Perognathus longimembris pacificus (Pacific pocket mouse): 125353005
Help
Entry
125353005 CDS
T08928
Symbol
Jarid2
Name
(RefSeq) protein Jumonji isoform X1
KO
K11478
protein Jumonji
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop03083
Polycomb repressive complex
plop04550
Signaling pathways regulating pluripotency of stem cells
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
125353005 (Jarid2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04550 Signaling pathways regulating pluripotency of stem cells
125353005 (Jarid2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
plop03036
]
125353005 (Jarid2)
Chromosome and associated proteins [BR:
plop03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
125353005 (Jarid2)
Polycomb repressive complex (PRC) and associated proteins
PRC2.2
125353005 (Jarid2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
JmjC
ARID
JmjN
zf-C5HC2
Motif
Other DBs
NCBI-GeneID:
125353005
NCBI-ProteinID:
XP_048204394
LinkDB
All DBs
Position
6:complement(25181018..25415713)
Genome browser
AA seq
1248 aa
AA seq
DB search
MSKERPKRNIIQKKYDDSDGIPWSEERVVRKVLYLSLKEFKNAQKRQHGEGLAGSLKTVN
GLLGNDQSKGLGPASEQSENEKDDASQVSSTSNDVSSSDFEEGPSRKRPRLQAQRKFAQS
QPNSPSTTPVKIVEPLLPPPATQISDLSKRKPKTEDFLTFLCLRGSPALPNSMVYFGSSQ
DEEDVEEEDDETEDVKTATNNASSSCQSTPRKGKTHKHVHNGHVFNGSNRSTREKEPVQK
HKSKEATPGKEKHSDHRADRREQASAAQPAATPSSGSSAKGLAANHHHPPLHRSAQDLRK
QVSKVNGVTRMSSLGASATSAKKIREVRPSPSKTVKYTATVTRGTVTYTKAKRELAKETK
PNHHKPSSAVNHTISGKTESSNAKTRKQVLSLGGASKSTGPAVNGLKASSRLNPKSCTKE
VGGRQLREGLRNSKRRLEEAQQATTKPQSPPKKMKGASGSAEAPGKKAAASASASAEKPQ
LNGHVKKEVPERNLERNRPKRATAAKSTPGKQAHGKTDSASCENRSTSQPESLHKPHDPP
PSKPEKGGGKSGWASMDEIPVLRPSAKEFHDPLIYIESVRAQVEKYGMCRVIPPPDWRPE
CKLNDEMRFVTQIQHIHKLGRRWGPNVQRLACIKKHLRSQGITMDELPLIGGCELDLACF
FRLINEMGGMQQVTDLKKWNKLADMLRIPKTAQDRLAKLQEAYCQYLLSYDSLSPEEHRR
LEKEVLMEKEILEKRKGPLEGHTENDQHKFHPLPRFEPKNGLIHGVAPRNGFRSKLKEVS
QAPLKTGRRRLFAQEKEVVKEEEEDKGVLNDFHKCIYKGRSVSLTTFYRTARNIMNMCFS
KEPAPAEIEQEYWRLVEEKDCHVAVHCGKVDTNTHGSGFPVGKSEPFSRHGWNLTVLPNN
TGSILRHLGAVPGVTIPWLNIGMVFSTSCWSRDQNHLPYIDYLHTGADCIWYCIPAEEEN
KLEDVVHTLLQANGTPGLQMLESNVMISPEVLCKEGIKVHRTVQQSGQFVVCFPGSFVSK
VCCGYSVSETVHFATTQWTSMGFETAKEMKRRHIAKPFSMEKLLYQIAQAEAKKENGPTL
STISALLDELRDTELRQRRQLFEAGLHSSARYGSHDSSSAVADGKKKPRKWLQLETSERR
CQVCQHLCYLSMVVQENENVVFCLECALRHVEKQKSCRGLKLMYRYDEEQIISLVNQICG
KVSSKNGSIENCLSKPTPKRGPRKRATVDVPPSRLSASGSSKSASSSS
NT seq
3747 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaggaaagacccaagaggaatatcattcagaagaaatacgatgacagtgatggg
attccatggtcagaagaaagggtggtacgtaaagtcctttatttgtctctgaaggagttc
aagaatgctcagaagaggcagcacggggaaggccttgctgggagcctaaaaactgtgaat
gggctccttggtaatgaccaatctaagggattaggaccagcatcagaacagtcagagaat
gagaaggacgatgcatcccaagtgtcctctactagcaacgatgttagttcttcagatttt
gaagaagggccgtcgaggaaaaggcccaggctgcaagcacaaaggaagtttgctcaatct
cagccgaatagtcccagcacaactccagtgaagatagtggagcctttgctacccccgcca
gctactcaaatttctgacctctctaaaaggaagcctaagacagaagactttcttactttt
ctctgccttcgaggttctcctgcgctacccaacagtatggtatatttcggaagctctcag
gatgaggaggacgtcgaggaggaagatgatgagacagaagatgtcaaaacagccaccaat
aatgcttcatcttcatgccagtcaacccccaggaaaggaaaaacccacaaacacgttcac
aacgggcatgttttcaatggttccaacaggtccacacgggagaaagaacctgttcaaaaa
cacaaaagcaaagaggccactcccgggaaggagaagcacagcgatcacagggctgacagg
agggagcaggcctcggcagcccagcctgcggcgaccccctcctcaggctcctcggccaag
gggctcgctgccaaccaccaccacccccctctgcatcggtcggctcaggatttacggaag
caggtttctaaggtaaacggagtcactcgaatgtcatctctgggtgcaagtgcaaccagt
gccaaaaagatccgcgaagtgagaccttcaccatccaaaactgtgaagtacactgccacg
gtgacgcgggggactgtcacatacaccaaagccaagagggaactggccaaggaaaccaaa
cccaatcaccacaagcccagttcagccgtcaaccacacaatctcagggaaaaccgaaagt
agcaatgcaaaaacccgcaaacaggtgctatcccttgggggggcgtccaagtccaccggg
cctgccgtcaacggcctgaaggccagcagcaggttgaacccaaagtcatgcactaaggag
gtgggggggcggcagctgagggaggggctgcggaactccaagaggagactagaagaggca
cagcaggcgaccaccaagccgcagtcgccccccaagaagatgaaaggggcgtctggctcg
gccgaagcccctggcaaaaaggcggccgcgtcggcgtctgcctcggcagagaagccgcag
ctgaatggacacgtgaagaaggaagtgcccgagcgcaatctggagaggaatcggccgaag
cgggccaccgccgccaagagcacgccgggcaaacaagcacacggcaagacggacagcgcc
tcctgtgaaaatcgttctacctcgcaacccgagtccttgcacaagccgcacgacccgcct
ccgagcaagccggagaaagggggcggcaagtccgggtgggcgtccatggatgagatcccc
gtcctcaggccctccgccaaggagtttcatgacccactcatctacatcgagtcggtccga
gctcaggtggagaagtacgggatgtgccgggtcatcccccctccggactggcggcccgag
tgcaagctcaacgacgagatgcggtttgtcacgcagatccagcacatccacaagctgggc
cggcgctggggccccaacgtgcagcgactggcctgcatcaagaagcacctcagatctcag
ggcatcaccatggacgagctcccgctcataggaggctgcgagctcgacctggcctgcttt
ttccggctgattaacgagatgggcggcatgcagcaagtgactgacctcaaaaaatggaac
aaactagcagacatgctgcgcatccccaaaactgcccaggaccggctggccaagctgcag
gaggcctactgccagtacctgctctcctatgactcgctgtcgcctgaggagcaccggcgg
ctggagaaggaggtgctcatggagaaggagatcctggagaagcgcaaggggccgctggag
ggccacacagagaatgaccagcacaagttccacccgctgccccgctttgagcccaagaac
gggctcatccacggcgtggctccccggaatggcttccgcagcaagctcaaggaggtgagc
caggccccgctgaagacgggccggcgacgactgttcgctcaggaaaaggaagtggtcaag
gaggaggaggaggataaaggggtcctcaacgacttccacaagtgcatctataagggaagg
tctgtttctctgacgactttttatcgaacagcgagaaatatcatgaacatgtgcttcagc
aaggagcctgcgccagctgagattgagcaagagtactggaggctagtggaagagaaggac
tgccatgtggcagtacactgtggcaaggtggacacgaacactcatggcagtgggttcccg
gtgggcaagtcagagcccttttcaaggcatggatggaacctcaccgtcctccccaataac
acagggtccatcctgcgtcacctcggtgctgtgcctggagtgactattccctggctaaat
attggcatggtcttttctacctcatgctggtctcgagaccaaaatcaccttccatatatt
gactacttacacactggtgctgactgcatttggtattgcattcctgctgaggaggagaac
aagctggaggacgtggtccacaccctgctgcaggccaacggtaccccagggctgcagatg
ctggaaagcaatgtcatgatctccccggaggtgctgtgcaaagaggggatcaaggtgcac
aggacggtgcagcagagcggccagttcgtcgtctgcttcccagggtccttcgtgtccaaa
gtgtgctgtggctatagcgtctcagaaaccgtgcactttgctaccacccagtggacgagt
atgggcttcgagacggccaaggagatgaagcgccgccatattgccaagccattctccatg
gagaagctgctgtaccagattgcacaagcggaagcaaaaaaggaaaacggccccactctc
agtaccatctcagcccttttggatgagctcagggatacagagctgaggcagcgcaggcag
ctgttcgaagccggtcttcactcctccgcgcgctatggcagccatgacagcagcagcgcg
gtggcagatgggaagaaaaagcctcgaaagtggctgcagttggagacctcggagaggagg
tgtcaggtctgccagcacctgtgctacctgtccatggtggtgcaggagaatgagaatgtc
gttttctgcctggagtgcgccctgcgccatgtggagaagcagaagtcctgccgtgggctg
aagctgatgtaccgctacgacgaggaacaaatcatcagcctggtcaatcagatctgtggc
aaagtgtccagtaaaaacggcagcattgagaactgtctcagtaaacccacaccaaaaaga
ggcccccgcaagagagcgaccgtggacgtgccgccatcccggctgtcagcctccggctcc
tccaaaagtgcttcaagctcatcatga
DBGET
integrated database retrieval system
