KEGG   Perognathus longimembris pacificus (Pacific pocket mouse): 125352650
Entry
125352650         CDS       T08928                                 
Name
(RefSeq) tubulin beta chain-like isoform X1
  KO
K07375  tubulin beta
Organism
plop  Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop04145  Phagosome
plop04540  Gap junction
plop04814  Motor proteins
plop05010  Alzheimer disease
plop05012  Parkinson disease
plop05014  Amyotrophic lateral sclerosis
plop05016  Huntington disease
plop05020  Prion disease
plop05022  Pathways of neurodegeneration - multiple diseases
plop05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:plop00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    125352650
  09144 Cellular community - eukaryotes
   04540 Gap junction
    125352650
  09142 Cell motility
   04814 Motor proteins
    125352650
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    125352650
  09164 Neurodegenerative disease
   05010 Alzheimer disease
    125352650
   05012 Parkinson disease
    125352650
   05014 Amyotrophic lateral sclerosis
    125352650
   05016 Huntington disease
    125352650
   05020 Prion disease
    125352650
   05022 Pathways of neurodegeneration - multiple diseases
    125352650
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:plop03036]
    125352650
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:plop04812]
    125352650
   04147 Exosome [BR:plop04147]
    125352650
Chromosome and associated proteins [BR:plop03036]
 Eukaryotic type
  Centrosome formation proteins
   Microtubules and associated factors
    Other tubulins
     125352650
Cytoskeleton proteins [BR:plop04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulins
    125352650
Exosome [BR:plop04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   125352650
  Exosomal proteins of colorectal cancer cells
   125352650
  Exosomal proteins of bladder cancer cells
   125352650
SSDB
Motif
Pfam: Tubulin Tubulin_C Misat_Tub_SegII Tubulin_2 Tubulin_3
Other DBs
NCBI-GeneID: 125352650
NCBI-ProteinID: XP_048203819
LinkDB
Position
6:complement(11149683..11153416)
AA seq 453 aa
MREIVYMQAGQCGNQIGAKFWEILSDEHSIDCIGSYHGESNLQLQRIEVYFNEAAGESLV
PAGNKYVPRAIMVDLEPGTLDSVRSGPFGQIFRPDNFIFGQSGAGNNWAKGHYTEGAELV
DSVLDVVRRESERCDCLQGFQLAHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVMPSP
KVSDTVVEPYNAILSVHQLLENADETFCMDNEALYDICFRTLKLPTPTYGDLNHLVSATM
SGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRASQQYRALTVPELTQQM
FYAKNMMVACDPCQGRYLTAAAIFRGRMSMKEVDEQMFNMQSKNSSYFVEWIPNNVKTAV
CDIPPRGLKMSATFIGNNTAIQEPFKRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAES
NVCDLVSEYQQYQEATADEQGVFEEEDFVEEEA
NT seq 1362 nt   +upstreamnt  +downstreamnt
atgagggagatcgtgtacatgcaggcaggccagtgtggcaaccagattggcgcaaagttt
tgggaaattctaagcgatgaacacagtattgactgcattggcagctaccacggagaaagc
aacctgcagctgcagagaatcgaggtgtacttcaatgaggcagcgggtgagtctcttgtt
cccgcaggcaacaagtatgtcccacgggccatcatggtggacctagagcccggcaccttg
gactccgtgaggtcaggaccatttggccagatcttcaggccagacaacttcatattcggc
cagagcggggcaggcaataactgggccaagggccactacacagagggagcggagctggtg
gactccgtcctcgatgtggtgaggagggagtcggagaggtgtgactgtctgcagggcttc
cagctggcccattccctgggcggtggcacgggctcgggcatgggcaccctgctcatcagc
aagatccgagaggagtaccccgaccgcatcatgaacaccttcagcgtcatgccctcgccc
aaggtgtcggacacggtggtggagccctacaacgccatactgtctgtccaccagctactg
gaaaatgcggatgaaaccttctgcatggacaacgaggccctgtacgacatctgcttccgc
accctgaagctgcccacccccacctacggcgacctcaaccacctggtgtcggccaccatg
agcggggtcaccacctgcctgcgcttcccgggccagctgaacgcagacctgcgcaagctg
gccgtcaacatggtgcccttcccgcgcctgcacttcttcatgccgggcttcgccccgctc
accagcagggccagccagcagtaccgggcgctcacggtgcccgagctcacccagcagatg
ttttatgccaagaacatgatggtcgcctgtgacccctgccaaggccgctacctgacggca
gctgccatcttccggggccgcatgtccatgaaggaggtggacgagcagatgttcaacatg
cagagcaagaacagcagctacttcgtggagtggatccccaacaacgtgaagacggccgtg
tgcgacatccccccgcgcggcctcaagatgtcggccaccttcatcggcaacaacacagcc
atccaggagcccttcaagcgggtctcggagcagttcaccgccatgttccggcgcaaggcc
ttcctccactggtacaccggcgagggcatggacgagatggagttcaccgaggccgagagc
aacgtctgcgacctggtgtctgagtaccagcagtaccaggaggccactgcggacgagcag
ggggtgtttgaagaagaggacttcgtggaggaagaggcttaa

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