Perognathus longimembris pacificus (Pacific pocket mouse): 125353911
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Entry
125353911 CDS
T08928
Symbol
Rae1
Name
(RefSeq) mRNA export factor RAE1
KO
K14298
mRNA export factor
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop03013
Nucleocytoplasmic transport
plop05014
Amyotrophic lateral sclerosis
plop05164
Influenza A
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
125353911 (Rae1)
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
125353911 (Rae1)
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
125353911 (Rae1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
plop03019
]
125353911 (Rae1)
03036 Chromosome and associated proteins [BR:
plop03036
]
125353911 (Rae1)
Messenger RNA biogenesis [BR:
plop03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
125353911 (Rae1)
Chromosome and associated proteins [BR:
plop03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
125353911 (Rae1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_EML_2
WDR55
WD40
WD40_CDC20-Fz
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_EML
Beta-prop_TEP1_C
Beta-prop_RIG_2nd
Beta-prop_WDR90_POC16_2nd
WD40_RFWD3
ANAPC4_WD40
Beta-prop_IFT140_1st
WD40_MABP1-WDR62_2nd
WDR90_beta-prop_4th
NBCH_WD40
Beta-prop_SPT8
Motif
Other DBs
NCBI-GeneID:
125353911
NCBI-ProteinID:
XP_048205610
LinkDB
All DBs
Position
6:82524078..82538004
Genome browser
AA seq
368 aa
AA seq
DB search
MSLFGTTSGFGTGGTSMFGSATTDNHNPMKDIEVTSSPDDSIGCLSFSPPTLPGNFLIAG
SWANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVFTASCDKAAKMWDLNSNQA
IQIAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPMMVLQLPERCYCADVIY
PMAVVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRV
AIHYINPPNPAKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFW
DKDARTKLKTSEQLDQPISACCFNHNGNIFAYASSYDWSKGHEFYNPQKKNYIFLRNAAE
ELKPRNKK
NT seq
1107 nt
NT seq
+upstream
nt +downstream
nt
atgagtctgtttggcaccacctcagggtttgggactggcgggaccagcatgtttggcagc
gcaaccacagataaccacaatcccatgaaggacattgaggtgacgtcttctccagacgat
agcatcgggtgtctgtccttcagccctcccaccttgccggggaacttcctcattgcaggc
tcctgggccaacgatgttcgctgctgggaggttcaggacagcgggcagaccattccaaaa
gcgcagcagatgcacacggggcccgtgctcgacgtctgctggagcgacgatgggagcaaa
gtattcacagcatcatgtgacaaagcagccaagatgtgggacctcaacagtaaccaggcc
attcaaatcgctcagcacgatgcacctgttaagactattcattggattaaagccccaaac
tacagctgtgtgatgactggaagctgggacaagaccttaaagttttgggatacccgctcg
tccaaccctatgatggtcttgcagctccccgaaaggtgctactgcgccgacgtgatatat
ccaatggccgtggtggccactgcagagcggggcctgattgtctaccagctggaaaaccag
ccttctgagttcaggaggatagagtctcctctcaaacaccagcatcgctgtgtggctatt
tttaaagacaaacagaataagccgactgggtttgccctgggaagtatcgaggggagagtg
gccattcactacatcaaccccccaaacccggccaaagataacttcaccttcaaatgccat
cgctccaatggaaccaacacctctgctcctcaggacatctatgcggtgaacggcatcgcc
ttccatcctgtccacggcactctggctaccgtggggtccgacggtcggttcagcttctgg
gacaaggacgcccggacaaaactgaagacctcagagcagctggaccagcccatctcggcg
tgctgcttcaaccacaacggcaacatatttgcttacgcttccagctacgactggtccaag
ggacacgagttctataacccccagaagaaaaactacattttcttgcggaatgctgctgaa
gagctaaagccaaggaataagaagtag
DBGET
integrated database retrieval system
