Perognathus longimembris pacificus (Pacific pocket mouse): 125352703
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Entry
125352703 CDS
T08928
Name
(RefSeq) tapasin
KO
K08058
TAP binding protein (tapasin)
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop04612
Antigen processing and presentation
plop05163
Human cytomegalovirus infection
plop05168
Herpes simplex virus 1 infection
plop05169
Epstein-Barr virus infection
plop05170
Human immunodeficiency virus 1 infection
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09150 Organismal Systems
09151 Immune system
04612 Antigen processing and presentation
125352703
09160 Human Diseases
09172 Infectious disease: viral
05170 Human immunodeficiency virus 1 infection
125352703
05168 Herpes simplex virus 1 infection
125352703
05163 Human cytomegalovirus infection
125352703
05169 Epstein-Barr virus infection
125352703
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Gene cluster
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Motif
Pfam:
C1-set
ig
Ig_3
Ig_2
Med5
Motif
Other DBs
NCBI-GeneID:
125352703
NCBI-ProteinID:
XP_048203937
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All DBs
Position
6:13026733..13032835
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AA seq
448 aa
AA seq
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MEPAGLLLAVALGLVTAASAGPTAIQCWFVEDAGRGSLAQKPAALLLRPGPQGPQPRPDL
DPKLYLLVEDPTGTLQAVFSRYPRSNPAPHCEISHFAPFPASVSWARGLTPKQSCPRALD
GAWLIVSLSSSVFKLSILLQPQLEPQQEPVPITKATVVLTVLTKTPVLQVQVGKDVIMDL
SFSYMPPTLEAAACLPPGPPPFGLEWRRQHRGKGHLLLAATPGLGGEMPEAQEGAVAFAA
WDDDEPWGPWTGNGTFWLPAVQPFQEGTYLATVHLPYLQGQVTLELSMHKPPKVSLMPAP
LVWAAPGEAPPELTCQVSHFYPFEGLEVEWELRGGPEGGSQKAEGKRWLQSPRHHSNGTI
SLLAHLQPLPVTTEQHGARYACRVRHPSLKASGHSAEVTLQVVGLTGPSVEDGVGLFLSA
FLLLGLIKAVGWVAAYQTMSKDTEKKTR
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atggagcccgccggcctgctcctggctgtggctttgggcctggtgactgccgcctcggca
ggacccacggcgatccagtgctggttcgtggaggacgcaggccggggtagcttggcccag
aaacccgctgctctgctgctgcgtcccggaccccagggccctcagcccaggccggacctc
gaccctaaactctacctcctagtggaagaccccacaggcaccctgcaggctgtcttcagt
cggtaccccaggagcaatccagctccacactgcgagataagccacttcgccccattccca
gcctctgtgagttgggccagaggcctgacacctaagcagagctgtccccgggctctggat
ggagcttggctgattgtcagcctgtcgagctctgtctttaaactctccatcctcctgcaa
ccacagctggaacctcagcaggagcctgtacccatcaccaaggccacagtggtgctgact
gtcctcactaaaactcctgtccttcaagtccaggtggggaaagatgtcataatggacttg
agcttctcttacatgccccccaccctcgaggctgctgcatgtctgccccctggtccccct
ccctttggcctggagtggcgacgccaacacaggggtaaagggcatctgctcctggctgca
actcctggactgggtggagagatgccagaggcccaagagggagcagtggcatttgctgcg
tgggatgatgatgagccttggggcccgtggactgggaatggcaccttctggctgccggcg
gtgcaaccctttcaggaaggcacttacctagccacagttcacctgccctacctacaagga
caggtcaccctggagctctctatgcacaagccccccaaagtgtccctgatgccagcaccc
cttgtatgggctgccccaggggaggcacccccagagctgacctgccaggtgtcccacttc
tacccctttgaaggcctggaggtggagtgggagctccggggtggcccagagggtggctct
cagaaagctgaagggaagaggtggcttcaatctccccgccaccattccaatggcactatc
agtctcttggcgcacctgcagccacttccagtcaccaccgagcagcacggagcacgctat
gcctgtcgagtgcgccatcccagcctgaaagcctcagggcacagtgcagaggtcaccctg
caggtggtaggcctgactggaccctccgttgaagatggtgtaggcctcttcctgtcagcc
tttctcttgctgggattaatcaaggctgtgggctgggttgctgcctaccagaccatgagc
aaggatacagagaagaaaacacggtga
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