Perognathus longimembris pacificus (Pacific pocket mouse): 125352995
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Entry
125352995 CDS
T08928
Symbol
Atxn1
Name
(RefSeq) ataxin-1
KO
K23616
ataxin 1/1L
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop04330
Notch signaling pathway
plop05017
Spinocerebellar ataxia
plop05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
125352995 (Atxn1)
09160 Human Diseases
09164 Neurodegenerative disease
05017 Spinocerebellar ataxia
125352995 (Atxn1)
05022 Pathways of neurodegeneration - multiple diseases
125352995 (Atxn1)
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Gene cluster
GFIT
Motif
Pfam:
ATXN-1_C
AXH
Motif
Other DBs
NCBI-GeneID:
125352995
NCBI-ProteinID:
XP_048204378
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Position
6:24179385..24591226
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AA seq
794 aa
AA seq
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MKSNQERSNECLPPKKREIPATSRPSEEKASAAPSDNHRAEGTAAAAAAWLPGHPGSRGP
GGGRHGPVGTSTELGLQQGIGLHKTLSTGLEYSPPSAPRSVPSATTLPAAYPPPPSGAPV
SPVQYAHLPHTFQFIGSSQYSGPYAGFLPSQLISPSANPVTSAVATAAGATTPSQRSQLE
AYSTLLANVGSLSQAAGHKIEPQPPPQQPQHLGRTPGLLAAGSPPPTPQNQYVHISSSPQ
SAGRTASPPAIPVHLHAHQAMIPHALALGPSSQVVVQYGGDSGGHFVPREPGKKTDGSSG
RLPQAKEVLNGEMEKGRRYGAPASADLGLGKASSKSLPHPYESRHVVVHPSPADYSSRDP
SGVRASVMVLPNSSAPASDLEVQPATHREASPSTLNDKSGLHLGKPGHHRSYALSPHTVI
QTTHSASEPLPVGLPATAFYAGTQPPVIGYLSGQQQAITYAGSLPQHLVIPGAQPLLIPV
GSPDLDTPGAASAIVTTSPQFVTTALPKSDNFNPEALVTQAAYPAMVQAQIHLPVVQSVA
SPATVPPTLPPYFMKGSIIQLANGELKKVEDLKTEDFIQSAEISNELKIDSSTVERIEDS
HSPGVAVIQFAVGEHRAQVSVEVLVEYPFFVFGQGWSSCCPERTSQLFDLPCSKLSVGDV
CISLTLKNLKNGSVKKSQPVDPASVLLKHAKPDSLMGSRHRYAEQENGINPGSTQLLSEN
GELKFPERTGLPAASFLTKTEPSKPTATRKRRWSAPETRKLEKSEDEPPLTLPKPSLIPQ
EVKICIEGRSNVGK
NT seq
2385 nt
NT seq
+upstream
nt +downstream
nt
atgaaatccaaccaggagcggagcaatgaatgcctgcctcccaagaagcgcgagatcccc
gccaccagccggccctcggaagagaaggccagcgccgcgcccagcgacaaccaccgggcg
gagggcacggcggcggcggcggcggcgtggctcccgggccatccgggcagccggggcccg
ggcggcgggcggcacgggccggtggggacttccaccgagcttggtttacaacagggaata
ggtttacacaaaacactgtccacagggctggagtactccccgcccagtgctcccaggtcg
gtgccgtcggccaccacgctgcccgcggcataccctccgccgccctcgggggccccggtg
tctccggtgcagtacgcccacctgccgcacaccttccagttcatcgggtcctcccagtac
agcgggccctacgccggctttctcccctcgcagttgatctccccctcggccaacccggtc
accagcgcggtggccacggccgcgggcgccaccactccatcgcagcgctcccagctggag
gcctattccactctgctggccaacgtgggcagcctgagccaggcagccggccacaagatc
gagccgcagccgccaccgcagcagccgcagcacctgggccggaccccggggctcctggcc
gcggggtcccctccgcccaccccgcagaaccagtatgtgcacatctccagctctccgcag
agcgcggggcgcacggcctccccgccggccatccccgtccacctccacgcgcaccaggcc
atgatcccgcatgcgctcgccctgggcccgtcctcccaggtggtggtgcagtacggcggc
gactccggcggccacttcgtcccccgcgagcccggcaagaaaaccgacggcagcagtggc
aggctgccgcaggccaaggaggtgttgaatggggagatggagaagggccggcgttacggc
gcgccggcctcggccgacctgggattgggcaaggccagcagcaaatcgcttcctcaccct
tacgagtccaggcacgtggtggtccatcccagccctgcggactatagcagtagagacccc
tcgggcgtccgcgcctcagtcatggtccttcccaacagcagcgcacccgcatccgacctg
gaggtccagccggccacgcaccgagaggcctccccctccaccctcaacgacaagagcggc
ctgcacctagggaagcccggccaccaccggtcgtacgcgttgtccccacacacggtcatt
cagaccactcacagcgcttcggagcctctcccggtgggactgccggccaccgccttctac
gcgggcactcagcccccggtcatcggctacctgagtggccagcagcaggctatcacctac
gcgggcagcctgccccagcacctggtgatccctggtgcccagcccttactcatcccagtg
ggcagtccggatctggacaccccaggggcagcctctgccatagtcaccacgtcgcctcag
ttcgtcaccaccgccctgcccaagagtgacaactttaaccccgaggccctggtcacacag
gctgcctacccagccatggtccaggctcagatccacctacctgtggtccagtcggtggcc
tcgcctgccaccgtgccccccacgctgccaccctacttcatgaaaggctccatcatccag
ctagccaacggggagctgaaaaaggtggaggatttgaagaccgaagacttcattcagagc
gcggagataagcaacgagctgaagatcgactccagcaccgtggagcggatcgaggacagc
cacagccccggggtggccgtgatacagtttgccgttggggagcaccgagcacaggtcagc
gttgaggttttggtagagtatcccttcttcgtgtttggtcaaggctggtcatcctgctgt
ccagagcgaacgagccagctcttcgatttaccatgttccaaactctccgttggggacgtc
tgcatctcgctcaccctcaagaacctgaagaatggctctgttaaaaagagccagcccgtg
gatcctgccagcgtcctgctgaaacacgccaagcccgacagcctgatgggcagtagacac
aggtatgccgagcaggaaaatggaattaatccgggaagtacccagctactctctgagaat
ggggaactgaagtttccagagagaacaggattgcctgcagcatccttcctcaccaaaaca
gaacccagcaagcccacggccacgaggaagaggaggtggtcagcacccgagacccgcaaa
ctggagaagtcagaagatgagccacctttgactcttcccaagccttctctaattcctcag
gaggttaagatctgcatcgaaggccgctccaacgtgggcaagtag
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