Perognathus longimembris pacificus (Pacific pocket mouse): 125352834
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Entry
125352834 CDS
T08928
Symbol
Trim15
Name
(RefSeq) tripartite motif-containing protein 15
KO
K12005
tripartite motif-containing protein 15
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
plop04121
]
125352834 (Trim15)
Ubiquitin system [BR:
plop04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
125352834 (Trim15)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
SPRY
zf-B_box
zf-RING_UBOX
zf-C3HC4
Trm112p
zf-C3HC4_4
zf-C3HC4_2
Apolipoprotein
Fib_alpha
zf-C3HC4_3
DUF4618
zf-RING_5
DASH_Spc19
MbeD_MobD
Prominin
kleA_kleC
zf-RING_2
Motif
Other DBs
NCBI-GeneID:
125352834
NCBI-ProteinID:
XP_048204174
LinkDB
All DBs
Position
6:complement(14804163..14810826)
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AA seq
467 aa
AA seq
DB search
MPSTPCMQGSHHTAACPVCRGPLRDAVTPSCGHACCRLCLPPSAQMGAQPSKFLLCPLCQ
EEEEEEQTDPRQAPVPLGPLGETYCEEHGEKIYFFCENDAELLCVFCREGASHQAHTVGF
LDEAIQPYRDRLRSRLESLIMERDKIEDIKCQENQKIQVLLTQMESKKQQVEAAFERLQQ
DLENQRHFLLVRLRELEQEIWKERNDYIAKVSEEVDRLGAQVEELEEKCRQPASELLQDV
RVNQSRCEMKTFVSPDAISSDLIKKIRDIHRITLTLPEMMRTFSETLVHHLETDSGIITL
DPETASPSLVLSEDRKSVRYTRQRRKLPDSALRFDGLPAVLGRPGFTSGRHRWQVEVQLG
EGGGCTVGVAAEEARRKGEMELSADQGIWAVVISHHQCWASTSPGTDLTLSSIPGRVDVT
LDYEEGLVSLLDADTQAPLFTFTASFCTTVFPFFAVWKKGSRLTLKG
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atgccctcaactccatgcatgcaggggagccaccacacggctgcctgtcccgtctgcaga
gggcccctgcgtgatgcggtgacccccagctgtggacacgcttgctgccggctctgcctc
cctccgtcggcccagatgggggcccagccaagcaagttcctgctctgccccttgtgccag
gaggaggaggaggaggagcagacagaccccaggcaggccccagtacccctgggccctctg
ggggagacttactgtgaggagcatggggagaagatctacttcttctgtgagaatgatgct
gagctcctctgcgtgttctgccgggagggagcctcccatcaggcccacaccgtgggcttc
ctcgatgaggccattcagccctaccgggatcgtctcaggagtcgactagaatctctgatc
atggagcgggacaagatagaagacataaagtgtcaagaaaaccagaagatccaagtgctt
ctgactcagatggaaagcaagaagcaacaggtagaagcagcctttgagaggctgcagcag
gatctggagaaccagcggcatttcctgctggtcaggctgagggagctggagcaggagatc
tggaaagagaggaatgactacatcgcaaaggtctctgaggaagtcgacaggcttggcgct
caggtagaggagctggaggagaagtgtcggcagccagcaagtgagcttctgcaagatgtc
agagtcaaccagagcaggtgtgaaatgaagacttttgttagtccagatgctatctcttct
gaccttattaagaagatccgagacatccacaggataacactcacccttccagagatgatg
aggacgttttcagaaaccctggtgcatcacctggaaacagactcagggatcatcactctg
gacccagagacggccagcccgagcctggtcctctctgaggacagaaaatccgtgagatac
acgcggcagaggcggaagctgcccgacagcgccctgcgcttcgacggcctcccggcggtc
ctggggcgcccgggcttcacgtcggggcgccaccgctggcaggtggaggtgcagctgggc
gagggcggcggctgcacggtgggggtggcggccgaggaggcgaggaggaagggcgagatg
gagctgagcgccgaccagggcatctgggccgtggtcatctcgcaccaccagtgctgggcc
agcacctcgcccggcaccgacctgacgctgagcagcatcccgggccgcgtggacgtcacc
ctggactacgaggagggcctcgtgagcctcctcgacgccgacacccaggcgcccctcttc
accttcaccgcctccttctgcaccaccgtcttccccttcttcgccgtctggaaaaagggc
tcccgcctcaccctgaaaggctga
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