Perognathus longimembris pacificus (Pacific pocket mouse): 125354257
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Entry
125354257 CDS
T08928
Symbol
Matn1
Name
(RefSeq) cartilage matrix protein
KO
K19467
matrilin
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
plop04990
]
125354257 (Matn1)
Domain-containing proteins not elsewhere classified [BR:
plop04990
]
Von Willebrand domain-containing proteins
VWA domain-containing proteins
125354257 (Matn1)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
VWA
VWA_2
Matrilin_ccoil
FXa_inhibition
cEGF
EGF_CA
VWA_CoxE
EGF_LRP2
EGF
hEGF
EGF_3
Plasmod_Pvs28
Motif
Other DBs
NCBI-GeneID:
125354257
NCBI-ProteinID:
XP_048205816
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All DBs
Position
7:complement(18869300..18876368)
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AA seq
499 aa
AA seq
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MTLLSATSLVLCRLLLLLLLAQVPPSLGVSPQPRGHLCRTRPTDLVFVVDSSRSVRPVEF
EKVKVFLSQVIESLTVGPNATRVGVVNYASTVQQEFPLRAHSSKAALLQAVRRIRPLSTG
TMTGLALQFAITRALSDAEGGRARSPDISKVVIVVTDGRPQDSVQDVSARARAGGIELFA
IGVGRVDKATLRQIASEPQDEHVDYVESYSVIEKLSKKFQEAFCVVSDLCATGDHDCEQV
CISSPGSYTCACHEGFTLNSDGKTCNVCSGGGGSSATDLVFLIDGSKSVRPENFELVKRF
INQIVDTLDVSDRLAQVGLVQYSSSVRQEFPLGRFHTKKDIKAAVRNMSYMEKGTMTGAA
LKYLIDNSFTVSSGARPGAQKVGIVFTDGRSQDYINDAARKAKDLGFKMFAVGVGNAVED
ELREIASEPVAEHYFYTADFKTINQIGKKLQKKICVEEDPCACESIVKFQAKVEEMLKAL
TRKLEVVSKRLSILENRIV
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atgacgctcctctctgccaccagcctcgtgctctgcagactgctgctgctgctgctgctg
gcccaggtgccacccagccttggtgtcagcccccagcccagagggcacctatgtcggacg
cggcccacggacctggtgttcgtggtggacagctctcgcagcgtgcggcctgtggagttt
gagaaggtgaaggtgttcctgtcgcaggtcatcgagtcgctcaccgtggggcccaacgcc
acgcgggtgggcgtggtcaactacgcgagcaccgtgcagcaggagttcccgctgcgcgcg
cacagctccaaggccgcgctgctgcaggccgtgcgccgcatccggccgctctccaccggc
accatgaccggcctggccctgcagttcgccatcaccagggccctcagcgacgccgagggc
gggcgcgccaggtcccccgacatcagcaaggtggtcatcgtggtgactgatgggaggccc
caggacagcgtgcaggacgtgtctgcgcgggcccgggctggcggcatcgagctgttcgcc
attggcgtgggccgtgtggacaaggccacgctgcggcagatcgccagcgagccacaggac
gagcacgtggactatgtggagagctacagcgtcattgagaagctgtccaagaagttccag
gaggccttctgcgtggtgtcagacctgtgtgccacaggagaccatgactgtgagcaggtg
tgcatcagctccccaggctcctacacctgtgcctgccatgaaggcttcaccctgaacagt
gatggcaagacatgcaacgtctgcagtggtgggggtggcagctcagctacggacctggtc
ttccttatcgatggatccaagagtgtgcggccagagaactttgagctggtgaagaggttc
atcaaccagattgtggacacgctggacgtgtccgacaggctggcccaggttgggctggtg
cagtactcgagctccgtgcgccaagagttcccgctgggccgcttccacaccaagaaggac
atcaaggctgccgtgaggaacatgtcctacatggagaagggcaccatgactggggctgcc
ctcaagtacctcattgacaattccttcaccgtgtccagtggggccaggcctggggcccag
aaggtgggcatcgtctttaccgatggcaggagccaggactacattaacgatgctgccagg
aaggccaaggatcttggctttaagatgtttgccgtgggcgtgggcaatgccgtggaagat
gagctgagggaaatcgcctcggagcccgtggcagaacactacttctacacagccgacttc
aagaccatcaaccagatcggcaagaagttgcagaagaagatctgtgtcgaagaagacccc
tgtgcctgcgagtccatagtgaaattccaggccaaagtggaggagatgctgaaggccctg
accaggaagctggaagtggtcagcaagcggctgtccatcctggagaacagaatcgtctaa
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