Perognathus longimembris pacificus (Pacific pocket mouse): 125352596
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Entry
125352596 CDS
T08928
Symbol
Usp49
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 49
KO
K11834
ubiquitin carboxyl-terminal hydrolase 44/49 [EC:
3.4.19.12
]
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
plop01002
]
125352596 (Usp49)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
plop04121
]
125352596 (Usp49)
Enzymes [BR:
plop01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
125352596 (Usp49)
Peptidases and inhibitors [BR:
plop01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
125352596 (Usp49)
Ubiquitin system [BR:
plop04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
125352596 (Usp49)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
zf-UBP
UCH_1
zf-UBP_var
Motif
Other DBs
NCBI-GeneID:
125352596
NCBI-ProteinID:
XP_048203734
LinkDB
All DBs
Position
6:7800510..7856038
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AA seq
683 aa
AA seq
DB search
MDRCKHAGRLRLAQDHSILNPQKWRCLACATTESVWACLKCAHVACGRYMEDHALRHFQD
TGHPLAMEVRDLYVFCYLCKDYVLNDNPEGDLKLLRSSLLAVRGQQDRAGRGRTLRSAAA
GEDAAPPPPSAPRGQPQMLTALWYRRQRLLAKTLRLWFARSSRGRAQLERRRQEEALERK
KEAARQRRREVKRRRLLEELTSAPPRKSARLLLLAPRPAAGPPAPAPAALAAARRAAPGP
LKPRRQPTVAPGVTGLRNLGNTCYMNSILQVLSHLQKFRECFLNLDPSTTEHLFPQAVNG
QAPLPGRPAGSATQLSARSDRVEGLGWHGGASLSRSLELIQNKEPSSKHISLCHELHTLF
RVMWSGKWALVSPFAMLHSVWSLIPAFRGYDQQDAQEFLCELLHKVQQELESEGSTRRIL
IPFSQRKLTKQVLKVVNTIFHGQLLSQVTCISCNYKSNTIEPFWDLSLEFPERYHCIEKG
FVPLNQTECLLTEMLAKFTETEALEGRIYACDQCNSKRRKSNPKPLVLSEARKQLMIYRL
PQVLRLHLKRFRWSGRNHREKIGVHVAFDQVLTMEPYCCRDMLSSLDKETFAYDLSAVVM
HHGKGFGSGHYTAYCYNTEGGFWVHCNDSKLNVCSVEEVCKTQAYILFYTQRTVQGNARL
SEPQLQAQVQSSNKDGGRPQTFP
NT seq
2052 nt
NT seq
+upstream
nt +downstream
nt
atggatagatgcaaacatgcggggcggttacggctcgcccaggaccactccatcctgaac
ccgcagaagtggcgctgcctggcgtgcgccaccaccgagtccgtgtgggcgtgcctcaag
tgcgcgcacgtggcgtgcggccgctacatggaggaccacgcgctccggcacttccaggac
accgggcacccgctggccatggaggtccgggacctctacgtgttctgctacctgtgcaag
gactacgtgctcaatgacaaccccgagggggacctgaagctgctccggagctcgctcctg
gccgtgcggggccagcaggaccgggccgggcgcgggcggacgctgcgctccgcggccgcg
ggcgaggacgcggccccgccgccgccgagcgcgccccgggggcagccgcagatgctcacg
gcgctgtggtaccggcgccagcgcctgctggccaagacgctgcggctgtggttcgcccgc
agctcgcggggccgggcgcagctggagcggcggcggcaggaggaggccctggagcgcaag
aaggaggcggcgcggcagcggcggcgggaggtgaagcggcggcggctgctggaggagctg
accagcgcgcccccgcgcaagagcgcgcgcctgctgctgctggcgccccgccccgccgcg
ggcccgccggcccccgcgcccgccgccctggccgccgcccgccgcgccgcccccggcccg
ctcaagccgcgccgccagcccaccgtggcgcccggcgtcaccggcctgcgcaacctgggc
aacacctgctacatgaactccatcctgcaggtgctcagccacctccagaagttccgggag
tgcttcctgaacctcgacccctccaccaccgagcacctcttcccccaggccgtcaacggc
caggccccgctcccgggccggcccgccggctccgccacccagctgtcggcccggagcgac
cgcgtcgagggcctcggctggcacgggggcgcctccctcagcaggagcctggagctcatc
cagaacaaggagcccagctccaaacacatttccctctgccacgaactgcacaccctcttc
cgagtcatgtggtccgggaagtgggccctggtgtcgccctttgccatgctccactccgtg
tggagcctcatccccgccttccggggctacgaccagcaggacgcgcaggaattcctctgc
gagttgcttcacaaagtacagcaggagctcgagtccgagggctccacgcgccggatcctc
atccccttctcccagaggaagctcaccaaacaggtcttaaaggtggtgaacaccatattt
catgggcagctgctcagtcaggttacatgtatatcatgcaattacaaatccaataccatt
gagcccttttgggatctgtccctggaattccctgaacgctatcactgtatagaaaaaggg
tttgtcccgctgaatcagacagagtgcctgctcactgagatgctggccaagttcacggag
acagaggcgctagaagggagaatctacgcttgtgaccagtgtaacagcaagcgacgaaaa
tccaaccccaaaccccttgttctgagtgaagctaggaagcagttaatgatctacagacta
cctcaggtcctccggctgcaccttaagagattcaggtggtctggccgtaatcatcgagag
aagattggggtccatgtcgcctttgaccaggtattaaccatggaaccttactgctgcagg
gacatgctctcctctcttgacaaagagacctttgcctatgatctctccgcggtggtcatg
catcacgggaaagggtttggctcaggacactacacagcctattgctacaacacagaggga
ggtttttgggttcactgcaatgactcaaagctgaatgtatgcagtgtggaggaagtgtgc
aaaacccaggcctacattcttttttacactcaaagaacagtgcagggaaatgcaagactc
tcagaaccccaactccaagctcaggtgcagtccagcaacaaggatggaggcagaccacag
acattcccctga
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