Perognathus longimembris pacificus (Pacific pocket mouse): 125353695
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Entry
125353695 CDS
T08928
Symbol
Chd6
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 6 isoform X1
KO
K14436
chromodomain-helicase-DNA-binding protein 6 [EC:5.6.2.-]
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
plop03036
]
125353695 (Chd6)
Chromosome and associated proteins [BR:
plop03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
125353695 (Chd6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD6-9
Helicase_C
Chromo
ResIII
HTH_CHD1_Hrp3
DEAD
HDA2-3
MUN
Chromo_MIT1
Motif
Other DBs
NCBI-GeneID:
125353695
NCBI-ProteinID:
XP_048205311
LinkDB
All DBs
Position
6:complement(73693258..73834131)
Genome browser
AA seq
2715 aa
AA seq
DB search
MKMKIQKKEKQLSNLKVFNHSPMSDASVNFDDKSPSPFDCSTDQEEKIEDLASHCLSQKD
LYTAEEDTLFSRKMTSHNGMEDSGGRGTGVKKKRKKKEPGEQEGTAKGSKDREPKPKRKR
EPKEPKEPRKAKEPKKAKEPKELKQKDGSKKARKPREASGTKEAKEKRSCSDSATRTKSK
KASKEQGPTPVERKKKGKRKSETTLESLELDQGLRNPSLRSPEESTESADSQKRRSGRQV
KRRKYNEDLDFKVVDDDGETIAVLGAGRTSALSASTLAWQAEEPPEDDANIIEKILASKT
VQEVHPGEPPFDLELFYVKYRNFSYLHCKWATMEELEKDPRIAQKIKRFRNKQAQMKHIF
TEPDEDLFNPDYVEVDRILEVAHTKDAETGEEVTHYLVKWCSLPYEESTWELEEDVDPAK
VKEFESLQVLPEIKHVERPASDSWQKLEKSREYKNSNQLREYQLEGMNWLLFNWYNRKNC
ILADEMGLGKTIQSITFLSEIFLRGIHGPFLIIAPLSTITNWEREFRTWTEMNAIVYHGS
QISRQMIQQYEMVYRDAQGNPLSGVFKFHVVITTFEMILADCPELKKIHWSCVIIDEAHR
LKNRNCKLLEGLKLMALEHKVLLTGTPLQNSVEELFSLLNFLEPSQFPSETAFLEEFGDL
KTEEQVKKLQSILKPMMLRRLKDDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSFL
TKGANQHNMPNLINTMMELRKCCNHPYLINGAEEKILEDFRKTHSPDASDFQLQAMIQAA
GKLVLIDKLLPKLIAGGHKVLIFSQMVRCLDILEDYLIQRRYTYERIDGRVRGNLRQAAI
DRFCKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKAV
KVYRLITRNSYEREMFDKASLKLGLDKAVLQDINRKGSTNGVQQLSKMEVEDLLRKGAYG
ALMDEEDEGSKFCEEDIDQILQRRTHTITIQSEGKGSTFAKASFVASGNRTDISLDDPNF
WQKWAKIAELDTEAKNEKESLVIDRPRVRKQTKHYNSFEEDELMEFSELDSDSDERPTRS
RRLNDKARRYLRAECFRVEKNLLIFGWGRWKDILTHGRFKWHLNEKDMEMICRALLVYCV
KHYKGDEKIKSFIWELITPSKDGQAQTLQNHSGLSAPVPRGRKGKKTKNQLLLPELKNAD
WLATCNPEVVLHDDGYKKHLKQHCNKVLLRVRMLYYLKAEILGEAADKAFEGTPARELDV
PLPDIDYVEIPVDWWDAEADKSLLIGVFKHGYERYNAMRADPALCFLDKVGMPDEKSLSA
EQGVTDGTSDIPERGSPDKEDNAEDKLDGLQKQTESPGDGGGDAIFGEKKDDSRAAQDGS
DPDKSPWPVSSALTARLRRLVTIYQRCNRKEICRPEMLGPGNQGYWVQEEMFRRTSEMDL
IGKEAQKRWTRREQADFYRTVSSFGVIYDQEKKIFDWTQFRIISRLDKKSDESLEHYFYS
FVAMCRNVCRLPAWKEDGIPDATIYVEPITEERAAKTLYRIELLRKVREQVLRCPQLHER
LQLCRPSLYLPVWWECGKHDRDLLIGTAKHGLNRTDYYIMNDPQLSFLDAYRNYAQHKRT
DTQAPGSLCCLYQNNSKLYESLTYTQMSRTSESLESEPESVVKIESRDDHLGLPGGSLPR
ATCENFLSNAQDVVSVNHDESLLPESLEKMLYGKKGLSRDPGSFQESPGTNTESRKDAIT
ISTNRDGSCQRGSHEAEVDSSSSLMESLEAGVAQMNIKNGKHLLISLSKDGEPCCSEAGP
RPDSVGQLEDKGSASPAVDAESESGFVELCSLSVCDSKRNFSSDQQLIDLLESKSLESKL
ILSQNQSDEEEDEEENEEENLAVITRTRERPDVLRLPKPTPVLPRGKSRAFHLDEGKKGS
LEVVSQTPGPQRTFPPMTCQCHCKHMESWARGLGSEEFEVEKPKAYNPELFRSRANSATV
EREPTAIPSEPFKVKLFKDPWKENTEGKKGFPTYTSEGSEPKSEDMDFENKDDYDRDGTC
PSQDYPGKYSEEESKSSTSGIADLGDDTQEARAPTIAQLLQEKTLYSFSEWPKDRVIINR
LDNICHVVLKGKWPSCQPYEPSGTPPTPILASNAGSGNSFSEPEAAEHSFSNGAVLAAQL
QQESFVAPVFTKEEQKHRRPYEFEVERDSKARSLEQFSVTHGHPPIVLNGWHGESAIDLS
CSSEGSPGATSPFPVSASTPKIGAISSLQGTLGMDLSGILQAGLIHPVTGQIVNGSLRRD
DAATRRRRGRRKPVEGGMDLIFLKEQTLQAGILEVHEDPGQTTLSTTHPEGPGPASSAPE
PTGTANSQAEKAIPSKSLLDWLRQQADYSLDIPGFGASFSDKPKQRRPRCKEPGKLDVSS
LSGEERVPAVPKEPGLRGFLPENKFNHTLAEPVLRDAGSRRRGRRPRTDLLKGPAVVADS
PSGMGPLFMNGLIAGMDLVGLQNVRNMPGIPLTGLVGFPAGFATMPTGEEVKNTLSMLPM
MLPGVAAVPQMFGVGGLLNTPMATTCTSTAPASLSSTAKSGSAATEKTVEDKPSSRDVKT
DSLAEDKPGPSPFSDQSEPAITTSNPVAFNPFLIPGVSPGLLYPSMFLSPGMGMALPAMQ
QARHSEIAGLENQKRKKKKTKGDTPNPNPEPAPGCEREPGSDQNCTEASALLPPEREHVA
QAGEGVLKDSSATTN
NT seq
8148 nt
NT seq
+upstream
nt +downstream
nt
atgaagatgaaaatacagaagaaagagaagcagctgtcaaatttaaaagttttcaatcac
tccccaatgtctgatgcctctgtcaattttgatgacaaatccccatcaccatttgactgc
agcactgaccaggaagagaaaattgaagatcttgccagtcactgtctgtcccagaaagac
ctgtacactgctgaagaggatacccttttctctaggaaaatgacatcccacaatgggatg
gaagacagtgggggcaggggcactggggtaaagaagaaacggaagaaaaaggagccagga
gagcaagagggtacagccaaggggagcaaggacagggagcccaagccaaagaggaaacga
gagcctaaagagccaaaggaacccaggaaggccaaggaaccgaagaaggccaaggagccc
aaggagctgaagcagaaagacggaagtaagaaggcacggaagcctcgggaggcctccggt
accaaggaggccaaagaaaagaggagctgctcagactcggcaaccaggacaaagtctaag
aaggccagcaaggagcaaggaccaaccccagtggagagaaagaagaaaggaaaaaggaaa
agtgaaaccacattggagagtttagagctggatcagggcctgcggaacccgtccctgcgg
agtcctgaggagtccactgagtctgcagacagccagaagcgacgctcaggccggcaggtg
aagcgcagaaaatacaacgaggacctagacttcaaagtggtggatgatgatggggaaaca
atcgcagttcttggagctggccgaacatctgcgctctcagcttctacactggcgtggcag
gctgaggagcctccagaagatgatgcaaacatcattgagaagatcttggcatctaagacc
gtccaggaggttcaccctggagagcctccatttgacctagaactattctacgttaagtat
agaaatttttcctacttacattgtaaatgggccacaatggaagagctggaaaaggatcct
cgcatcgcacagaagatcaagcgatttaggaataaacaagcccagatgaagcacattttt
acagagcctgacgaagacttgttcaatccagattatgtggaagttgatcgcatcctggag
gtggcacacaccaaagatgcagaaacaggggaggaagtaacacattacctggtgaagtgg
tgctccctgccatatgaggagagcacctgggagctagaggaagatgtggatcctgcaaaa
gttaaagaatttgaatctcttcaagttctccctgaaattaagcatgtggaacggcctgct
tcagactcctggcagaagctggagaagtctcgggaatacaagaacagtaaccagctccgg
gaatatcagctagagggaatgaactggcttctttttaattggtataacaggaaaaactgt
attttggcagatgagatgggcctagggaaaaccatccagtccatcacgttcctttcagaa
atattcctcaggggaatccatggcccttttctcatcattgcccctctctcaaccatcact
aactgggagcgggaattccggacatggacagagatgaatgccatcgtgtaccacggcagt
cagatcagcaggcagatgatccagcagtatgaaatggtgtaccgagatgcacagggaaat
cccctttcaggagtcttcaagttccatgtcgtcatcacaacgtttgagatgatcctggca
gattgcccagaactgaagaagattcactggagctgtgtgatcattgatgaggctcacagg
ttgaagaataggaactgcaaacttctggagggactaaagctcatggccctggaacataaa
gtgctgctcaccggaacacccttgcagaactctgtggaagaactctttagtttgctgaat
tttctggagccatcacagtttccttcagagactgcttttttggaggagtttggagatctg
aaaacagaagaacaggtaaagaaactgcaatctatcctaaaaccaatgatgcttcggcgc
cttaaagatgatgtggaaaagaacctggctcccaaacaagagacaatcattgaagtggaa
ctgaccaatattcagaaaaagtactaccgtgccatcctggagaaaaacttttccttcctg
acgaagggagcaaatcagcataacatgcccaacctcatcaataccatgatggagctgaga
aagtgctgcaaccatccctatctgatcaatggggcagaggaaaaaattctagaagatttc
cgaaaaacccacagccctgatgcctctgactttcagctgcaggccatgatccaggcagca
gggaagctggtgctgatagacaaactgctccctaagctgatcgcaggcggccacaaagtg
ctcatcttctcccaaatggtgcgctgccttgacatcctggaagattacctcatccagagg
agatacacctatgagcgaattgatgggcgagtacggggaaacctgcggcaggctgccatc
gaccggttctgtaagccagattcagaccgctttgtctttcttctgtgtaccagagcagga
ggcctggggatcaatctcacggctgctgatacctgcatcatatttgattctgactggaac
ccacaaaatgacttgcaggcccaggcccgatgtcaccgcataggccagagcaaagccgtg
aaggtctatcgcctcatcacccggaactcctacgagcgagaaatgtttgacaaggccagc
ctgaagctgggcctagacaaggccgttcttcaggacatcaatcgaaagggcagcaccaat
ggagtacaacagctctcaaaaatggaagtggaggacttactccggaaaggtgcttatgga
gccttgatggacgaggaagacgaaggctcgaagttctgcgaagaagacatagatcagatt
ctgcagagaagaactcacaccatcaccatccagtctgaggggaaagggtccacttttgcc
aaggctagctttgtggcttcaggaaacagaacagatatttccttggatgatcctaacttt
tggcagaaatgggctaaaatagctgaattagacactgaagcaaagaatgagaaggaaagc
ttagtgatcgaccgacctcgcgtgagaaaacagaccaaacactacaactcatttgaagag
gatgagctcatggaattctcagagttggacagtgactcggatgaaaggcccacacgatcc
aggcgcctcaatgataaagccaggcgctacctccgagccgagtgcttccgggtggagaaa
aacctgctcatcttcggctggggccggtggaaggacatcctgactcatgggcgattcaag
tggcacctgaatgagaaggacatggagatgatttgccgggccctgctagtgtattgtgtc
aagcattataagggggatgagaaaatcaagagtttcatttgggagctgatcaccccttcc
aaagatgggcaggcccagaccctccagaaccactcagggttgtctgccccagttcccaga
gggaggaaaggaaagaagacaaaaaaccaactactgctcccagaactaaagaatgcggac
tggctagccacctgtaaccctgaggtggtcttgcatgatgatggctacaagaaacatctc
aaacagcactgcaacaaggtcctcttgcgagtccggatgctgtactacctaaaagccgaa
atactgggagaagcagctgataaagcatttgagggaactcctgccagggagctggatgta
cctctacccgacatagactatgtggagatcccagtggattggtgggatgctgaggccgat
aagtcccttctcattggtgtgttcaagcatggttacgagaggtacaatgccatgcgagca
gacccagcactctgcttcctggacaaagttgggatgccagatgagaagtctctttctgcc
gagcaaggtgttacggacggaacctcagacattcctgaaagaggcagccccgataaagaa
gacaatgccgaggacaagttagatggcctccagaagcaaacggagagtcctggtgatggc
ggtggtgatgccatttttggtgaaaaaaaggatgacagccgggcagcccaggatggctct
gacccagacaaatcaccgtggccagtctcatctgctcttacggctcgtctccggcgtctg
gtcactatttaccagcgttgcaaccgcaaggaaatctgccgacctgaaatgctgggacca
ggtaaccaaggatactgggttcaagaggagatgttcaggagaacatcagaaatggatctt
atcggcaaagaagcccagaagaggtggaccaggagagagcaagcagacttctatagaaca
gtgtcttcctttggagtcatttatgatcaagaaaagaaaatcttcgactggacacagttt
cgcatcatttcccgtttagacaagaagtccgatgagagcctggaacattatttctatagt
ttcgtggccatgtgccggaatgtgtgtcgtctgccagcatggaaagaggatggcattccc
gatgctaccatctatgttgaacccatcactgaggagcgggctgcaaaaactctgtaccgc
atcgagctgttgcggaaggtccgagagcaggtgctcaggtgtccgcagctgcatgagcgc
ctgcagctctgcaggcccagcctctacctcccagtctggtgggagtgtgggaaacatgat
cgagacctgctcattggcactgccaaacacgggctcaaccgcactgactattacatcatg
aacgacccccagctgtccttcctggatgcttacaggaactatgcccagcataaaaggact
gacacccaggcaccaggaagtctctgttgcctttaccagaacaactccaaactatacgag
tctcttacctatactcaaatgagtagaacttcagagtcccttgaaagtgagcctgagagc
gtggtgaaaatagaaagcagagatgatcatcttggtctccccgggggtagcttacctcgt
gcgacctgtgaaaacttcctttctaacgctcaagatgtcgtttctgtcaaccatgatgaa
agtctgctgccggaatccttggagaaaatgttgtatggtaagaaaggactcagccgggat
ccaggctcctttcaggagagcccaggtaccaacaccgaatctaggaaagatgccattacc
atctctaccaacagagatgggagctgccaacggggcagccatgaggcagaagtagattca
agctcctctctcatggagagcttggaagcaggagtggctcaaatgaacattaaaaatgga
aagcatttgttgatctctctttcaaaagatggggagccatgctgtagtgaggcagggccg
agacctgacagtgttgggcagctggaggacaaaggctcagcttcccctgctgtggatgca
gaaagtgaaagcgggttcgtagagctgtgcagccttagcgtctgtgactccaaaagaaac
ttctcatctgaccagcagttaattgatttactagaaagcaaaagtttagaaagtaaattg
attttgagtcagaaccagagtgatgaggaagaggacgaggaagaaaatgaggaggaaaac
ttagcggtgataacccgcaccagagaaaggccggatgttttgcgcctccccaagcccacg
cctgtcctcccaaggggcaagagccgagccttccatctggatgaaggcaagaaaggaagc
ctagaggtggtaagccagactcctggaccacagaggaccttccctcccatgacctgtcag
tgccactgcaaacacatggagagctgggcccggggcctcgggagtgaggaattcgaagtg
gagaaacccaaggcttataacccagagttgttcagaagcagagccaacagtgccacagtg
gaacgtgagcccactgctattccatcagagccatttaaagtgaagctcttcaaagacccg
tggaaagagaatacagagggaaagaaaggcttccccacatacacttccgaggggagtgaa
cccaaatcagaagacatggattttgaaaataaagatgattatgatagagatggaacatgc
cctagtcaagactatcccgggaaatactctgaagaggagagcaagagctcaacctcgggc
attgcagaccttggagacgacacacaggaagctcgggctcccactatcgcccagctgctc
caggagaaaacactctattccttctcagagtggccaaaggaccgggtgataattaaccgc
ctagataatatctgccacgtggtgttgaaggggaagtggccctcctgccagccgtatgag
ccctcgggcacacctcccacccccatcttagccagtaatgctggttctggaaacagcttc
tcagagccagaagcggcggagcacagcttcagcaatggggcagtgttggcagcccagctc
cagcaggagagctttgtagctccagtattcacaaaagaggaacagaagcacagacgtccc
tatgagtttgaggtggaaagggattccaaggctcggagcctagaacagttctctgtcacc
catgggcaccctcccatcgtccttaatggctggcatggggaatcagccatagacctctcc
tgctcatcagaggggtccccgggagccacatcccctttcccagtgagcgccagcaccccc
aagattggagctatcagttcacttcaaggaaccctcggcatggacttgtctgggattcta
caagctggcctgatccatccagtgacgggacagatagtcaatgggagcctaaggagagac
gatgcggccacgaggaggcggagagggaggcggaaacctgtggaaggagggatggacctc
atctttctgaaggagcaaacactccaggcaggaatcttggaagtccatgaagacccagga
cagaccaccctgagcaccacacaccctgaagggccaggacctgccagctcagcccctgag
cctacaggaacagccaacagccaggctgagaaagccattcccagcaagagcctgctcgac
tggctgcggcagcaggcggactactctttggacattcctggatttggagcaagtttttca
gataaaccaaagcagaggagaccacgctgtaaagaacctggaaaattagatgtcagctct
ctgagcggagaagagagggttcctgctgtccccaaggagccaggactgagggggtttctc
ccagaaaacaagttcaaccacaccttggctgagccggttctccgagacgcgggctcacgc
aggagaggcaggcggccacggacggacctcctgaaagggcccgccgtcgtggcagactct
ccctcgggaatggggccgctgttcatgaacgggctgatcgcgggcatggacctggtgggg
ttgcagaacgtgagaaacatgccaggcatccccctcaccgggctggtgggcttcccagcc
ggctttgccaccatgcccacaggggaagaggtcaagaacaccctgagcatgctgcccatg
atgctgccgggcgtggccgcggtgccccagatgtttggtgtcgggggacttctcaacaca
cccatggccaccacctgcacctccaccgcgccagcgtctctctcaagcacagcaaaaagt
ggctcggcggccactgagaagacagtggaggacaagccaagcagccgcgacgtgaaaaca
gactcactagcggaagacaagccaggccctagcccgttttctgaccagtccgaacctgca
ataactactagtaatcctgtggcttttaacccctttctcatcccgggagtgtctcctgga
ctcctctacccatccatgtttctgtcccccggcatgggcatggccctgcccgccatgcag
caggccagacactcagaaatagcaggtctggagaaccagaagaggaagaagaagaagacg
aagggagacactcccaaccccaacccagagcccgctcctgggtgcgagagggagccaggt
agtgaccagaactgcaccgaggccagtgcccttttgcccccagagagagaacatgtggcc
caggctggggaaggggtgctcaaagactccagcgccaccaccaactag
DBGET
integrated database retrieval system
