Perognathus longimembris pacificus (Pacific pocket mouse): 125353925
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Entry
125353925 CDS
T08928
Symbol
Cdh4
Name
(RefSeq) LOW QUALITY PROTEIN: cadherin-4
KO
K06797
cadherin 4, type 1, R-cadherin
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop04514
Cell adhesion molecule (CAM) interaction
plop04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
125353925 (Cdh4)
04519 Cadherin signaling
125353925 (Cdh4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
plop04515
]
125353925 (Cdh4)
Cell adhesion molecules [BR:
plop04515
]
Cadherins
Major cadherins
125353925 (Cdh4)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_pro
CADH_Y-type_LIR
Cadherin_FAT4_N
Ig_CLSTN
F59B103_C
NCMAP
Stevor
Motif
Other DBs
NCBI-GeneID:
125353925
NCBI-ProteinID:
XP_048205637
LinkDB
All DBs
Position
6:84737847..85094526
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AA seq
915 aa
AA seq
DB search
MTAGAGVLLLLLLALSRARRAHGGGLTARETCKAGFSEEDYTALISPNVLEGEKLLKVEF
SSCLGTKGTQYETDSLDFKVGTDGTVFAARELQIPSEQVAFTVTARDHQTAEQWDALVRL
LVAQSASPHAGHEKGAASVVLAPSRPPQDTLLPWSPPQSSRGLRRQKRDWVIPPINVPEN
SRGPFPQQLVRIRSDKDNDIPIRYSITGVGADQPPMEVFSIDSMSGRMYVTRPMDREERA
SYHLRAHAVDMNGNKVENPIDLYIYVIDMNDNRPDFLNQVYNGSVDEGSKPGTYVMTVTA
NDADDATTANGMVRYRIVTQTPQSPSQNMFTINSETGDIVTVAAGLDREKVQQYTVIVQA
TDMEGNLNYGLSNTATAVISVTDVNDNPPEFTVSTFSGEVPENRVETVVANLTVMDRDQP
HSPNWNAVYRIISGDPSGHFSVRTDPVTNEGLVTVVKSVDYELNRAFMLTVMVSNQAPLA
SGIQMSFQSTAGVTISVTDINEAPYFPSNHKLIRLEEGVPAGTALTTFSAVDPDRFMQQA
VRYSKLADPASWLHINSSNGQITTAAVLDRESLYTKHNVYEATFLAADNGIPPASGTGTL
QIYLIDINDNAPELLPKEAQICEKPGLNAINITAADADMDPNIGPYVFELPFVPGAVRKN
WTIARLNGDYAQLGLRVPYLEAGVYDVPVIVTDSGNPPLSNTSVIKVKVCPCDENGDCTT
VGAVAAAGLGTGAIVAILICMVILLTMVLLFVVWMKRREKERHTKQLLIDPEDDVRDNIL
KYDEEGGGEEDQDYDLSQLQQPEAMEHVLSKAPGVRRVDERPVGAEPQYPVRPVVPHPGD
IGDFINEGLRAADNDPTAPPYDSLLVFDYEGSGSTAGSVSSLNSSSSGDQDYDYLNDWGP
RFKKLADMYGGGEED
NT seq
2748 nt
NT seq
+upstream
nt +downstream
nt
atgaccgcgggcgccggcgtgctgctcctgctgctgctcgcgctctcccgcgcgcgccgg
gcccacggtgggggtcttacagccagagagacttgcaaggctggcttctcggaggaagac
tacactgctttgatctcgcccaatgtgctggaaggagagaagctactcaaagttgagttc
agcagctgtttggggaccaaggggacgcagtatgagaccgacagcctggacttcaaagtg
gggacggacgggacggtcttcgccgcgcgcgagctgcagatcccgtcggagcaggtggcg
ttcacggtgacggcgcgggaccaccagacggcggagcagtgggacgccctggtgcggctg
ctggtggcgcagtccgcgtccccgcacgcgggacacgagaaaggcgcggcgagcgtggtt
ctggccccctcccggcccccgcaggacacgctgctgccctggtccccgccccagagctcc
cggggcctccggaggcagaagcgggactgggtcatcccccccatcaacgtgccggaaaac
tctcgaggccccttcccgcagcagctcgtgcggatccggtccgacaaagacaacgacatc
cccatccggtacagcatcacgggcgtgggcgccgaccagccccccatggaggtgttcagc
attgactccatgtccggccggatgtacgtcaccaggcccatggaccgggaggagcgcgcc
tcctaccacctgcgagcccacgcggtggacatgaacggcaacaaggtggagaaccccatc
gacctgtacatctacgtcatcgacatgaacgacaaccgccccgacttcctcaaccaggtc
tacaacggctccgtggacgagggctccaagccaggcacgtacgtgatgaccgtcaccgcc
aacgacgctgacgacgccaccacggccaacgggatggtgcgctatcggatcgtgacccag
acgccgcagagcccatcccagaacatgttcaccatcaacagcgagaccggggacatcgtg
acggtggcggctggcctggatcgtgagaaggtccagcagtacaccgtgatcgtccaggcc
acggacatggaggggaatctcaactacggcctctccaacacagccaccgccgtcatctcg
gtgacggacgtgaacgacaacccgcccgagttcaccgtcagcacgttttcaggagaagtc
ccggaaaaccgggtggagacggtggttgccaacctcaccgtgatggaccgcgaccagcct
cactcgcccaactggaacgccgtgtaccgcatcatcagcggggacccctcggggcacttc
agcgtgcgcaccgaccccgtcaccaacgagggcctggtcaccgtggtgaagtctgtggac
tacgagctgaaccgcgccttcatgctgaccgtgatggtgtccaatcaggcgcccctggcc
agtgggatccagatgtccttccagtccaccgcaggggtgaccatctccgtcacagacatc
aacgaggcgccctacttcccctccaaccacaagctgatccgcctggaggagggcgtgccc
gcgggcaccgcgctcaccaccttctcggccgtggaccccgaccgcttcatgcagcaagcc
gtgaggtactcgaagctggccgacccggcgagctggctgcacattaactccagcaacggg
cagatcaccacggcggcggtgctggaccgcgagtccctctacaccaagcacaacgtctac
gaggccaccttcctggccgccgacaacggcatccccccggccagcggcaccgggaccctg
cagatctacctcatcgacatcaacgacaacgcccctgaactgctgcccaaggaggcgcag
atctgcgagaagccgggcctcaacgccatcaacatcaccgcggccgacgccgacatggac
cccaacatcggcccctacgtctttgagctgcccttcgtcccgggggcggtgcggaagaac
tggaccatcgcccgcctaaatggcgactacgcccagctcggcctgcgcgtcccgtacctg
gaggccggggtgtacgacgtccccgtcatcgtcaccgactccgggaacccgcccctgtcc
aacacgtccgtcatcaaggtcaaggtctgcccttgcgacgagaacggagactgcaccacg
gtgggggcggtggccgcggccggcctgggcacgggcgccatcgtcgccatcctcatctgc
atggtcatcctgctgaccatggtcctgctgttcgtggtgtggatgaagcgccgggagaag
gagcggcacacgaagcagctgctcatcgaccccgaggacgacgtgcgcgacaacatcctc
aagtacgacgaggagggcggcggcgaggaggaccaggactacgacctcagccagctgcag
cagccggaagcaatggagcacgtgctgagcaaggcccccggcgtccggcgtgtggatgag
cggccggtgggggccgagccccagtacccagtcaggcctgtggtgccccatcccggggac
atcggtgacttcatcaatgagggactccgggccgccgacaacgaccccacggccccccct
tacgactccctgttggtcttcgactacgaggggagcggctccaccgcgggctccgtgagc
tccctgaactcgtcgagctccggagaccaggactacgactacctgaacgactgggggccg
cggttcaagaagctggcggacatgtacggaggcggcgaagaggactag
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