KEGG   Perognathus longimembris pacificus (Pacific pocket mouse): 125352530
Entry
125352530         CDS       T08928                                 
Symbol
Cdc5l
Name
(RefSeq) cell division cycle 5-like protein
  KO
K12860  pre-mRNA-splicing factor CDC5/CEF1
Organism
plop  Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:plop00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    125352530 (Cdc5l)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:plop03041]
    125352530 (Cdc5l)
   03400 DNA repair and recombination proteins [BR:plop03400]
    125352530 (Cdc5l)
Spliceosome [BR:plop03041]
 Complex B
  Other components
   Prp19 complex
    125352530 (Cdc5l)
 Complex C
   Prp19-CDC5 complex
    125352530 (Cdc5l)
DNA repair and recombination proteins [BR:plop03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   PSO4 complex
    125352530 (Cdc5l)
SSDB
Motif
Pfam: Myb_Cef Myb_DNA-binding Myb_DNA-bind_6 TPR_HPS5_insect Rap1_C C45G9_C
Other DBs
NCBI-GeneID: 125352530
NCBI-ProteinID: XP_048203638
LinkDB
Position
6:complement(6221980..>6257079)
AA seq 797 aa
SKGGVWRNTEDEILKAAVMKYGKNQWSRIASLLHRKSAKQCKARWYEWLDPSIKKTEWSR
EEEEKLLHLAKLMPTQWRTIAPIIGRTAAQCLEHYEFLLDKTAQRDNEEETTDDPRKLKP
GEIDPNPETKPARPDPIDMDEDELEMLSEARARLANTQGKKAKRKAREKQLEEARRLAAL
QKRRELRAAGIEIQKKRKKKRGVDYNAEIPFEKKPALGFYDTSEENYQALDADFRKLRQQ
DLDGELRSEKEGRDRKKDKQHLKRKKESDLPSAILQTSGVSEFTKKRSKLVLPAPQISDA
ELQEVVKVGQASEIARQTAEESGITNSASSTLLSEYNVTNNSIALRTPRTPASQDRILQE
AQNLMALTNVDTPLKGGLNTPLHESDFSGVTPQRQVVQTPNTVLSTPFRTPSNGAEGLTP
RSGTTPKPVTNSTPGRTPLRDKLNINPEDGMADYSDPSYVKQMERESREHLRLGLMGLPA
PKNDFEIVLPENAEKELEEREADDAYIEDAADADARKQAIREAERVKEMKRMHKAVQKDL
PRPSEVNETILRPLNVEPPLTDLQKSEELIKKEMITMLHYDLLHHPYEPSGNKKGKTAGF
GTNNAEHITYLEHSPYEKFSKEELKKAQEVLIQEMEVVKQGMSHGELSSEAYNQVWEECY
SQVLYLPGQSRYTRANLASKKDRIESLEKRLEINRGHMTTEAKRAAKMEKKMKILLGGYQ
SRAMGLMKQLNDLWDQIEQAHLELRTFEELKKHEDSAIPRRLECLKEDVQRQQEREKELQ
QRYADLLLEKETLQSKF
NT seq 2394 nt   +upstreamnt  +downstreamnt
tcaaaggggggcgtgtggcggaataccgaggatgaaattctgaaagcagcggtaatgaaa
tatgggaaaaaccagtggtctaggattgcctcactgctgcatagaaaatcagcaaagcag
tgcaaagccagatggtatgagtggctagatccaagcattaaaaaaacagaatggtccaga
gaagaagaggagaagcttttgcacttggccaagttgatgccaacgcagtggaggaccatc
gcgcccatcattggaaggacagcagcccagtgtttggagcactacgagtttctcctggac
aaaactgcccagagagacaatgaagaggaaaccacagacgatccacgaaagcttaaacct
ggagaaatagatccaaatccagagacaaaaccagctcggcctgatccaatcgatatggat
gaggatgaacttgaaatgctttctgaagctagagctcgcttggctaatactcagggaaag
aaggccaagagaaaagcaagagagaaacagctggaagaagcaagacgtcttgctgccctt
caaaaaagaagagaacttcgagcagctggtatagaaattcagaagaaaagaaaaaagaag
agaggtgttgattataatgctgagattccatttgaaaaaaagcctgctcttggtttttat
gatacttcagaggaaaactaccaggctcttgatgcagatttcaggaaactaagacaacag
gatctcgatggggagctaagatctgaaaaagaaggaagagataggaaaaaagacaaacag
cacttgaaaagaaaaaaggaatctgatttaccatcagcaattcttcagactagtggtgtt
tctgagtttactaaaaagagaagcaaactggtacttcctgcccctcagatttcagatgcg
gagctccaggaagttgtaaaagtaggccaagcaagtgagatcgcacgtcagactgctgag
gagtctggcataacaaactctgcatccagcactctcttgtctgagtacaatgtcaccaac
aacagcattgctcttaggaccccacgaacaccagcatcgcaggacagaattctgcaggag
gcccagaacctcatggccctgaccaatgtggacaccccattaaaaggtggactgaatacc
ccattgcacgagagtgacttctctggtgtgactccacagcggcaagtggtgcagactccc
aacacagttctttctaccccattcaggacgccttctaacggagctgaggggctgactccc
cggagtggaaccacccccaagcctgtgacgaactccacccctggtagaactccgcttaga
gataagttaaacattaacccagaggatggaatggcggactacagtgatccctcttacgtg
aagcagatggaaagagaatctcgtgagcatctccgcttaggattgatgggccttcctgcc
cctaagaatgattttgaaattgttctaccagaaaatgcggagaaggagctggaggagcgt
gaggcagatgacgcgtacatcgaggatgccgcagatgcggacgcgcggaagcaggccatt
cgagaagctgagcgggtgaaagaaatgaagcgaatgcacaaagctgttcagaaagatttg
ccaagaccatctgaagtaaatgaaactattctaaggcccttaaatgtagaaccacctctg
acagatttgcagaaaagtgaagaactaatcaaaaaggaaatgattacaatgcttcattat
gatcttctgcaccatccctacgaaccctctggaaataagaaaggaaaaactgcaggattt
ggtacaaacaatgcagaacacattacttatttagagcatagcccttatgagaagttctcc
aaagaagagctgaagaaggcccaggaagttctgatacaagagatggaagtggtcaaacaa
ggaatgagccacggtgagctctccagtgaagcttacaaccaggtgtgggaagagtgctac
agtcaagttttgtatcttcccgggcagagccgctacacacgggctaatctagccagcaaa
aaggatagaattgaatcacttgaaaaaaggcttgagataaacagaggtcacatgacgact
gaagccaagagagctgcaaagatggaaaagaagatgaagattttgcttggaggttaccag
tctcgggccatgggcctcatgaaacagttgaatgacttatgggaccaaattgagcaggct
cacttggagttacgcacttttgaagaactcaagaaacacgaagattctgcaattccacgg
agactggagtgtcttaaagaagatgtgcagcggcagcaggagagagaaaaggagcttcag
cagaggtacgcagacctgctgctggagaaggagacattgcagtccaagttctga

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