Perognathus longimembris pacificus (Pacific pocket mouse): 125352572
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Entry
125352572 CDS
T08928
Symbol
Pex6
Name
(RefSeq) peroxisome biogenesis factor 6 isoform X1
KO
K13339
peroxin-6 [EC:3.6.4.-]
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
125352572 (Pex6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
plop04131
]
125352572 (Pex6)
Membrane trafficking [BR:
plop04131
]
Autophagy
Pexophagy
Other pexophagy associated proteins
125352572 (Pex6)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
DPBB_PEX6
PEX6_vert_N
AAA_lid_3
AAA_16
AAA_33
AAA_22
TIP49
nSTAND3
NPHP3_N
TsaE
AAA_5
RuvB_N
AAA_25
Mg_chelatase
RNA_helicase
AAA_11
Vps4_C
IstB_IS21
AAA_28
PEX6_4th
AAA_14
Parvo_NS1
Motif
Other DBs
NCBI-GeneID:
125352572
NCBI-ProteinID:
XP_048203703
LinkDB
All DBs
Position
6:7218329..7228466
Genome browser
AA seq
980 aa
AA seq
DB search
MALAVLRVLDPFPTETPPLSVLLPPGGPWPAAGLGLVLALRPADESPAGPALLVAAQEGP
GAGPGEQGPGPPQLLVSRALLRLLALGSGARVRARPVRRPPALGWALLGACPGPGLGPRV
GPLLVRRGETLPVPGPRILETRPALQGLLGPGTRLAVTELRGRARLGLESGDGSRPPPPP
IASSFAVSDTVRQLRGVLGGAGDSLGVSRSCLRSLGLFQGEWVWVARAGELPSNTSQPHL
AKVQVLEPRWDLCERLGPGSGQLAEPTADGLVHVPATLAFNLGCDPLEVGELRIQRYLEG
SVTPEDKGSCSLLPGPPFASELHIEIVSSPYYSISGNYDRVLYQHFQTPRVVQEGDVLCV
PTVGQVEILEGSPEKLPRWREIFFKVKKTVGEAAGGPTSTYLADTTHTSLYTGGSTLSPV
PALSLERSVWSGLSPPGLEALVTELCAVLQPRLQPGGALLAGASCVLLRGSPGSGKATAV
AAACSRLGLHLLKVPCSSLCADSSGATETKLQAAFARARRCRPAVLLLTALDLLGRDRDG
LGEDARVVATLRRLLLDEDPLSSCPPLMVVATTSRAQDLPADVQTAFPHELEVPVLSEGQ
RLRVLRALTARLPLGQEVNLAQLARRCAGFVVGDLRALVTHSSRAACTRIKNSGLAGDLS
EEEERDWCLAGFPLLAEDFGQALERLQTAHSQAVGAPKIPSVSWGDVGGLQEVKKEILET
IQLPLEHPELLSLGLRRSGLLLHGPPGTGKTLLAKAVATECSLTFLSVKGPELINMYVGQ
SEENVREVFSRARAAAPCIIFFDELDSLAPSRGRSGDSGGVMDRVVSQLLAELDGLHSTP
DVFVIGATNRPDLLDPALLRPGRFDKLVFVGANEDRASQLRVLSTITRKFKLEPSVSLAG
VLDCCPPHMTGADLYSLCSDAMMAALKRRVHDLEEGLEAGGSALLLTMEDLLQAAARLQP
SVSEQELLRYKRIQRKFAAC
NT seq
2943 nt
NT seq
+upstream
nt +downstream
nt
atggcgctggccgtcttgcgcgtcctggatcccttcccgaccgagacgccgccgttgtca
gtgctgctgcctcccgggggcccgtggcctgcggcggggctgggcttggtgctggccctg
cggccggcagacgagagccctgcgggcccggcgctgctggtggcggctcaggagggcccg
ggcgcggggcccggggagcaggggcccgggcccccgcagctcctcgtgagccgcgcgttg
ctgcggctcctggcgctgggctccggggcgcgggtgcgggcgcggcccgtgcggcggccc
ccggcgctcggctgggcgctgctgggcgcctgcccggggcccgggctcgggcctcgcgtc
gggccgctgctggtgcggcgtggggagaccctgccggtgcccgggccgcgcattttggag
acgcggccggcgctgcaagggctgctgggtcccgggacgcgactggccgtcaccgagctc
cgcggtagggccagattgggactggagagtggggacggcagccggcccccacccccgcct
atagcatcctcctttgctgtttccgacaccgtccggcaactccgaggagttctagggggg
gctggagattcactaggggtgagccggagctgcctccgtagtctcggcctcttccagggc
gaatgggtgtgggtggcccgggccggagagttaccgtcgaacacttcccagccgcatctg
gccaaggtgcaggtcctagagcctcgctgggacctctgtgagagactgggacctggctct
gggcagctggcagagccgaccgctgacggactggtacacgtgcctgccactctggctttt
aatctcggctgtgaccccttggaagtgggagagctcagaattcagaggtacttggaaggc
tccgtcacccccgaagacaaaggaagctgctcactgttgcccgggcctccatttgccagc
gagttacacattgaaattgtgtcctcgccctactacagcattagtgggaactatgaccgt
gttctttaccagcactttcagacacccagggtggtccaggaaggggatgttctatgtgtg
ccaactgttgggcaagtagagatcctggaaggaagtccggagaaactgcccaggtggcgg
gaaatattttttaaagtgaagaaaacagttggggaagccgcaggtgggccgaccagcacg
tacctggccgacaccacccatacctccttatacacggggggctctaccttgagccctgtt
ccagcgctgtctttagaacgatctgtctggagcggcttgtccccgccaggcctggaggcc
ttggtgactgagctgtgtgcggtgctgcagccgcgcctccagcctgggggggccttgctg
gcaggagctagctgcgtccttcttcgcgggtcccccggcagcgggaaggccacggcggtg
gctgctgcctgcagtcgccttgggctccacttactcaaggtgccctgctccagcctctgt
gccgacagcagtggggccaccgagacgaagctgcaggcggccttcgcccgcgcccgccgc
tgcaggcctgcggtcctcctgctcacggcgctggaccttctgggccgcgaccgcgacggg
ctgggcgaggacgcacgcgtcgtggccacgctgcgccgcctcctcctggatgaggacccg
ctcagcagctgccctccgctgatggtggtggccaccacgagccgggcgcaggacctgccc
gcggacgtgcagacggcgttcccgcacgagctggaggtgcccgtgctgtcggaggggcag
cggctccgcgtcctgcgggccctcaccgcccgcctccccctgggccaagaggtgaacctg
gcgcagctggcgcgccgctgtgcgggctttgtggtgggggatctccgcgccctcgtgacc
cacagcagccgggcagcctgcaccaggatcaagaactcgggtctggcaggcgacctgagc
gaggaggaggagcgggactggtgtctggctggcttccccctcctggccgaggacttcggg
caggcgctggagcgactgcagacggctcactcccaggccgtgggcgcgcccaagatcccc
tcggtctcctggggcgacgtgggcgggctgcaggaggtgaagaaggagattctggagacc
atccagctccctctggagcaccccgagctgctgagcctgggcctgaggcgctcaggcctc
ctgctccacgggccccccggcacgggcaagaccctgctggccaaggccgtggccaccgag
tgcagcctcaccttcctcagcgtgaaggggccggagctcatcaacatgtacgtgggccag
agcgaggagaacgtgcgagaagtgttttccagggccagggccgctgccccgtgcatcatt
ttctttgatgaactggactccttggcccccagccggggtcggagtggagactctggcggc
gtgatggacagggtggtatctcagctcctggccgagttggatgggcttcacagcactccg
gatgtgtttgtgatcggagccaccaacagacccgacctcctggaccctgcccttctgcgg
cctggcaggtttgacaagctggtgttcgtaggggccaatgaggaccgggcctcccagctg
cgcgtcttaagcaccatcacgcgcaaattcaagctggagccctcggtgagcctggcgggc
gtgctggattgctgccctccccacatgaccggcgcggacctctactcgctctgctcggat
gccatgatggctgccctcaagcgcagggtccacgacctggaggaaggactggaggccggg
ggctcggcgctgctgctcaccatggaggacttgctgcaggccgctgcccgcctgcagccc
tcggtgagcgagcaagagctgctgcgctacaagcgcatccagcgcaagttcgccgcctgc
tag
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integrated database retrieval system
