Perognathus longimembris pacificus (Pacific pocket mouse): 125353763
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Entry
125353763 CDS
T08928
Symbol
Ctcfl
Name
(RefSeq) transcriptional repressor CTCFL
KO
K23195
transcriptional repressor CTCF
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
plop03000
]
125353763 (Ctcfl)
03036 Chromosome and associated proteins [BR:
plop03036
]
125353763 (Ctcfl)
Transcription factors [BR:
plop03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
125353763 (Ctcfl)
Chromosome and associated proteins [BR:
plop03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
125353763 (Ctcfl)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-H2C2_5
zf-C2H2_jaz
zf-Di19
Motif
Other DBs
NCBI-GeneID:
125353763
NCBI-ProteinID:
XP_048205376
LinkDB
All DBs
Position
6:complement(82577992..82584943)
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AA seq
524 aa
AA seq
DB search
MAASKAGVPPAPSARLRPRQAAPEQAGVQAGRRGGGRPENTRAAAPHADLERPAADGDEQ
LVLPLQAVPLAAPDVELRGPGWLGVLVPEGPGAEAALLWLEPPAPGAPQCPALGAQEPLC
PPGGLEVVQLYLLEGTPAVVLGADAPAESAGLTEFEKAQVQQPEGELADSAQEQFFLLQV
RPAAEEETILTISNLKVKTQPEEPTAAQANVEKPTARNTERKTTDPGSAFRCGVCPFAAS
RASGLNRHAKTHASRHAHLCHLCHKPFRTATLLRSHVNTRTRTKPHRCTECSVAFVTRGE
LARHRRYRHTHGKPFRCSLCAYASVEASKLTRHVRSHTGERPFPCRACSYASKDACKLKR
HTRTPSGEKPYECLVCRARFTQSGTMKTHVARKHSESAPKHQCPRCAALIARKSDLRDPR
RAPPGVHLRKLHGLSALALRCRHRPAAFHERHALLRHQRGRARATGRSPAGRPCRDACLH
PEVFTAQSPRSSPCPATQTRATEEVVWSVQLQPQTVGNHGRVGV
NT seq
1575 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgtccaaggccggggtcccgccggcgccgtccgcccgcctccgcccgcgccag
gccgcgccggagcaggccggggtgcaggccgggcggaggggcggggggcgcccggagaac
acccgggccgcggccccgcacgcggacctggagcggcccgcggcggacggggacgagcag
ctcgtcctgcccctgcaggccgtgcccctggcggcccccgacgtggagctgcggggcccg
ggctggctcggagtgctggtcccggaggggccgggcgccgaggccgcgctgctgtggctg
gagccgccggcgcccggcgcgccccagtgcccggccctgggtgctcaggagccgctgtgc
ccgccgggcggcctggaggtggtgcagctctacctgctggaggggaccccggccgtggtc
ctgggcgcggacgccccggcggaaagcgcggggctcacggagtttgagaaagcccaggtc
cagcaacctgaaggagaattggcagacagcgcccaggagcagttcttcctcttgcaagtg
aggccggcggctgaagaagaaacgattctgaccatttccaacttaaaagtcaaaacacag
cccgaggaaccgaccgctgcgcaagcaaacgtggaaaagcctacagccaggaacacggag
aggaagacaacggacccggggagcgccttccgctgcggggtctgcccgttcgccgcctcc
cgagcctccggcctgaaccgccacgcgaagacgcacgcgagccgccacgcccacctgtgc
cacctgtgccacaagcccttccggacggccacgctcctgcgcagccacgtcaacacgcgc
acacgcaccaagccgcacaggtgcacggagtgcagcgtggcgttcgtcacacgtggggag
ctggcgcggcaccggcgctacagacacacccacgggaagccgttccgctgctcgctgtgc
gcctacgccagcgtggaggccagcaagctgacccgccacgtccgctcccacacgggcgag
cgccccttcccgtgccgcgcgtgcagctacgccagcaaggacgcgtgcaagctcaagcgc
cacacgcgcacgccctcgggagagaagccctacgagtgcctggtctgccgcgcccggttc
acccagagcggcaccatgaagacgcacgtggcccggaagcacagcgagagcgcccccaaa
caccagtgcccccgctgcgccgccctcatcgccaggaagagcgacctgcgtgaccctcgg
cgtgcccctcccggcgtccacctgcgcaagctgcacggcctcagcgcgctggcgctcagg
tgccgccaccgcccggccgccttccacgagcgccacgccctcctgcggcaccagaggggc
cgcgcgcgcgcgaccggccgctcccccgccggcaggccgtgtcgtgacgcgtgtctgcat
ccggaagtcttcaccgctcagagcccccgttcttccccatgcccggccacgcagacacga
gccacggaggaggtggtgtggtcagtgcagcttcagcctcagaccgtaggaaaccacggg
cgagtcggggtgtga
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