Perognathus longimembris pacificus (Pacific pocket mouse): 125353351
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Entry
125353351 CDS
T08928
Name
(RefSeq) LOW QUALITY PROTEIN: snRNA-activating protein complex subunit 4-like
KO
K09453
snRNA-activating protein complex subunit 4
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
plop03000
]
125353351
03021 Transcription machinery [BR:
plop03021
]
125353351
Transcription factors [BR:
plop03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-like factors
125353351
Transcription machinery [BR:
plop03021
]
Eukaryotic type
RNA polymerase III system
Other transcription-related factors
snRNA-activating protein complex (SNAPc)
125353351
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myb_DNA-binding
Myb_DNA-bind_6
HTH_Hrp3
Motif
Other DBs
NCBI-GeneID:
125353351
NCBI-ProteinID:
XP_048204922
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All DBs
Position
1:complement(161426508..161438187)
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AA seq
950 aa
AA seq
DB search
MAILQDLRQQIQAGLEMPSAHGPAEAEARRTQQPEAPGYLRRLHFSLKKGRWDAKEEEQL
IELIEKYGVGHWAKIASELPHRSGSQCLSKWKIMVGRKRSLRRQRRRPRRRARWSSSSSS
GGGSEDSADSSSTSSSSSSSSSSSSSESSEAELEESQGRGGALLPPQYTVPDIDLWVPAR
PRASQPHREGAAAPAAAVSEGSDAAPARPQDVPTAAPAGEPSFQGTRHHPERHPGPTPTR
HSPRKRGGAGLQAGKTEAASPARLAPRAWPWRPHGRVAPQEAVAAAPETRSTPEAPGAQA
SAGCDALADGIRMKLEHARLASTPVFTLFIQLLQIDTAGCMEVVRERKARPLPARQPGAP
APLQQALQEPSSVQSTPGRLLPAVPPQSTAQNTSPVGHAGLGSRRPESAASPVPAPAPWG
PRPKPKTVSELLREKRLRESRARKAAQGPVVLQPQLLVSSPVVLQPPLPAAAQGPPATCL
TIANPALSGPGTPLVASASPSGSWQEAGASAKGERPASLQAGSLAPALPGAQGTAPAACS
PPAPGPSPGPVSGPPGNPGPPRAPAASQEQSLPRVLPLFPAVPSPAPPLSLPPQGGAPLP
ASLPLPVTWVLTAQGLLPVPVPAVIGVSRPAATPDPAGLLAALPPPPAETPSPSPASADT
EPATSSGTLPPTGPPSQSPATERDPRPAPGVAQVAREASVSRASAPAGHTGAEPPRPSPP
PAHSAPGCRREPGGTPGKASGSLELRGPPSPERPEKGALDLGLLSQESEAAARKWLRGPR
GARVPQLESRLPYQPPALCNLRVLASLLLQKKALERRAASLLTRGPAQAGAEPEAGAVQA
SLGLVRRRLQDNPAYLLLKTRFLAALALPALLATLPPRGVPTTLSLATGVGLESDEDPGQ
LEGEDAAGSPAQGSPNPGKASAPSQPDASDDLDVLRTRRARHVRKRRRLL
NT seq
2853 nt
NT seq
+upstream
nt +downstream
nt
atggccatcctccaggacctccgccagcagattcaggccgggctggagatgcccagcgcc
cacgggcctgcggaagccgaagcccgcagaacccagcagccggaggcaccaggctatctc
agaagattacatttcagcttgaagaagggacgatgggatgcaaaagaagaggaacagtta
attgaattaatagagaaatacggtgttggtcactgggcgaaaattgcttctgaactcccc
catcgatcaggttcccagtgtctgagcaagtggaaaatcatggttgggaggaagcggagt
ctccgcaggcagcggcggaggccccgtcgcagggcccgctggagctccagcagcagcagt
ggcggcggcagtgaggacagcgctgacagcagcagcaccagcagcagcagcagcagcagc
agcagcagcagcagcagcgagagctcggaggcggagctggaagagtcccaggggcggggc
ggggcgctgttgcccccacagtacacagtaccagacattgacctgtgggttcctgcaagg
ccacgtgccagccagccacacagagaaggtgccgccgcccctgccgccgccgtctccgag
ggctctgatgccgcccccgctcgcccccaggacgtccccaccgctgctcctgccggggag
ccgtccttccagggtacacggcaccatcccgagaggcacccaggacccacacccaccaga
cactcgccccgcaagcgcggaggagccggcctgcaagcaggaaagacagaggcagccagc
cctgcccgcctcgcccccagggcctggccctggagaccgcatggacgcgtcgcacctcaa
gaggctgtggcagcagcgccggagacacgctctacgccagaggctcctggagcgcaagct
tctgctggctgtgacgccctggccgatggcatcaggatgaagttggagcatgcgcgccta
gccagcaccccggtgttcacgctgtttatccagctgctacagatcgacactgcaggctgc
atggaggtggttcgagagaggaaggcccggcctcttccagcacgccagcccggagcccca
gctccactgcagcaggctctgcaggagccctccagtgtccagagcaccccaggccgcctc
ttgccagccgtgccacctcagagcactgcacagaacaccagccccgtggggcacgcgggg
ctggggtcccgccgccccgagtctgccgcgtcccccgtgcccgcgcccgccccctggggc
ccccggcccaagcccaagacagtgtctgagctgctacgagagaagcggctccgggagtcc
cgggccaggaaggccgcccagggccccgtggtgctccagccccagctgctggtttcctcg
cccgtggtcctgcagccccctctgccagcagccgcccaggggcccccggccacgtgcctg
accatcgcaaacccggcgctgtctgggcctgggacccctctggtggccagtgcgagccct
tctggctcctggcaggaggctggggcttcagccaagggtgagaggcctgctagccttcag
gccgggtcccttgcccctgccctcccaggagcccagggcacagcccctgctgcctgcagc
ccgcctgccccgggccccagtccaggccctgtgagcggtcctccaggcaatccgggcccg
ccccgggcccctgccgcatcccaggagcagagcctgcccagagtcctgcctctcttcccc
gccgtccctagccctgctccgcccctcagcctgccgccccagggtggagctcccctgccc
gccagcctgcccctgccagtcacctgggtgctcacagcacaggggctgctccctgtgccc
gtgccagccgtgatcggcgtttccaggccagcggccacccccgaccctgcagggctgctg
gcagcactgccgccgcctcctgcagaaaccccgtccccgtccccagccagtgccgacacg
gagccagccacgtcctctggaacactccccccgacgggccccccatcccagagcccagcc
acagaacgcgatcctcgcccagcccccggagtggcccaggtggcccgcgaggcgtcagtg
tccagagcaagcgctccggctggccacacgggagcagagccccccaggccgagccccccg
ccggcccatagcgcccccggctgcaggcgagagccgggggggacaccagggaaagcctcg
gggtccctggagctcagagggcctccgagcccggagaggcccgagaagggcgccctggac
ctgggcctgctctctcaggagagtgaggctgccgcgcggaagtggctgaggggcccgcga
ggggcccgcgtgccccagctggagagcaggctgccctaccagccccccgccctgtgcaac
ctgcgcgtgctggccagcctgctgctccaaaagaaggccctggagcgcagggccgcctcc
ctgctgacccgggggccggcgcaggccggagccgagcccgaagccggagccgtgcaggcc
tccctgggcctggtgcggaggcggctccaggacaacccagcctacctcctgctgaagacg
cggttcctggcggccctggctctccccgcgctgctggccaccctgcctccccgcggcgtt
cccaccaccctgtcactggccacaggtgtgggcctggagagtgacgaggacccagggcag
ctggagggcgaggacgcggccgggagccccgcccaggggtccccaaaccctggcaaggcc
tccgccccttcccagccggatgcgtctgatgacctcgatgtgctcaggacgcgtcgcgcc
cgtcatgtccggaagcggaggcggttgctctga
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