Perognathus longimembris pacificus (Pacific pocket mouse): 125353276
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Entry
125353276 CDS
T08928
Symbol
Adamts13
Name
(RefSeq) LOW QUALITY PROTEIN: A disintegrin and metalloproteinase with thrombospondin motifs 13
KO
K08627
a disintegrin and metalloproteinase with thrombospondin motifs 13 [EC:
3.4.24.87
]
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop04611
Platelet activation
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09150 Organismal Systems
09151 Immune system
04611 Platelet activation
125353276 (Adamts13)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
plop01002
]
125353276 (Adamts13)
Enzymes [BR:
plop01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.24 Metalloendopeptidases
3.4.24.87 ADAMTS13 endopeptidase
125353276 (Adamts13)
Peptidases and inhibitors [BR:
plop01002
]
Metallo peptidases
Family M12: astacin/adamalysin family
125353276 (Adamts13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ADAMTS_CR_3
ADAMTS_spacer1
TSP1_ADAMTS
ADAMTS_CR_2
TSP_1
Reprolysin
Reprolysin_3
Reprolysin_5
TSP1_spondin
Adt-1
Reprolysin_4
Peptidase_M10
Reprolysin_2
Motif
Other DBs
NCBI-GeneID:
125353276
NCBI-ProteinID:
XP_048204782
LinkDB
All DBs
Position
1:159913815..159945352
Genome browser
AA seq
1580 aa
AA seq
DB search
MQPPASGLGYQESPQGRSFGLLPGGAARAISKARRNVCRRAESAVNGRTWSGAETKLREA
ERRAEERRLEEVEDREAGGVQWLSCHRLLASRGMSQLPPRGTGLPRHAAGIRGFLTGAFF
VLGCWGLSDFQQDFFQPLEPQEVSSYFGPDPNAAFAGLPSPGDILHLELLVAVGPDVYRA
LGEDTERCVLTNLNIGSELLRDPSLGAQFRVHLVKLMILTEPTDAPNITADISASLRSVC
EWSQTVNPAEDAAPGHADLVLYVTRFDLELPDGNRQVRGVTQLGGICSPSWSCLITKDTG
FNLGVTIAHEIGHSVGLQHDGTEGSGCPPRGHVMASDGAVSAGGGPGWSPCSRQQLRQLP
RYPPPSRGHAPPAPPSSPPGGLPAGFPQDARPGLYYDADQHCRAAFGPRAAACTFAREGL
DACQALSCHTDPLDPSSCRRLLVPLLDGTACGMEKWCSKGRCRSLAELGPVAAVHGRWSG
WGPGGPCSRSCGGGVVIRRRRCNNPRPAFGGRACVGADLQAEMCNTQACEKTQLGFMSEQ
CAQTDDRPLSLSQDSPNFYHWGAAAQYSQGDALCGHMCRALGESFMARRGDRFLDGTRCV
PGGAREDGTLSLCVSGSCRVGTCPALVFGCDGRMDSPRVWDACQVCGGDNSTCSPRNGSF
TAGRAGEYVTFLTVTPNVTRLHVVNRRPLFTHLAVRIQGRYVVAGEASMSASTAYPSLLE
DSRVEYRVTFTEDRLPSLEELHLWGPAQEDMEMQVYRRYGEEYGDLAQPDITFTYFQPKQ
QGARAWSAVRGPCSVSCGQPLLCPPGQLWVTYRCLDQAQKEWDECQGRPQPPGWTEPCVF
PPCPPSWAAGDSGPCSTSCGGGLRERLVRCAEAQCGLLGTLPPAQCGAAAPEPLAEVEPC
NTQPCPARRVWAGFPGRTRPDGEQGAWEPQDSPHAELSLQVDTRPLGGDAPFPTGNTRPG
AVHVWTPLAGPCSVSCGRGSRPLRFLCTDSVLRTPVQDELCDLASKPGGRQEVCQAGPCP
ARXSSSLLAAGGPQMSLALHCVRLHGGHTVPVPHSNPWRRLGEVTGGGGGVRACVGSPPP
GVFCPHRWKVLSLGPCSARCGPGSATRAVACVRRERGRDTEVDEALCAAPVRPPASVPRL
AAHCAFRWHLGTWTEMLRGRQFEATACQCRAASCQEETKVDGAVPVGRSLTAGVGGGGGG
PRHGHTRLGGKDPGRPGLAGCSSKHGGHGVGWTASDVTVSCGEGVQFRRHTCLEAQTPVP
ATFCQQHLPKPLTVRGCWVEPCGRPGTPSPAPHEEAAAPGPTTAAAAVAAGSLPWPQPQA
RARLRVPASRLPEAQESPAAHGTCGRQYLAPTGTIDLRGPGRADCEVAIGRPLGEVVSLQ
VLESSLNCSAGEALLLWGRFTWRKMCQRLPGATFLSKTNTLGVRQRRTRPGGGVVLWYRS
QAAPGTFHRECDTQLFGPWGEIASPSVSPDRRRAGGCRVLISSAPRARIAIRALVTVPAT
GTQETNASYVSIRDTYSLRTTAFVGQRAVSWESEGSEAEVELSQGFLEARASLHGRYWTV
PEAEPAQPGPALPVSGPRTP
NT seq
4743 nt
NT seq
+upstream
nt +downstream
nt
atgcagccaccagcgtcggggctgggctaccaggagagcccccaggggaggagctttggg
ctccttcccggaggagctgcccgggccatttcaaaggctcggcggaacgtgtgtcgccgg
gctgagtctgcagtgaatggccgcacatggtcaggtgcagaaacgaagctgcgggaggcg
gagagaagggcggaggagcggaggcttgaggaggtggaggaccgggaagcagggggtgtc
cagtggctctcctgccaccgactcctggcttcccgcgggatgagccagcttccgccccgt
gggacagggctccctcgccacgcagccggcattcggggttttcttaccggtgctttcttt
gtcctgggctgctgggggctctctgatttccagcaggatttttttcagcctctggagccc
caggaggtatcttcgtactttggccccgaccccaacgcagcctttgcaggtctcccatcc
cctggggacattctgcacctggagctgctggtggccgtgggccctgatgtctaccgggct
ctcggggaggacacggagcgctgtgtgctgacgaatctcaacatcgggtcggaacttctg
agggacccaagcctgggggctcagttccgcgtgcacctggtgaagctcatgatcctcacg
gagcccacggatgctccaaatatcacggccgacatcagcgcgtccctgcggagcgtctgt
gagtggagccagacggtgaaccccgcggaggacgcggcgcccgggcacgccgacctggtc
ctctacgtcacccggtttgacctggaattgcctgatggtaaccggcaggttcggggggtc
acccagctcgggggcatctgctccccctcctggagctgcctcatcaccaaggacaccggg
ttcaacctaggggtcaccatcgcccatgagattgggcacagcgtcggcctgcagcacgat
ggcaccgagggcagcggctgcccgccccgcggccacgtcatggcgtccgatggcgccgtg
tcggctggcgggggcccggggtggtctccctgcagccgccagcagctgcggcaactgccg
aggtacccacccccatcccgcggccacgcccctccggccccgccctcatcgccacctggg
gggcttcccgcgggcttcccccaggacgcacggcccggcctctactacgacgcggaccag
cactgccgcgccgcctttggcccccgggctgcggcctgcaccttcgccagggagggcttg
gatgcgtgccaggctctctcctgccacacggaccccctggaccccagtagctgccgtcgc
ctcctcgtccctctcctggacgggacggcctgtgggatggagaagtggtgctccaagggc
cgctgccgctcgctggcggagctggggcccgtggcggcggtgcacgggcgctggtccggc
tggggtcccggcggtccttgctcgcgctcgtgcggagggggcgtggtcatcaggaggcgg
cggtgcaacaaccccagaccggccttcggggggcgtgcgtgtgtcggagctgacctccag
gcggagatgtgcaacacccaggcttgtgagaagacccagctggggttcatgtcggaacag
tgcgcgcagacagacgaccggccgctgagcctctcccaggacagccccaacttctaccac
tggggagcggccgctcagtacagccaaggggacgctctctgcggccacatgtgccgggcg
cttggtgagagcttcatggcgaggcgtggagaccggttcctggacgggactcggtgtgtg
ccgggcggcgctcgggaggacgggacgctgagcctctgcgtgtccggcagctgcagggta
ggcacctgcccagcccttgtgtttggctgcgatggcaggatggactccccgcgggtgtgg
gacgcgtgccaggtgtgcggaggggacaacagcacgtgcagcccgcggaacggctccttc
acagccgggagagccggagagtacgtcacgttcctgacggtcacgcccaatgtcacccgg
ctgcacgtcgtcaaccgcaggcctctcttcacacacttggccgtgaggatccaagggcgc
tatgtcgtggctggggaggccagcatgtccgccagcaccgcctacccatccctcctggag
gacagccgggtggagtaccgagtgacgttcacggaggacaggctgcccagcctcgaggag
ctccacctgtggggaccggcccaggaagacatggagatgcaggtgtacaggcgctatggg
gaggagtatggagacctcgcccagccagacatcaccttcacctacttccagcccaagcag
cagggtgcccgggcgtggagtgccgtgcgtgggccctgctccgtgagctgcgggcagccc
ttgctctgccctccagggcagctctgggtgacgtacagatgcctggaccaagcccagaag
gagtgggatgagtgccaggggcgcccccagccgccggggtggaccgagccctgtgtcttc
ccgccctgccccccatcgtgggcagcgggagactctgggccgtgcagcacttcctgcggg
ggaggcctgcgggagcggctggtgcgctgtgcggaggcccagtgtggcctcctggggacg
ctgcctccggcccagtgcggagccgcggcccccgagccgctggccgaggtggaaccgtgc
aacacgcagccctgcccagccaggcgagtgtgggcgggcttccccggcaggacccggcca
gacggggagcagggagcgtgggaaccccaggacagcccacacgcagagctctccctgcag
gtggacacgaggcctctgggaggggacgctccattcccaacgggcaacaccaggccgggg
gctgtgcacgtgtggactccactggcggggccctgctccgtctcctgtgggcgaggctcc
cggccccttcgcttcctctgcacggattctgtcctccggacgcctgtccaggacgaatta
tgtgacttggccagcaagccggggggccggcaggaggtctgccaggccggcccatgtcct
gctaggtgaagctccagccttctagctgcaggtgggccgcagatgtctctggctctgcac
tgtgtgaggctgcacggaggccacacggttcccgtgcctcactccaacccatggcggcgg
cttggggaggtgacgggggggggtgggggggtccgagcctgcgtgggcagcccccccccc
ggggtcttctgtccccacaggtggaaagtcctgtccctcggcccgtgctccgcccgctgt
ggtcccggcagcgccacgcgtgcggtggcctgcgtgcggcgggagcgtggccgggacacg
gaggtggacgaggcgctgtgcgcggccccggtgcggcccccggccagcgtgccccgcctc
gccgcccactgcgccttccggtggcacctcggcacctggacggagatgctgcgaggccga
cagttcgaggccaccgcctgtcagtgccgtgccgcgtcgtgccaggaagagaccaaggtg
gacggggctgtccccgtggggcgctcgctcacggcgggggtgggcgggggagggggaggt
ccacggcacggccacacccgcctcggtgggaaggaccctgggcgtcccgggctggcagga
tgtagcagcaaacacgggggccacggagtgggctggaccgcgagcgacgtcaccgtctcc
tgtggtgagggcgtccagttccgccgccacacctgcctggaagcccagaccccggtgccc
gccaccttttgccagcagcacttgcccaagccgctcacagtgcggggctgttgggttgag
ccttgtggaaggccggggacccccagcccagccccccacgaggaagccgccgcccctggc
ccgaccaccgctgctgccgccgtggctgctggttctctcccgtggccccagccgcaggcc
cgggcccgactccgcgtcccagcctcccggcttccggaagcccaggagagcccggcagcc
cacgggacctgtggcaggcagtacctggcgcccacagggactatcgacctgcgaggcccg
gggcgcgcggactgtgaggtggccattgggcggccgctgggtgaggtggtgagcctccag
gtcctcgagagctccctcaactgcagtgcaggggaggcgctgctgctctggggccggttc
acctggaggaagatgtgccagcggctgccgggcgccacgttcctctccaagaccaacacg
ctgggagtgaggcagcggcgcacgcggcccggaggtggagtggtgctgtggtaccggagc
caggctgccccgggcaccttccacagagagtgcgacacacagctctttggaccctggggt
gaaatcgcgagcccctcagtgagtccggaccgcaggcgtgcagggggctgccgggtcctc
atcagctctgctccgcgggcccgcattgccatccgcgccctggtcaccgtcccggcgact
gggacccaggagaccaatgccagctatgtctcgatccgggacacctacagcctgaggacg
acagcctttgtcgggcagcgggcggtgtcctgggagtcggagggcagcgaggccgaggtg
gagttgagccagggcttcctagaggcgcgcgccagcctgcacggccgctactggactgtc
cccgaggctgagccggcccagcccggccccgccctcccggtctccgggccccggacgccc
taa
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