Perognathus longimembris pacificus (Pacific pocket mouse): 125354215
Help
Entry
125354215 CDS
T08928
Symbol
Chd5
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 5
KO
K14435
chromodomain-helicase-DNA-binding protein 5 [EC:5.6.2.-]
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
plop03036
]
125354215 (Chd5)
Chromosome and associated proteins [BR:
plop03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
125354215 (Chd5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
CHDCT2
CHDII_SANT-like
Helicase_C
CHDNT
PHD
DUF1087
Chromo
PHD-1st_NSD
ResIII
HDA2-3
PHDvar_NSD
HTH_Hrp3
DEAD
PHD_2
AAA_22
Motif
Other DBs
NCBI-GeneID:
125354215
NCBI-ProteinID:
XP_048205768
LinkDB
All DBs
Position
7:complement(3490836..3540600)
Genome browser
AA seq
1957 aa
AA seq
DB search
MRGPLGTEEELPRLFAEEMENEDEMSEEEDGGLDAFEDFFPMEPVSLPKKKKPRKLKESK
SKGKRKKKEGSNDELSENEEDLEEKSESEGSDYSPNKKRKKKLKEKKEKKTKRKKKDEDE
DDNDDGCLKEPKSSGQLMAEWGLDNVDYLFSEEDYHTLTNYKAFSQFLRPLIAKKNPKIP
MSKMMTVLGAKWREFSANNPFKGSSAAAAAAAVAAAVETVTIAPPLAISPQQGPQTMPIR
KAKTKEGKGPGVRKKIKSSKDGKKKGKGKKVAGLKFRFGGISNKRKKGSSSEEDEREESD
LDSASIHSSSVRSECSAALGKKSKRRRKKKRIDDGDGYETDHQDYCEVCQQGGEIILCDT
CPRAYHLVCLDPELEKAPEGKWSCPHCEKEGIQWEPKDEDEEEEEGGCEEEEDDHMEFCR
VCKDGGELLCCDACPSSYHLHCLNPPLPEIPNGEWLCPRCTCPPLKGKVQRILHWRWTEP
PAPFVVGLPGPEVESEVPPPKALEGIPEREFFVKWAGLSYWHCSWVKELQLELYHTVMYR
NYQRKNDMDEPPPFDYGSGDEDGKSEKRKSKDPLYAKMEERFYRYGIKPEWMVIHRILNH
SFDKKGEVHYLIKWKDLSYDQCTWEIDDIDIPYYDNLKQAYWGHRELMLGEDARLPKQLL
KKGKKWKDGKQEKPPPDTPIVDPTVKFDKQPWYMDSTGGTLHPYQLEGLNWLRFSWAQGT
DTILADEMGLGKTVQTIVFLYSLYKEGHSKGPYLVSAPLSTIINWEREFEMWAPEFYVVT
YTGDKESRSVIRENEFSFEDNAIRSGKKVFRMKKEVQIKFHVVLTSYELITIDQAVLGSI
EWACLVVDEAHRLKNNQSKFFRVLNSYKIDYKLLLTGTPLQNNLEELFHLLNFLTPERFN
NLEGFLEEFADISKEDQIKKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSQMQKKY
YKFILTRNFEALNSKGGGNQVSLLNIMMDLKKCCNHPYLFPVAAVEAPVLPNGSYDGSSL
VKSSGKLMLLQKMLKKLRDEGHRVLIFSQMTKMLDLLEDFLEYEGYKYERIDGGITGGLR
QEAIDRFNAPGAQQFCFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQ
NKKVMIYRFVTRASVEERITQVAKRKMMLTHLVVRPGLGSKSGSMTKQELDDILKFGTEE
LFKDDVEGMMSQGQRPITPIPDVQSSKGGALAASAKKKHGSTPPGDNKDVEDSSVIHYDD
AAISKLLDRNQDATEDTELQNMNEYLSSFKVAQYVVREEDGVEEVEREVIKQEENVDPDY
WEKLLRHHYEQQQEDLARNLGKGKRIRKQVNYNDASQEDQEWQDELSDNQSEYSIGSEDE
DEDFEERPEGQSGRRQSRRQLKSDRDKPLPPLLARVGGNIEVLGFNARQRKAFLNAIMRW
GMPPQDAFNSQWLVRDLRGKSEKEFRAYVSLFMRHLCEPGADGAETFADGVPREGLSRQH
VLTRIGVMSLVRKKVQEFEHVNGKYSTPDLLPEGPENKKLPGEVISDPNTPVPASPAHLP
PAPLGLPDKMEAQMGYLDEKEQGLQKPEKPLDAQAPPTALDRAEVEDKQESADRDSQDRG
REERPEELEKAQPSPEQLLRDDVPPEKEKVLDKLELSLSHSRGDGGDFRPDDPKAEEKEP
SETQQNGDREEEEEGKKEDKSGRFKFMFNIADGGFTELHTLWQNEERAAVSSGKIYDIWH
RRHDYWLLAGIVTHGYARWQDIQNDPRYMILNEPFKSEVHKGNYLEMKNKFLARRFKLLE
QALVIEEQLRRAAYLNMTQDPNHPAMALNARLAEVECLAESHQHLSKESLAGNKPANAVL
HKVLNQLEELLSDMKADVTRLPSMLSRIPPVAARLQMSERSILSRLTNRAGDPTLQQGAF
GSSQMYNNSFGPNFRGPGPGGIVNYNQMPLGPYVTDI
NT seq
5874 nt
NT seq
+upstream
nt +downstream
nt
atgcggggcccgctgggcaccgaggaggagctgccgcggctgttcgccgaggagatggag
aacgaggacgagatgtcagaagaagaggatggtggccttgatgcctttgaggatttcttc
cccatggagcctgtgagccttcccaagaagaagaaacccaggaagctcaaggagagcaag
tccaaggggaagcgaaagaaaaaggaggggagtaacgatgagctatcagaaaacgaggag
gatctggaagagaagtcggagagtgaaggtagcgactactccccgaacaaaaagaggaag
aagaaactgaaggagaagaaggagaaaaaaaccaaacgtaagaagaaggatgaagacgaa
gatgacaatgatgacggatgcttaaaggagcccaagtcctcagggcagctcatggcggag
tggggcctggacaacgtagactacctgttctctgaggaggactaccacacgctgaccaac
tacaaggccttcagccagttcctccggccactcatagccaagaagaacccaaagatcccc
atgtccaaaatgatgactgtcctgggtgccaaatggcgggaattcagtgccaacaaccct
ttcaagggcagctctgcggctgcggccgcggcggcggtggctgcagcggtagagacagtc
accatcgctcctccgctggccatcagcccccagcaggggccgcagaccatgcccatccgc
aaggccaagaccaaagagggcaagggccctggcgtaaggaagaagattaaaagctccaaa
gatgggaagaagaaggggaaggggaaaaaggtggccgggctcaagttccgctttggagga
atcagcaacaagaggaagaaaggctcctcgagcgaggaggatgagcgagaggagtctgac
ttggacagcgccagcatccacagctcttcggtgcgctcggagtgctccgcagccctgggc
aagaagagcaagaggagacgcaagaagaagaggattgatgacggcgatggctacgagacg
gatcaccaggattactgcgaggtgtgccagcagggaggggagatcatcttgtgtgacacc
tgtcccagggcctaccacctggtctgcctggatccagagctggagaaggctccggagggc
aagtggagctgcccgcactgtgagaaggaggggatccagtgggagccaaaggacgaggac
gaggaggaggaggagggcggctgtgaggaggaggaagatgaccacatggagttctgccgc
gtgtgcaaggacggcggcgagctgctctgctgcgacgcctgcccctcctcctaccacctg
cactgcctcaacccgccactgccagagatcccaaatggtgaatggctctgcccgcgctgt
acttgccccccgctgaagggcaaagtgcagcggatcctccactggcggtggacggagccc
ccggccccgttcgtggtggggctgccaggaccggaggtggagtcggaggtgcccccgccc
aaagccctggagggcatccccgagagggagttcttcgtcaagtgggccggcctctcctac
tggcactgctcctgggtgaaggagctgcagctggagctctaccacacggtgatgtaccgc
aactaccaaagaaagaacgacatggacgagccgccgcccttcgactacggctctggcgat
gaggacggcaagagcgagaagaggaagagcaaggacccgctctacgccaagatggaggag
cgcttctaccgctacggcatcaagccggagtggatggtgatccaccgcatcctgaaccac
agctttgacaagaagggggaggtccactacctcatcaagtggaaggacctgtcctacgac
cagtgcacctgggagatcgacgacatcgacatcccctattacgacaacctgaagcaggcc
tactggggtcacagggagctgatgctgggagaggacgccaggctgcctaagcagctgctc
aagaagggcaagaagtggaaggacgggaaacaggagaagcccccgccggacacgcccatc
gtggaccccacggtgaagttcgacaagcagccgtggtacatggactccaccggcggcacg
ctgcacccctaccagctggagggcctcaactggctgcgcttctcctgggcccagggcacc
gacaccatcctggccgacgagatgggtctgggcaagaccgtgcagaccatcgtgttcctg
tactccttgtacaaggagggccactccaaggggccctacctggtcagcgcgcccctgtcc
accatcatcaactgggagcgagagtttgagatgtgggcgcctgagttctacgtggtcacc
tacacgggggacaaggagagccgctcggtgatccgcgagaacgagttctcctttgaggac
aacgccattcgcagcgggaagaaggtgttccggatgaagaaagaagtgcagatcaagttc
cacgtcgtgctcacctcctacgagctcatcaccatcgaccaggccgtcctgggctccatt
gagtgggcctgcctggtggtggacgaggcccaccgactcaagaataaccagtcgaaattc
ttcagggtcttgaacagctacaagatcgattacaagctgctgctcacggggactccgctt
cagaacaacctggaggaactcttccacctcctcaacttcctgaccccggagaggttcaac
aacctggagggcttcctggaggagtttgcggacatctccaaggaagaccagatcaagaag
ctgcacgacctgctggggccccacatgctgcggcggctcaaggcggacgtgttcaagaac
atgccggccaagacggagctgatcgtccgcgtggagctgagccagatgcagaaaaagtac
tacaagttcatcctcacgcggaacttcgaggcgctgaactccaaggggggcgggaaccag
gtgtcgctgctcaacatcatgatggacctcaagaagtgctgcaaccacccctatctgttc
ccggtggctgcggtggaggctcccgtgctgcccaacggctcctacgacggcagctcgctg
gtcaagtcgtcggggaagctcatgctcctgcagaagatgctcaagaagctgcgggacgag
ggccaccgggtgctcatcttctcccagatgaccaagatgttggatcttctggaggacttc
ctggagtacgagggctacaagtacgagcgcatcgacggtggcatcacgggtggcctgcgg
caggaggccatcgacagattcaatgcccccggagcccagcagttctgcttcctgctttca
acccgggcaggcggcctgggcatcaacctggccacggcggacacggtcatcatctatgac
tcggactggaacccccacaacgacatccaggccttcagccgcgcccaccgcatcgggcag
aacaagaaggtgatgatctaccgcttcgtgacgcgggcctcggtggaggagcgcatcacg
caggtggccaagcgcaagatgatgctcacgcacctggtggtgcggccgggcctgggctcc
aagtcgggctccatgaccaagcaggagctggacgacatcctcaagttcggcacggaggag
ctcttcaaggacgacgtggagggcatgatgtcccagggccagaggcccatcacgcccatc
cctgatgtccagtcctccaaggggggagctctggcggccagtgccaagaagaagcacggg
agcaccccgccaggtgacaacaaggacgtggaggacagcagcgtgatccactatgacgac
gcggccatctccaagctgctggaccgcaaccaggacgccacggaggacacggagctgcag
aacatgaacgagtacctgagctccttcaaggtggcgcagtatgtggttcgagaggaagat
ggcgtggaggaggtggagcgggaggtcatcaagcaggaggagaacgtggaccccgactac
tgggagaagctgctgcggcaccactacgagcagcagcaggaggacctggcgcgcaacctg
ggcaagggcaagcgcatccgcaagcaggtcaactacaacgacgcctcgcaggaggaccag
gagtggcaggacgagctttcggataaccagtctgaatattccattggctccgaggacgag
gacgaggactttgaggagcggccggaagggcagagcgggcggcgacaatcccggagacag
ctgaagagcgaccgggacaagcccctgccacccctgctggctcgcgtaggcggcaacatt
gaggtgctgggcttcaatgcccgccagcggaaagcctttctgaacgccatcatgcgctgg
ggcatgcccccccaggacgccttcaactcccagtggctggtgcgggacctgcgcgggaag
agtgagaaggagtttagagcctacgtgtcgctcttcatgcggcacctgtgtgagccggga
gcggacggcgcggagaccttcgcggacggcgtcccccgggagggcctctcccggcagcac
gtgctcacccgcatcggggtcatgtcactcgttaggaagaaggttcaggagtttgagcac
gtcaacgggaagtacagcaccccagacctgctccccgagggccccgagaacaagaagctg
ccgggggaggtcatctccgaccccaacacgcccgtgcccgccagccccgcccacctcccg
ccagccccgctgggcctgccagacaaaatggaagcccagatgggctatctggatgagaag
gagcaagggctgcagaagccagagaagcccctggacgcccaggccccgcccacagcgctg
gacagagccgaggtggaggacaagcaggagagcgcggacagggacagccaggaccgaggc
cgagaggagcggccggaggagctggagaaggcccagccctccccggagcagctgctgaga
gacgatgtgcctcctgagaaggagaaagttctggacaagctggagctgagcctgagtcac
agcagaggggatggcggcgatttcaggccagatgaccccaaggctgaggagaaggagccc
tctgaaacacagcaaaacggcgacagagaggaagaggaggaggggaagaaggaagataag
agtgggaggttcaaattcatgttcaacattgcagacggaggcttcacagagctgcacacg
ctgtggcagaacgaggagcgggctgccgtgtcctccggaaaaatctacgacatctggcac
cggcgccatgactactggctgctggcgggcatcgtgacgcatggctatgcccgctggcag
gacatccagaatgacccgaggtacatgatcctcaatgagcccttcaagtccgaggtccac
aagggaaactacctggagatgaagaacaagttcctcgcccgcaggttcaagctgctggag
caggcgctggtcatcgaggagcagctccggagggccgcgtacctcaacatgacccaggac
cccaaccacccggccatggccctcaatgcccgcctggctgaggtggagtgccttgctgag
agtcaccagcacctgtccaaggagtccctcgctgggaacaagcctgccaatgccgtcctg
cacaaggtcttgaaccagctggaggagctgctgagcgacatgaaggcggacgtgacgcgg
ctgccgtccatgctgtcccggatccccccggtggctgctcgcctgcagatgtcggagcgg
agcatcctcagccgcctgaccaaccgcgccggtgaccccacccttcagcagggcgctttc
ggctcctcccagatgtacaacaacagctttgggcccaacttccggggccctggaccggga
gggattgtcaactacaaccagatgcccctgggtccctatgtgaccgatatctag
DBGET
integrated database retrieval system
