Perognathus longimembris pacificus (Pacific pocket mouse): 125352529
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Entry
125352529 CDS
T08928
Symbol
Aars2
Name
(RefSeq) alanine--tRNA ligase, mitochondrial
KO
K01872
alanyl-tRNA synthetase [EC:
6.1.1.7
]
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
125352529 (Aars2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
plop01007
]
125352529 (Aars2)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
plop03016
]
125352529 (Aars2)
Enzymes [BR:
plop01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.7 alanine---tRNA ligase
125352529 (Aars2)
Amino acid related enzymes [BR:
plop01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
125352529 (Aars2)
Transfer RNA biogenesis [BR:
plop03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
125352529 (Aars2)
Prokaryotic type
125352529 (Aars2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2c
tRNA_SAD
DHHA1
NGO1945_C
Motif
Other DBs
NCBI-GeneID:
125352529
NCBI-ProteinID:
XP_048203637
LinkDB
All DBs
Position
6:6282348..6295480
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AA seq
986 aa
AA seq
DB search
MAASVAAVAGRLRRAIRRSSSWQGPSPRPRSAEPPPAPGSSVRDTFLSFFRDRHGHRLVP
SASVRPRGDPSLLFVNAGMNQFKPIFLGTVDPRSEMAGFRRVANSQKCVRAGGRHNDLED
VGRDLSHHTFFEMLGNWAFGGEYFKEEACSMAWELLTEVYGIPKDRLWVSYFGGDPKAGL
DPDLESRDIWLSLGVPSSHVLSFGSQENFWEMGDTGPCGPCTEIHYDLAGGVGAPQLVEL
WNLVFMQHNREANGSLQPLPQRHVDTGMGLERLVAVLQGKRSTYDTDLFSPLLSAIHQGC
GAPPYSGRVGEADEGRLDTAYRVVADHMRTLSVCMADGISPGMSGAPLVLRRILRRAVRF
SMEVLRAPPSFLGSLVPVVVETLGAAYPELQKNSAQIASLVSEEEAAFLASLQRGRRVID
RTLKQLGPAELFPAEVAWSLSLSGNLGLPLDLVELMLEEKGVRLDSTGLERLAQEEAQHR
AQQAEPAQEQRLHLDIHALGELQRQGVPPTDDSPKYSYGLQPGGGYEFGPCEAQVVRLYT
ESGAAVASVGAGQRCGLLVDRTNFYAQQGGQASDRGYLVRAGQPDVLFPISRAHVCGGFV
LHEAVAPERLQVGDRVQLHVDEAWRRGCMEKHTATHLLNWALRETLGPGAEQRGSHLNPE
RLRFDVATQTPLTAEQLRRVEGAVREAAGRDEAVYAEEVPLARAARIPGLRTLDEVYPDP
VRVVSVGVPVAQALEPDSQAALRTSMELCCGTHLLRTGAVRDLVIVGEHQLSKGTTRLLA
VTGEQAQQAREVGQALAQEVEAASERLSRGTQDLTEAQRLSKDIGRLTEAVDTAGMPQWQ
RRELQAALKALQRRANTAVRKLELGQAAEKSRELLRRHEKGPVIVDAVSAESLSVLVKVV
RQLCEQAPSTSVLLLSPQGGGRVLCACQVAQGAKPALTAQAWALAVCSHMGGKSWGSRVV
AQGTGSTADLEAALRAARAYALGQIH
NT seq
2961 nt
NT seq
+upstream
nt +downstream
nt
atggcggcatccgtggcggctgtggccgggcgtctgcggcgggccattcgaaggtcgtcc
tcgtggcagggccccagccctcggccgcgctcagccgaaccccctccagccccaggatcg
tccgtgcgcgacaccttcctgagcttctttcgggaccgccatggccatcggctggtgcct
tctgcttccgtgcggccccggggcgaccccagtctgctgttcgtcaacgccggcatgaac
cagttcaagcccatcttcctgggcactgtggatcctcgcagtgaaatggcaggcttccga
cgtgtggccaacagccagaagtgtgtgcgggctggaggacgccacaatgacctggaagat
gtgggccgggacctctcccatcataccttctttgagatgctcggcaactgggcttttggg
ggtgaatattttaaggaggaagcttgcagcatggcctgggaactgctgactgaggtctac
ggaatccctaaggatagactctgggtctcctactttggtggtgaccccaaagccgggctg
gacccagacctggagagcagggacatctggctcagcttgggtgtgccttccagccatgtg
ctttcctttggatcgcaagagaacttctgggagatgggcgacactggcccttgtggaccc
tgtacagagatccactatgacctggctggaggcgtcggggccccacagctggtggagctt
tggaatctggtcttcatgcagcacaacagagaggcgaatggaagcctgcagcccctgccc
cagcggcacgtggacacgggaatgggcctggagaggctggtggctgtgctgcaaggcaag
cgctccacctacgacaccgacctcttctccccgctgctcagcgccatccaccagggctgc
ggggcgcccccttactcaggccgcgtcggggaggcagacgaggggcgcctggacacggcg
taccgcgtggtggctgaccacatgcgcacgctgagcgtctgcatggcggacggcatctct
ccggggatgtcgggagccccgctggttcttcgccggattctccgccgagccgtgcggttc
tccatggaggtcctgcgggcaccacccagcttcttgggcagcctggtgcctgtggtggtg
gagacactgggtgctgcttacccagagctgcagaagaattcagcccagatagccagcctg
gtgtcggaggaagaggcggccttcctggcctccctgcagcgcggccgcagggtcatcgac
cgcaccctgaagcagctggggcctgcagagttgttccctgccgaagtggcctggtccttg
tcactatctggaaacctggggctccccctggacctggtagagctgatgctggaggagaag
ggggtgcggctggactccactggactggagaggctggcccaggaggaggcgcagcaccgg
gcccagcaggctgagccagctcaggagcagaggctgcaccttgacatccatgcactgggg
gagctacagcgtcagggggtgccccccacagatgacagccccaagtacagctacgggctg
cagcccggtggaggttacgagttcggcccctgtgaggcccaggttgtccggctgtacacc
gagagcggggcggcggtggcctctgtgggggccggccagcgctgcggcctcctcgtggac
aggaccaacttctacgcccaacaggggggtcaggcttccgaccggggctacctggtccgg
gcggggcagccggacgtgttatttcccatatcccgggcccacgtctgcgggggcttcgtc
ctgcacgaggcggtggcccccgagcgcctgcaagtcggggaccgggtgcagctgcacgtg
gacgaggcctggcgacgggggtgcatggagaagcacacggccacgcacctgctgaactgg
gcgctgcgggagacgctgggccccggcgcggagcagcggggctcccacctcaaccccgag
cggctgcgcttcgacgtggccacccagacacccctgactgcggagcagctgcggagggtg
gagggcgccgtgcgggaggccgcgggccgggacgaggccgtgtacgccgaggaggtgccc
ctggcgcgcgccgcccgcatcccgggtctgcgcaccctggacgaggtgtacccggacccc
gtgcgggtggtgtcggtgggggtacccgtggcccaggccctggagccagactcccaggct
gcactgcgcacctcgatggagctctgctgcggcacgcacctgctgcgtacaggggcagtg
agggacctggtcatcgtcggggagcaccagctctccaaggggaccacccgccttctggcc
gtcacgggggaacaggcccagcaggcccgggaggtgggccaggctttggcccaggaggtg
gaagcagcctcggagaggctgagtcggggcacccaggacctgaccgaggctcagcgactg
tccaaggacatcggacgactcacagaagccgtggacaccgcggggatgccccagtggcag
cggcgggagctgcaggccgcgctgaaggctctgcagcgccgcgccaacaccgccgtccgg
aagctggagctgggccaggctgcggagaagtcccgggagctgctgcggcggcacgagaag
gggcctgtgatcgtggacgccgtctctgcggagtccctctcggtgctggtgaaggtggtc
cggcagctgtgtgagcaggcccccagcacgtccgtgctcctgctcagcccccagggcgga
ggcagggtgctgtgtgcctgccaggtggcccagggtgccaagcctgccctcacagcacag
gcctgggccctggccgtgtgcagccacatgggggggaagtcctggggctcccgcgtggtg
gcgcagggcaccgggagcacggccgacctggaagctgccctccgcgcggcccgcgcctac
gccctgggccagatccactga
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