEIMPGGSVNITCVAVGSPMPYVKWMLGAEDLTPEDDMPIGRNVLELNDVRQSAN
YTCVAMSTLGVIEAIAQITVKALPKPPGTPVVTESTATSITLTWDSGNPEPVSYYIIQHK
PKNSEEPYKEIDGVATTRYSVAGLSPYSDYEFRVVAVNNIGRGPPSEPVLTQTSEQAPSS
APRDVQARMLSSTTILVQWKEPEEPNGQIQGYRVYYTMDPTQHVNNWMKHNVADSQITTI
GNLVPQKTYSVKVLAFTSIGDGPLSSDIQVITQTGVPGQPLNFKAEPESETSILLSWTPP
RSDTIASYELVYKDGELGEEQRVTIEPGISYRLQGLKPNSLYYFRLAARSPQGLGASTTE
ISARTMQSKPSAPPQDISCTSPSSTSILVSWQPPPAEKQNGIITEYSLKYAAVDGEDDKP
HEVLGIPSDTTKYLLEQLEKWTEYRITVTAHTDVGPGPESLSILIRTDEDVPSGPPRKVE
VEAVNSTSVKVSWRSPVPNKQHGQIRGYQVHYVRMENGEPKGQPMLKDVMLADAQWEFDD
TTEHDMIISGLQPETSYSLTVTAYTTKGDGARSKPKLVSTTGAVPGKPRLVINHTQMNTA
LIQWHPPVDTFGPLQGYRLKFGRKDMEPLTTLEFSEKEDHFTATDIHKGASYVFRLSARN
KVGFGEEMVKEITVPEEIPTGFPQNLHSEGTTSTSVQLSWQPPVLAERNGIITKYTLLYR
DINIPLLPMEQLLVPADTSMTLTGLKSDTTYDVKVRAHTSKGPGPYSPSVQFRTLPVDQA
VFAKNFHVKAVMKTSVLLSWEIPENYNSAMPFKILYDDGKMVEEVDGRATQKLIVNLKPE
KSYSFVLTNRGNSAGGLQHRVTAKTAPDVLRTKPAFIGKTNLDGMITVQLPEVPANENIK
GYYIIIVPLKKSRGKFIKPWESPDEMELDELLKEISRKRRSIRYGREVELKPYIAAHFDV
LPTEFTLGDDKHYGGFTNKQLQSGQEYVFFVLAVMEHAESKMYATSPYSDPVVSMDLDPQ
PITDEEEGLIWVVGPVLAVVFIICIVIAILLYKRKRAESESRKSSIPNSKEVPSHHPTDP
VELRRLNFQTPGSDDSGYPGNLHSSSMASHPPIPILELADHIERLKANDNLKFSQEYESI
DPGQQFTWEHSNLEVNKPKNRYANVIAYDHSRVLLSAIEGIPGSDYVNANYIDGYRKQNA
YIATQGSLPETFGDFWRMIWEQRSATIVMMTKLEERSRVKCDQYWPSRGTETHGLVQVTL
LDTVELATYCVRTFALYKNGSSEKREVRQFQFTAWPDHGVPEHPTPFLAFLRRVKTCNPP
DAGPMVVHCSAGVGRTGCFIVIDAMLERIKHEKTVDIYGHVTLMRAQRNYMVQTEDQYIF
IHDALLEAVTCGNTEVPARNLYAYIQKLTQIETGENVTGMELEFKRLASSKAHTSRFISA
NLPCNKFKNRLVNIMPYESTRVCLQPIRGVEGSDYINASFIDGYRQQKAYIATQGPLAET
TEDFWRMLWEHNSTIVVMLTKLREMGREKCHQYWPAERSARYQYFVVDPMAEYNMPQYIL
REFKVTDARDGQSRTVRQFQFTDWPEQGVPKSGEGFIDFIGQVHKTKEQFGQDGPISVHC
SAGVGRTGVFITLSIVLERMRYEGVVDIFQTVKMLRTQRPAMVQTEDQYQFCYRAALEYL
GSFDHYAT
NT seq
5787 nt
NT seq
+upstream
nt +downstream
nt
atgctgccagtgcaggctgctgacaagctgagctgcaggatggtgcacgtcgccaggccg
ctgtttctgctccttgccttcttcctccgcgtggatgctgagacacctcctaggtttaca
cgaactcctgttgatcaaacgggggtctctggcggagtcgcttctttcatttgccaagct
acaggagacccacgacctaaaattgtctggaacaaaaagggaaagaaagtcagcaatcag
agatttgaggtagtaatagagtttgacgatggatctggatcagttctcagaatacagcct
ttgcggactcctcgggatgaggccatttatgaatgtgtggcctcaaacaatgtgggagag
ataagtgtgtccaccagactcacagttttacgtgaggaccagattcccaggggcttccct
accattgacatgggcccacagttaaaggtggtggagcgtacgcgcaccgccaccatgctt
tgtgcagctagtggtaatccagatccagagatcacttggtttaaagatttcttacccgtc
gacacaagcaacaacaacggtcgtattaagcagttacgatcaggagcccttcagatcgaa
cagagtgaagaatctgaccaaggaaaatatgagtgtgttgctacgaacagcgcaggcact
cgctactctgcccctgccaatttatatgtcagagttcgccgtgtcccaccaagattctct
atcccacccactaatcatgaaatcatgccaggtggaagtgttaatatcacctgtgtggca
gtggggtcaccaatgccttatgtgaagtggatgttgggggcagaagatttgacacctgaa
gatgatatgccaattgggagaaatgtcttagaactgaatgatgtaagacagtcagcaaat
tatacctgtgttgctatgtcaacactaggtgtcattgaagcaatagcacagataactgtc
aaagccttacccaaacctccaggaactccagtagtgactgaaagcactgctacaagcatc
acattaacatgggactctgggaaccctgagcctgtctcctactacatcattcagcataaa
cctaaaaattctgaggaaccttataaagaaatcgatggggtggcaaccacacgctacagt
gttgctggactaagtccctactcggattatgaattcagggttgtagccgtcaataacatt
gggcggggacctcccagtgaacctgtgctaacacaaacctcagagcaagcaccatccagt
gccccaagggatgtccaggcacggatgttgagctccaccaccatcttggtacaatggaag
gaacctgaagagccaaatggacagatccaaggatacagagtgtattataccatggatcct
actcaacatgtcaacaactggatgaaacataatgtagcagatagccaaatcactaccatt
ggcaatttagtgccccagaaaacctactcggtcaaagttttggcttttacctcaattgga
gatggtcctctctcaagtgacatacaagtcatcactcagacaggagtaccagggcagcca
ctaaacttcaaggcagaacctgagtctgaaacaagtattttgctctcttggacacctcca
cgttcggacaccatcgccagctatgaactagtctacaaagatggggagcttggagaggag
caacgagttactatcgagccagggatatcatacagactgcaggggctgaaaccaaacagc
ctgtactatttccgtctggctgcacgctctcctcaaggcctgggtgcttccacgactgaa
atatcagcaagaaccatgcaatcaaagccatcagctcctcctcaagacattagttgcacc
agcccaagttccactagtatcttggtaagttggcaacctccaccagccgaaaaacagaat
gggatcatcaccgaatactcgctcaagtacgccgctgtggacggggaagatgacaaacct
catgaggttttgggaatcccttcggacactaccaaataccttttggaacagctggaaaaa
tggactgaataccggatcactgtgactgcccacacggatgtcggccctggccctgagagc
ctgtccatattgattcgaaccgatgaagatgttcctagtggtcctcctcgcaaagtcgag
gtagaggctgtcaactcaacatctgttaaagtctcatggcgctcacctgtgcccaataaa
cagcatggtcaaataagaggataccaggtgcattatgtgaggatggaaaatggtgagccc
aagggccagcccatgctgaaggacgtcatgctggctgatgcacagtgggaatttgatgat
actactgaacatgacatgatcatttctggactacaacctgaaacttcatactctctcact
gtcacagcctatactaccaaaggagatggggctcgaagcaagcccaaactggtgtccacc
actggggcagttccaggaaaaccccggcttgtcattaaccacactcagatgaacactgcg
ctcattcagtggcacccccctgtggacacctttgggccccttcagggctaccgtctaaag
tttggccgcaaagacatggagccactcaccactcttgagttctccgaaaaggaagatcac
tttacagccacagacatccataagggagcgtcttatgtctttaggctctcagccagaaat
aaagtgggctttggggaggagatggtgaaagaaatcactgttccagaagaaataccaact
ggattccctcaaaatctccactcagaaggcaccacttcaacctccgtccagttatcttgg
cagccacctgtcctggcagagagaaatggcattatcaccaagtatactcttctgtatagg
gatatcaacatcccccttctcccaatggagcaacttcttgttccagctgacacttctatg
acactcactggcttaaaatccgataccacatatgatgtaaaagtacgtgctcacacgagc
aaagggcccgggccatatagtcccagtgtccagttcaggacactgcctgtggatcaagca
gtgtttgcaaaaaattttcatgtcaaagcagtaatgaagacttctgtgctgctgtcttgg
gagattccagagaattataattctgccatgcctttcaaaattctttatgatgatgggaaa
atggtagaagaagtggatggccgagccacacagaagttaattgtcaacctgaagcctgag
aagtcctattcctttgtgctaacaaatcgtggaaacagtgctggtggtctgcagcacagg
gtaactgccaagacggcaccagatgttctgcgtaccaagcctgcctttattgggaagacc
aacttggatggaatgattactgtgcaacttcctgaagttcctgcaaatgaaaacataaaa
ggttactacataataattgtgcctttgaagaaatctcgtgggaaatttatcaagccatgg
gagagtcctgatgaaatggaattagatgagctgcttaaggagatatctaggaaacgcagg
agcattcgttatgggagagaagttgaattaaagccatatattgcagctcactttgatgtt
ctgcccactgagttcaccctgggggatgacaagcattacggtggatttacaaacaagcaa
ctccaaagtggacaagaatatgtcttcttcgtgttagctgtgatggagcatgcagagtct
aagatgtatgcaaccagcccctactctgaccctgttgtgtcaatggatctggacccacaa
ccaatcacagatgaggaggaaggcttgatctgggtcgtagggcctgtccttgcagtggtc
tttatcatctgcattgtcattgctattcttctatacaaaaggaaaagggcagaatctgag
tctagaaaaagcagcatcccgaacagtaaggaggtcccttctcaccacccaacagaccca
gtagaactgagacgccttaactttcaaacaccaggttcagatgattccggttaccctggt
aaccttcattcttcaagtatggctagccatcctccaatccctatcttggaacttgcagat
cacattgaaaggttgaaagcgaatgacaacttgaagttttcccaagaatatgagtcaatt
gaccctgggcagcagttcacatgggaacattcaaacttggaagtaaataaaccaaagaac
agatatgcaaatgtaattgcatatgatcattcccgggttctcttatcagcaatagaaggc
atcccaggaagtgactatgtgaatgccaactacatagatggctacaggaaacaaaatgct
tatattgcaacacagggatctcttcctgaaacatttggggacttttggagaatgatatgg
gagcaacggagtgccacaattgtcatgatgacaaaattagaagaaagatccagggtgaag
tgtgaccagtattggcccagcagaggcacagagacccacggactagtccaagtgacactg
ctggatacggtggaactggccacatactgtgttcgaacatttgcactttacaagaatggc
tcaagtgagaagcgagaagtaagacaattccagttcactgcgtggcccgatcatggtgtt
ccagagcaccccacgcctttcttagctttcttacggagagtcaaaacctgtaaccctcct
gatgcaggacccatggttgtgcactgcagtgcgggagttggccggactggttgtttcatc
gtaatagatgccatgctagaaagaataaagcatgaaaaaactgtagatatttatggccat
gtaaccttaatgagagcccagaggaactacatggttcaaacagaagaccagtacatcttt
atccatgatgcactgttagaagcagtgacttgtggaaataccgaagtgccagctagaaac
ttgtatgcctacattcagaagctgacacaaatagaaacaggggagaatgtcacaggaatg
gagcttgaatttaagcgtctagccagctcaaaagctcacacctcaagattcatcagtgcc
aatcttccatgtaataaattcaaaaatcgccttgttaatattatgccatatgaatccaca
agggtatgcctacagcctatccgaggggtagaaggctctgactacatcaatgccagtttc
attgatggatacagacaacagaaggcctacattgctacccaagggcccttggcagaaacc
actgaagatttctggcggatgctctgggaacacaactccaccattgtcgtgatgctaacc
aagctgcgtgaaatgggcagggagaaatgtcaccaatattggccagctgagcgttctgca
agatatcagtattttgttgtagatcctatggctgaatacaacatgccacagtatatccta
agggaattcaaggtcacagacgccagggacggccagtcccgaacagtgaggcagttccag
ttcactgactggccagaacaaggagtgccaaagtctggagaaggatttattgacttcatc
ggccaagttcataaaacaaaggagcagtttggccaagatggacccatttcagtccactgc
agtgcgggagttggaagaacgggcgtcttcataacactgagcattgttttggaaagaatg
agatacgaaggagttgtagacatcttccagactgtcaaaatgttaagaacacaaagaccg
gccatggtgcagacagaggatcagtaccagttctgctatcgagccgcactcgaatacctg
ggcagctttgatcactatgcaacatag
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integrated database retrieval system
