Perognathus longimembris pacificus (Pacific pocket mouse): 125353483
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Entry
125353483 CDS
T08928
Symbol
Dhx35
Name
(RefSeq) probable ATP-dependent RNA helicase DHX35 isoform X1
KO
K13117
ATP-dependent RNA helicase DDX35 [EC:
5.6.2.6
]
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
plop03041
]
125353483 (Dhx35)
Enzymes [BR:
plop01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
125353483 (Dhx35)
Spliceosome [BR:
plop03041
]
Complex C
Other components
Complex C specific factors
125353483 (Dhx35)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
HA2_N
AAA_22
ABC_tran
DEAD
Cas3-like_C_2
AAA_19
AAA_7
nSTAND3
Motif
Other DBs
NCBI-GeneID:
125353483
NCBI-ProteinID:
XP_048205145
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All DBs
Position
6:71889257..71943736
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AA seq
714 aa
AA seq
DB search
MTFHPSMAAPLGPVKFWRPGTEGPGVSISEERQSVAENSSTTVVYNPYAALSIEQQRQKL
PVFKLRNHILYLIENYQTVVIVGETGCGKSTQIPQYLAEAGWTAEGRVVGVTQPRRVAAV
TVAGRVAEERGAVLGHEVGYCIRFDDCSNPLATRIKFLTDGMLVREMMVDPLLTKYSVIM
LDEAHERTLYTDIAIGLLKKIQKKRGDLRLIVASATLDAEKFRDFFNQNETNDSTRDTCV
ILTVEGRTFPVDIFYLQSPVPDYIKSTVETVVKIHQTEGDGDILAFLTGQEEVETVVSML
IEQARALARTGMKKHLRVLPMYAGLPSFEQMKVFERVSRSVRKVIVATNVAETSITISGI
VYVIDCGFVKLRAYNPRTAIECLVVVPVSQASANQRAGRGGRSRSGKCYRLYTEEAFDKL
PQSTVPEMQRSNLAPVILQLKALGIDNVLRFHFMSPPPAQSMVQALELLYALGGLDKDCR
LTEPLGMRIAEFPLNPMFAKMLLESGNFGCSQEILSIAAMMQIQNIFVIPSNQKSQAIRV
HRKFAVEEGDHLTMLNVYEAFIKHNKNSQWCQEHFLNYKGLVRAATVREQLKKLLVKFQV
PKKSSEGDPDPVLRCIVAGFFANAARFHSTGAYRTIRDDHELHIHPASVLYAEKPPRWVI
YNEVVQTSKYYMRDVTAIESAWLLELAPHFYQQGTVRRAVCPPLPQPPPPVEKY
NT seq
2145 nt
NT seq
+upstream
nt +downstream
nt
atgacctttcaccccagcatggctgcgcccttgggacccgtgaagttctggcgaccgggt
acagagggcccaggagtcagcatctccgaagagagacaaagtgttgccgaaaactcctca
acaaccgttgtttacaacccttatgctgctctttccatagagcagcagaggcagaagctg
cctgtgttcaagcttaggaatcatatcttgtacttgatagaaaattatcagacggtggtg
attgttggagaaacaggatgcgggaagagcacacagattcctcagtatctggcagaagct
ggctggacggcggaaggaagagtggttggagtaacgcagcctcggagggtagctgccgtg
acagttgcagggagagtagccgaggaaaggggtgcagtgttgggccacgaggtgggctac
tgcatccgctttgatgactgcagcaacccgctggcgacaaggattaagtttcttactgat
gggatgctggtgagggaaatgatggttgatccgttgctaacaaaatacagtgtcatcatg
ctggatgaagcccatgagaggactctgtacacggacattgccattggcttgctaaagaag
attcagaaaaagcgaggggaccttcggttgattgtggcttcagctactctggatgcagag
aaatttcgagatttctttaatcaaaatgaaaccaatgactcaaccagggatacgtgtgtg
atccttacagtggaagggcgaacgtttccggtggatatcttttatctgcaaagtcctgtt
ccagattatatcaaatcaactgtggaaactgtggtgaaaattcaccagacagagggagat
ggagacatactagcctttcttactggtcaggaggaagtagaaactgttgtgtctatgctg
attgagcaggcccgagcactggctcgcactgggatgaagaaacacctccgggttctcccc
atgtacgcagggctgccttcctttgaacaaatgaaagtgtttgaaagagtgtcacgaagt
gtcagaaaggtgattgtggctaccaatgtggcagagacctccattactatcagtggcatt
gtgtatgtgattgactgcggctttgtgaagctcagggcctacaaccccaggacagccatc
gagtgcttggtggtggtgcctgtgtcccaggcatcagctaaccagcgggcaggacgtggc
ggacgcagccgctctggaaagtgttaccgcctttatacagaggaagcctttgacaagttg
cctcagtctactgtgcctgagatgcagcgcagcaacttggctcccgtcatccttcagctg
aaagcactggggatcgacaatgtcctcaggttccacttcatgtcgccccctccagcacag
tcgatggtccaagctttggagttactctatgcattgggaggtctggacaaagactgtcgc
ctaactgaaccacttggcatgagaatagcagagtttcctttgaatcccatgtttgccaaa
atgctgcttgaatcaggaaattttggctgttctcaggaaattctaagcattgcggccatg
atgcagatccagaatatctttgtgatcccttcaaaccagaaatctcaggcaattcgtgtg
cacaggaaatttgctgtggaggaaggagaccacctcaccatgctcaacgtttatgaagca
tttatcaaacacaataagaactcccagtggtgccaggaacatttcctgaattacaagggg
cttgtcagagctgcaactgtgcgagaacagttgaaaaagctgcttgtgaagtttcaggtg
cccaagaagtccagcgaaggtgatccagatcccgtcctgagatgcatcgtcgcgggattc
tttgccaacgcagcgaggtttcattctactggagcttataggacaatccgtgatgatcat
gagctacacatccacccggcatctgtcctctacgcagagaagccgccacgctgggttatc
tacaatgaagtcgtgcagacctccaagtattacatgagagacgtgacggccatagaatct
gcctggctgctggagctggctccacacttctaccaacaaggaacggtaaggcgagctgtc
tgtcccccgctgccccagccaccacctcctgtcgagaagtattaa
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