KEGG   Perognathus longimembris pacificus (Pacific pocket mouse): 125352712
Entry
125352712         CDS       T08928                                 
Symbol
Rxrb
Name
(RefSeq) retinoic acid receptor RXR-beta isoform X1
  KO
K08525  retinoid X receptor beta
Organism
plop  Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop03320  PPAR signaling pathway
plop04659  Th17 cell differentiation
plop04919  Thyroid hormone signaling pathway
plop04920  Adipocytokine signaling pathway
plop04928  Parathyroid hormone synthesis, secretion and action
plop05200  Pathways in cancer
plop05202  Transcriptional misregulation in cancer
plop05207  Chemical carcinogenesis - receptor activation
plop05216  Thyroid cancer
plop05222  Small cell lung cancer
plop05223  Non-small cell lung cancer
plop05226  Gastric cancer
plop05417  Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:plop00001]
 09150 Organismal Systems
  09151 Immune system
   04659 Th17 cell differentiation
    125352712 (Rxrb)
  09152 Endocrine system
   04920 Adipocytokine signaling pathway
    125352712 (Rxrb)
   03320 PPAR signaling pathway
    125352712 (Rxrb)
   04919 Thyroid hormone signaling pathway
    125352712 (Rxrb)
   04928 Parathyroid hormone synthesis, secretion and action
    125352712 (Rxrb)
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    125352712 (Rxrb)
   05202 Transcriptional misregulation in cancer
    125352712 (Rxrb)
   05207 Chemical carcinogenesis - receptor activation
    125352712 (Rxrb)
  09162 Cancer: specific types
   05226 Gastric cancer
    125352712 (Rxrb)
   05216 Thyroid cancer
    125352712 (Rxrb)
   05222 Small cell lung cancer
    125352712 (Rxrb)
   05223 Non-small cell lung cancer
    125352712 (Rxrb)
  09166 Cardiovascular disease
   05417 Lipid and atherosclerosis
    125352712 (Rxrb)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:plop03000]
    125352712 (Rxrb)
  09183 Protein families: signaling and cellular processes
   03310 Nuclear receptors [BR:plop03310]
    125352712 (Rxrb)
Transcription factors [BR:plop03000]
 Eukaryotic type
  Zinc finger
   Cys4 hepatocyte nuclear factor 4-like
    125352712 (Rxrb)
Nuclear receptors [BR:plop03310]
 2. Hepatocyte nuclear factor 4 like
  2B. Retinoid X receptor (RXR)
   125352712 (Rxrb)
SSDB
Motif
Pfam: Hormone_recep zf-C4 Nuc_recep-AF1 tRNA_bind_3
Other DBs
NCBI-GeneID: 125352712
NCBI-ProteinID: XP_048203951
LinkDB
Position
6:13094775..13101990
AA seq 414 aa
MPPPPLGSPFPVISSSMGSPGLPPPAPPGFSGPVSSPQINSTVSLPGGGSGPPEDVKPPV
LGVRGLHCPPPPGGPGAGKRLCAICGDRSSGKHYGVYSCEGCKGFFKRTIRKDLTYSCRD
NKDCTVDKRQRNRCQYCRYQKCLATGMKREAVQEERQRGKDKDGDGEGAGGAPEEMPVDR
ILEAELAVEQKSDQGVEGPGGTGGSGSSPNDPVTNICQAADKQLFTLVEWAKRIPHFSSL
PLDDQVILLRAGWNELLIASFSHRSIDVRDGILLATGLHVHRNSAHSAGVGAIFDRSLSR
VLTELVSKMRDMRMDKTELGCLRAIILFNPDAKGLSNPSEVEVLREKVYASLETYCKQKY
PEQQGRFAKLLLRLPALRSIGLKCLEHLFFFKLIGDTPIDTFLMEMLEAPHQLA
NT seq 1245 nt   +upstreamnt  +downstreamnt
atgccaccacctccactgggttcccctttcccagtcatcagttcttccatggggtcccct
ggtctgccccctccagctcccccaggattttccgggcctgtcagcagcccacagattaac
tcaacagtgtcgcttcctgggggtgggtctggcccccctgaagatgtgaagccaccagtc
ttaggggtccggggcctgcactgtccaccccctccaggtggccctggggctggcaaacgg
ctatgtgcaatctgcggggaccgaagctcaggcaaacactatggagtttacagctgtgag
ggctgcaagggcttctttaagcgcaccatccgtaaggacctcacctactcatgccgggac
aacaaagactgtacggtggacaagcgccagcggaaccgttgtcagtactgccgctatcag
aagtgcttggccactggcatgaagagggaggcggtacaggaggagcgtcaacggggaaag
gacaaggacggggatggggaaggggctgggggagcccctgaggagatgcccgtggacagg
atcctggaggcagagcttgctgtggagcagaagagtgaccagggcgttgagggtcctggg
ggaaccgggggtagcggcagcagcccaaatgaccctgtgactaacatctgtcaggcagct
gacaaacagctattcacgcttgttgagtgggcgaagaggatcccccatttttcctctctg
cctctggatgaccaggtcatattgctacgggcaggctggaatgagctcctcattgcttcc
ttctcccaccggtccattgatgtccgagatggcatcctccttgccacaggtcttcatgtg
caccgcaactcagcccattccgcaggcgtgggagccatctttgatcggtccctctccagg
gtgctgacagagctagtgtccaaaatgcgtgacatgaggatggacaagacagaacttggc
tgcctgcgggcaatcattctttttaatccagatgcgaagggcctctccaatcccagtgag
gtagaagtccttcgagagaaagtatatgcatcactggagacctactgcaaacagaagtac
cctgagcagcagggacggtttgccaagctgctgctacgtcttcctgccctccggtccatc
ggccttaaatgtctagagcatctgtttttcttcaaactcattggtgacacccccattgac
actttcctcatggaaatgctggaggctcctcaccagctggcctga

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