Perognathus longimembris pacificus (Pacific pocket mouse): 125352991
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Entry
125352991 CDS
T08928
Symbol
Nup153
Name
(RefSeq) nuclear pore complex protein Nup153
KO
K14296
nuclear pore complex protein Nup153
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop03013
Nucleocytoplasmic transport
plop03250
Viral life cycle - HIV-1
plop05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
125352991 (Nup153)
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
125352991 (Nup153)
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
125352991 (Nup153)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
plop03019
]
125352991 (Nup153)
Messenger RNA biogenesis [BR:
plop03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
125352991 (Nup153)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup153
Zn_ribbon_RanBP
Nup_retrotrp_bd
Motif
Other DBs
NCBI-GeneID:
125352991
NCBI-ProteinID:
XP_048204373
LinkDB
All DBs
Position
6:23534614..23585825
Genome browser
AA seq
1470 aa
AA seq
DB search
MASGAGGIGGGGGGKIRTRRCHQGPIKPYQQGRPQHQGILSRVTESVKNIVPGWLQRYFN
KNENACSCSTDANEVPHWSENREDDHMIFADEESSNINDGRITPEPAVGNTEEPSTTSTA
SNYPDVLTRPSLHRSHLNFSMLETPALHCQPSTSSAFPIGSSGFSLVKEIKDSTSQHDDD
NISTTSGFSSRASDKDIAVSKNTSLPPLWSPEADRSHSLSQHTATSSKKPAFNLSAFGTL
SPSLGNSSILKASQLGDSPFYPGKTTYGGAAAAARQSKLRNTPYQAPVRRQMKAKQLNAQ
SYGVTSSTARRILQSLEKMSSPLADAKRIPSAVSSLNFPFNRSGIDTTVFQAKTEKVDSQ
YPPVQRLMTPKPVSIATNRTVYFRPSLTPSGELRKTNERIDKKHSTMYEKTTSRQNREHE
SSFSYPNFSIPATNGLSSGVVGGGGGKMRRERTRFVASKPPEEEEMEVPVLPKISLPINS
SSLPTFNFSSPVNTTSSPSPISPSQSLTNKVQMTSPGSTGSPMFRFSSPIVKSTEADVLL
PPPSIGFTFSVPVAKTEISCSSSTSEPIRSTSAQDNIALNSTSCKKRDEEYEGPFRPAKI
QKEGSVLDILKNPGFTSPKVDSLAAQPTTTTSPVVYTRPAISTFSSGGIGFGESLKTGSS
WQCDTCLVQNKVTDNKCIACQAAKLPPRETAKQSGIGTPSKSGKATSASGTGFGDKFKPA
TGTWDCDTCLVQNKPEAVKCVACETPKPGTGVKRVLTLTVVSESPETMTASASSCTVTTG
SLGFGDKFKRPVGSWECPVCCVSNNAEDNKCVSCMSEKPGSSVPVSSSSAVPVSLSSGGC
LGLDKFKKPEGSWDCEVCLVQNNADSTKCVACESAKPGMKSEFKGFGGTSSPSLNPAASS
FKFGITSSGPSQTLTSTGNFKFGDQEAFKIGVTSDSGSINSMNESFKFSKPTGDFKFGIS
SDSKPEEVKKDSQNDNTFKFGFCSGLSNPVSSTPFQFGVSSLGQQEKKEELPKSSSSGFS
FGTVVSNPTPVATDTAVTSESKSTFSFGTIETKSVSVSPFTCKMEAKKEELPAAKGGFTF
GNMESASLPTASVFALGRTGEKQQEPVTSTSLVFGKKVDNQEPKCQQVFSFGNSEQTKDE
SSSKSTFSFNMTKPPEKESEQPVKATFAFGAQTSTTADQGAAKTVFNFLNSSSSSSTPTT
SAGGGIFGSSTSSSNPPVAAFVFGQASNPVSSSAFGNSAESSTSQSLLFSQDSKPATTSS
TGSAVTPFVFGPGASSNNTATSGFSFGATTTSSAAGSSFVFGTAPSAPSASPAFGANQTP
TFGQTQGASQPNPPSFGSISSSTALFPAASQPAPPTFGTVSSSSQPPVFGQQPSQSAFGS
GSAPNSSSVFQFGSSTTNFNFTNNNPSGVFTFGANPSTPAASAQPSGSGGFAFNQSPAAF
TVGSNGKNMFSSSGTSVSGRKIKTAVRRRK
NT seq
4413 nt
NT seq
+upstream
nt +downstream
nt
atggcctccggagccggaggaataggagggggcggtggcggcaagatccggacgcggcgc
tgccaccaggggccaattaagccttaccagcaggggcgaccacagcatcagggcattctt
agtagagttacagaatctgttaagaacattgtgccaggttggctacaaagatacttcaat
aagaatgaaaatgcatgtagctgttcaacagatgcaaatgaagtaccacactggtcagaa
aatagagaagatgaccatatgatctttgctgatgaagaaagctcaaatattaatgatggg
agaatcacccctgagccagcagttggcaatacagaagaaccatcaacaaccagtactgct
tcaaattatccagatgtattaacaaggccttctcttcatcggagtcacctgaatttctcc
atgttggaaacccctgcattacactgtcagccatccacatcctctgcgttcccaatcggc
agttctggattttcccttgtaaaggaaattaaagattctacctctcagcatgatgacgat
aacatctcaaccaccagtggtttttcttcaagagcttctgataaagacatagcagtttca
aagaacacttccttgccacctctttggtccccagaagctgatcgttctcattcactctca
cagcatactgccaccagctcaaaaaaaccagcatttaacttgtctgcctttggaacactg
tccccttcacttgggaattcttcaattcttaaagcaagtcagcttggagattctcctttc
tatccaggaaaaacaacgtatgggggggcagcagcagctgcaagacagtccaaactacga
aatacaccttatcaggcaccagttagaagacagatgaaagctaagcagcttaatgcacaa
tcttacggtgtgaccagttccacagctcgacggatattgcagtctttagagaagatgtca
agccctctagcagatgcaaaaagaattccatctgctgtttcttctctaaattttcctttc
aatagaagtgggatagatactacagtttttcaggccaaaacagaaaaggtggactctcag
tatccccctgttcagagacttatgaccccaaagccagtttccatagcaacaaataggact
gtctattttagaccatctctaaccccatctggtgaattaaggaagacgaatgaaaggata
gataaaaagcacagtactatgtatgaaaaaacaacatcaagacaaaatagagaacacgaa
agtagcttttcgtacccaaatttcagtattcctgcaaccaatggcttatcatctggagta
gtaggtggtggaggtggcaagatgagacgagagagaacacgttttgttgcttctaaacct
ccagaggaagaggaaatggaagtaccagtgttaccgaaaatctctctaccaatcaacagt
tcttcacttcctaccttcaattttagctctcctgtgaatacaacttcctctccctcgccc
atcagcccttctcaatcattgacaaacaaggtacaaatgacctccccaggcagcactggc
agtcctatgttcagattttcatctccaattgtaaaatctactgaggcagatgtactacta
cctccaccatctattggatttacatttagtgtgcctgttgcaaaaacagaaatttcttgc
tctagcagtacttcagaaccaattagaagtacttcagctcaagataacattgcattgaac
agtacaagctgtaagaagcgagatgaagaatatgagggcccttttagacctgccaaaatc
cagaaagaaggaagtgttctagatattctgaaaaaccctggtttcacatcaccaaaggta
gattctcttgctgctcaacctactactactacaagcccagtagtttatacaagaccagca
ataagtaccttttcttctggtggaattggatttggagaaagtttaaaaactggatcctcc
tggcagtgtgatacatgtcttgtccagaacaaagtaacagacaataagtgtatagcttgc
caagcagcaaaattgccaccaagagaaactgctaagcagtctggaattgggacaccaagc
aaaagtggcaaagcaacttctgcatcagggacaggctttggagacaaatttaaaccagca
acgggaacttgggactgtgacacctgtttagtgcaaaacaagcctgaagcggtaaaatgt
gttgcctgtgaaacaccgaagcctggaactggtgtgaagcgagtccttacattgacagtg
gtttcagaaagtcctgaaacaatgactgcttcagcttccagttgtactgtgaccactggt
agcttaggattcggagataaattcaaaaggcctgtgggatcttgggagtgtccagtatgc
tgtgtttctaataatgctgaagacaacaaatgtgtgtcttgtatgtctgagaaacctgga
agttccgtacctgtttcaagtagcagtgctgtacctgtctctctatcttctggaggctgt
ctaggattagacaagttcaaaaagcctgagggcagctgggactgtgaagtgtgcctagtg
cagaataatgcagactccactaaatgtgtagcatgtgaaagtgcaaagccaggcatgaaa
tctgaatttaaaggctttggtggtacttcatccccatctttgaatccagcggcttcctcc
tttaaatttggcatcacatcttctgggccatctcagaccttaacaagcactggaaatttt
aaatttggagatcaggaagcatttaaaataggtgttacatctgactctgggtctattaac
tccatgaatgaaagctttaaattttctaaaccaactggagattttaaatttggaatttca
tctgattctaaacctgaagaagttaagaaagacagtcagaatgataacacttttaagttt
gggttttgttctggtttaagcaacccagtttcttcaacaccatttcagtttggggtgtct
agccttgggcagcaagaaaagaaagaggaattgcctaaatcttcctcttcaggctttagc
tttggtacggtcgttagtaaccccactcctgttgctactgacactgcagtgacctcggag
agcaagagcaccttcagctttggaactatagaaaccaagagtgtctcagtgtctcctttc
acgtgtaaaatggaagcaaaaaaagaagagctacctgctgccaagggagggttcactttt
ggcaatatggaatctgcctctctgccaactgcctccgtgtttgctctaggaaggacagga
gagaaacagcaagagcctgtcacttctacttctctagtgtttgggaagaaagtggacaac
caggagccaaagtgtcaacaagtattttcctttgggaattcagaacaaaccaaagatgag
agttcttcaaaatcaacctttagtttcaatatgacaaaaccgcctgagaaggaatcagaa
cagccagtgaaggccacttttgcctttggagctcaaaccagtactacagctgatcaaggt
gcagcaaaaacagtttttaacttcttgaacagttcctctagttcaagtaccccaactact
tcagcaggtggtggcatatttggtagttccacctcttcctccaacccacctgtggctgcc
tttgtgtttggacaggccagcaatcctgtgagcagctctgcctttggtaactctgctgaa
tccagtacatctcagtctttgctattttctcaggatagcaaaccagctactacatccagc
acaggttcagctgtcaccccatttgtctttggaccaggagccagcagtaataatactgca
acctctgggttcagctttggagccacaaccacatctagtgctgcaggatcctcatttgtg
tttggcactgcaccttcagcaccatctgccagtccagcatttggtgctaaccagaccccc
acatttggacaaactcaaggtgccagccagcccaaccctccaagctttggatctatatcc
tcttcaacagcattgtttcctgcagcttctcagcctgcgccacctacatttggaacagta
tcaagcagtagccagcctcctgtgtttggacaacagcctagtcagtctgcatttggctct
ggttcagctcctaattccagttctgtattccagtttgggagcagcactacaaatttcaat
ttcacaaataataatccatcaggagtattcacatttggtgcaaatcctagcacacctgca
gcctcagcccagccttcaggctcagggggttttgcatttaaccagtctccagcggcattt
acagtggggtcaaatgggaaaaatatgttctcctcttctggaacttcagtttctggtcgc
aagataaagactgctgttagacgtaggaaataa
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