Perognathus longimembris pacificus (Pacific pocket mouse): 125354333
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Entry
125354333 CDS
T08928
Symbol
Msh4
Name
(RefSeq) mutS protein homolog 4
KO
K08740
DNA mismatch repair protein MSH4
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
plop03036
]
125354333 (Msh4)
Chromosome and associated proteins [BR:
plop03036
]
Eukaryotic type
Meiosis-specific proteins
Others
125354333 (Msh4)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_II
MutS_IV
AAA_14
AAA_22
nSTAND3
ATPase_2
Motif
Other DBs
NCBI-GeneID:
125354333
NCBI-ProteinID:
XP_048205902
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All DBs
Position
7:53617360..53678979
Genome browser
AA seq
931 aa
AA seq
DB search
MLRPKISSPSLSSAVSPLVGEAHPRGPRYNFGLQETPQSCPPAWASASSPPGTSGFAGDR
SRSSSSSRRPGAWPLRGSQLGSKRSYAANTVLSNFTLGTSSSSAQDTNYPQVIKTPLTAG
NPQRSGYKSWTPQIGHSATSSSAISVHSPSVIVAVVEGRGLARGEIGMASIDLKSPQIIL
SQFADNTTYAKVITKLKILSPLEIIMSNTACVVGNSTKLFTLITENFKNVNFTTIQRKYF
NETKGLEYIEQLCIAEFSTVIMEVQSKYYCLAAVAALLKYVEFIQNSVYAPKSLKICFQG
SEQTAMIDASSAQNLELLINNQDSRNNHTLYGVLNYTKTPGGSRRLRSNILEPLVDIETI
NMRLDCVQELLQDEELFFGLQSVISRFLDTEQLLSVLVQIPKQDTVNVAESKITNLIYLK
HTLELVEPLKMALKNCSTTLLRAYYGSLEDKRFGIILEKIKTVINDDARYMKGCLNMRTQ
KCYAVRSNINEFLDIARRTYTEIVDDIAGMISQLAEKYSLPLRTSFSSTRGFFIQMTTDC
MALPSGQLPSEFIKISKVKNSYSFTSADLLKMNERCQESLREIYHMTYMIVCKLLGEIYE
HIHCLYKLSDTVSMLDMLLSFAHACTLSDYVRPEFTDTLAIKQGWHPVLEKISLEKPVAN
NTYITEGSNFLIITGPNMSGKSTYLKQIALCQIMAQIGSYVPAEYSSFRIAQQIFTRIST
DDDIETNSSTFMKEMKEIAYILHNANDKSLILIDELGRGTNTEEGIGICYAVCEYLLSLK
AFTLFATHFLELCHIDVLYPNVENMHFEVQHVKNTSRNKEAILYTYKLSKGLTEEKNYGL
KAAEASSLPPSIILDAREITTQITRQILQNQKSTPEMKRQRAVYHLATRLVQTARNSQLD
PDRLRVYLSNLKKKYEEDFPQREQVTEQTEE
NT seq
2796 nt
NT seq
+upstream
nt +downstream
nt
atgttgagacccaagatttcatcaccctccctttcatctgcggtgtctcccttggtgggc
gaggctcacccgcgaggtcctcgctacaatttcgggctccaggagactcctcagagctgc
cctccggcttgggcctcggcctccagcccgccgggcacgtccgggttcgctggcgaccgg
agcaggagcagtagcagcagccgccggcctggggcctggcccttgagaggctcacagttg
ggaagcaaaagatcctatgcagcaaacacagttctatccaattttactttgggtaccagt
tcatcttctgcacaagacactaattatccacaagtgattaaaactccattgactgctgga
aatcctcagagatcaggttataaaagttggacaccacaaataggacactcagccacatcc
tcttctgcaatttctgtacactccccatcagttattgtagctgtggtagaaggaagagga
cttgccagaggtgagataggaatggcaagcattgacttaaaaagcccacaaattatatta
tcccagtttgcagacaacacaacttatgcaaaggtgatcactaagctcaaaattttatca
cctttggaaataataatgtcaaatactgcttgtgttgtgggaaattcaaccaagttgttt
actctgatcacagaaaatttcaagaatgttaacttcacaactatccagaggaaatacttc
aatgaaacaaaaggattggagtacattgaacaattatgtatagcagaattcagcactgtc
ataatggaagttcaatcgaagtattactgccttgcagctgttgcagctttgttaaaatat
gttgaatttattcaaaattctgtttatgcaccaaaatcgctgaagatttgtttccagggt
agtgaacagacagctatgattgacgcatcatcagctcaaaaccttgagttgttaattaat
aaccaggactccaggaataatcacactctctatggtgttttgaactacactaagactcct
ggagggagtagaagactccgttctaatatattagaaccactggttgatatcgaaactatt
aacatgagattagattgtgttcaagaactgcttcaagatgaggaactgttttttggactt
cagtcagtcatatcaagattccttgatacagagcagcttctttctgttttagtccaaatt
ccaaagcaagacacggttaatgtagctgaatcaaagataacaaatctgatatacctaaag
cataccttggaacttgtggaacctttaaagatggctctgaagaactgtagcactacttta
ttaagagcttactatggttccttggaagacaagaggtttgggatcatacttgagaagatc
aaaacagtgatcaatgatgatgcaagatacatgaaaggatgtctgaatatgaggactcag
aagtgctatgctgtgaggtccaacataaatgaatttcttgatattgctaggagaacatat
acagagattgtagatgacatagcaggaatgatatcacagcttgcagaaaagtacagtctt
cctctaaggacaagttttagctccactcgaggatttttcatccagatgactacagattgt
atggcactgcccagtggtcaacttccttcagaattcatcaagatttctaaagtgaaaaat
tcttatagcttcacatcagcagatttacttaaaatgaatgaaagatgccaagagtctttg
cgagaaatttatcacatgacttacatgatagtgtgtaaacttcttggtgagatatatgag
catattcattgcctatataaactctctgacactgtgtcaatgttggatatgctactgtca
tttgcgcatgcctgtactctttctgactatgttcggccagagtttactgatactttagca
atcaaacagggatggcatcctgttcttgaaaaaatatccttggaaaaaccagttgctaat
aatacctatattacagaaggaagtaactttttgattataactggaccaaatatgagtggg
aagtccacctatttaaaacaaattgctctttgtcagattatggcccaaattggttcatat
gttccagcagaatattcttcctttagaattgcccaacagatctttacaagaatcagtact
gatgatgatattgaaacaaattcatcaacatttatgaaggaaatgaaagagatagcatat
atcctacataatgctaatgacaaatcactcatattaattgatgaacttggcagaggtact
aatacagaagaaggtattggcatttgttatgctgtttgtgaatatctgctgagcttgaag
gcatttacattgtttgctacacatttcctggaactctgtcatatagatgtcttgtaccct
aatgtggaaaacatgcattttgaagtgcagcatgtaaagaacacttcaagaaacaaagaa
gcaattttgtacacctataaactttctaaaggactaacagaagaaaaaaattatggttta
aaagctgcagaagcgtcatcccttccaccctcaattatcttggatgccagagaaatcaca
actcaaattacaagacaaattttgcaaaaccaaaagagtactcctgagatgaaaagacag
agagctgtgtatcatctagctaccagacttgttcaaactgctcgaaattctcaattggat
ccagacaggttgcgagtctatttaagtaatctcaagaagaaatatgaagaagattttccc
cagcgtgaacaagtcacagaacagactgaagaatag
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