Perognathus longimembris pacificus (Pacific pocket mouse): 125353874
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Entry
125353874 CDS
T08928
Symbol
Epyc
Name
(RefSeq) epiphycan
KO
K08127
epiphycan
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
plop00535
]
125353874 (Epyc)
Proteoglycans [BR:
plop00535
]
Extracellular matrix (ECM) proteoglycans
Small leucine-rich proteoglycan (SLRP) family
class III
125353874 (Epyc)
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Motif
Pfam:
LRR_8
LRR_4
LRR_5
LRRNT
LRR_9
Motif
Other DBs
NCBI-GeneID:
125353874
NCBI-ProteinID:
XP_048205559
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All DBs
Position
1:22272692..22293491
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AA seq
322 aa
AA seq
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MKILARLILGLVIFDAAVTAPTPESINYDSESYDATLEDLDDFYNYENIPINQAKIERGT
VMPSGNRELLRLGPEMGEIQEEEDDEESTPRMIDGSFPQEPEFTGVLGPHTNEDFPTCLL
CTCISTTVYCDDHELDSIPPLPKNTAYFYSRFNRIQKIDRNDFASLNNLKRIDLTSNLIS
EIDEDAFRKLPQLRELVLRDNHIRQLPELPTTLTFIDISNNRLGRKGIKQEAFKDMYELH
HLYLTDNNLDHIPLPLPENLRALHLQNNNILEMHEDTFCNTKNVTYIRKALEDIRLDGNP
INLSKTPQAYICLPRLPIGSLI
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atgaagatattagcaagacttattctaggacttgtcatctttgatgctgctgtgacagcc
cccactccagagtccatcaactatgattcagaatcctatgacgccactctagaagaccta
gatgacttctacaattatgaaaacatacctattaatcaagcaaagattgaaagagggacg
gtgatgccatctgggaacagagagctcctccgtctaggcccagagatgggggagatccag
gaggaggaagatgatgaggaatccacccccaggatgatcgatggctctttcccacaggag
ccagaattcacaggggttctaggcccacacaccaatgaagactttcccacctgtctccta
tgtacttgcataagcaccacagtgtattgcgatgatcatgaactggattccatccctcca
ttgcccaagaacacggcttacttctactcccgctttaacagaatccaaaagatcgacagg
aatgactttgcaagcctgaacaatttaaaaaggattgatttgacttccaatttaatatct
gagattgatgaagatgcattccgaaagctgcctcaacttcgagagcttgtcctgcgggat
aaccatataagacagctcccagaattgccaaccactttgacatttattgatattagtaac
aatagacttggaaggaaagggattaagcaggaagcatttaaagacatgtatgaactccac
catctctatctgacggataacaacttggaccacattcctctgccactcccagaaaaccta
cgcgccctgcacctccagaataacaacattttggagatgcatgaagataccttttgtaat
actaaaaatgtaacttatattcgtaaggcattagaggacattcgattggatggaaaccct
atcaatctcagcaaaacgccacaagcatatatatgcctacctcgtctgcctatcgggagt
cttatataa
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