Perognathus longimembris pacificus (Pacific pocket mouse): 125354523
Help
Entry
125354523 CDS
T08928
Name
(RefSeq) calmodulin-binding transcription activator 1 isoform X1
KO
K21596
calmodulin-binding transcription activator
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
plop03000
]
125354523
Transcription factors [BR:
plop03000
]
Eukaryotic type
Other transcription factors
Others
125354523
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CG-1
Ank_2
TIG
Ank
Ank_4
IQ
Ank_5
AGRB_N
IQ_SCN5A_C
Motif
Other DBs
NCBI-GeneID:
125354523
NCBI-ProteinID:
XP_048206116
LinkDB
All DBs
Position
7:4009655..4648951
Genome browser
AA seq
1568 aa
AA seq
DB search
MILYNRKKVKYRKDGYCWKKRKDGKTTREDHMKLKVQGVECLYGCYVHSSIIPTFHRRCY
WLLQNPDIVLVHYLNVPAIEDCGKPCGPILCSINTDKKEWAKWTKEELIGQLKPMFHGIK
WTCSNGNSSSGFSVEQLVQQILDSHQTKPQPRTHNCLCTGSLGAGSSVHHKCNSAKHRII
SPKVEPRSGGYGGPAEVQHNDVSEGKHEPGHGKSASREKRNGKVAKPALLHQSSTEVSST
NQVEVPDTTQSSPVSISSGLNSDPDMVDSPVVTGVSSMAVASVMGGLSQSATVFMSEVTS
EAVYTMSPTAGPNHHLLSPDASQGLVLAVSSDGHKFAFPTAGSSEGLSMLPSNVSEELVL
STTLDGGRKIPETTMNFDPDCFLNNPKQGQTYGGGGLKVEMVSANIRHSPPAERGFGFTG
VLAKEIKTEDTSFEQQMAKEAYSSSAAAAGSGSLTLSAGSSLLPSGGGLSPSTTLEQMDF
SAIDSNKDYAAGFSQPGHSPHIHQTPSPSFFLQDASKPLPLEQNAHGGLSDSGGAFVMPT
VKTEASSQTSSCSGHVEPRLGAASSLHLMQFQANFQAMADGEVTMETSQAAEGGEVLLKS
GELQACGSEHYLQPESNGVIRTAGGVPILQSNVVQGLYPVAQPSLGHASNMELSLDHFDI
SFSNQFSDLINDFISVEGGGSTIYGHQLASGGSAALSQSEDGARAPFTQAEMCVPCCSPQ
QGSLQLSSAEGGAGTMAYMHVAEVVSAASAQGTLGILQQSGRLFMVTDYSPEWSYPEGGV
KVLITGPWQEASNNYSCLFDQISVPASLIQPGVLRCYCPAHDTGLVTLQVAFNNQIISNS
VVFEYKARALPTLPSSQHDWLSLDDNQFRMSILERLEQMERRMAEMTGSQQHKQASGGGS
SGSSGGSGSGNGASQAQCASGTGTLGSCFESRVVVVCEKMMSRACWAKSKHLIHSKTFRG
MTLLHLAAAQGYATLIQTLIKWRTKHADSIDLELEVDPLNVDHFSCTPLMWACALGHLEA
AVVLYKWDRRAISIPDSLGRLPLGIARSRGHVKLAECLEHLQRDEQAQLGQNPRIHCPPS
EEPSTESWMAQWPSEAMSSPEIPKGVTVIASTNPELRRPRSEPSNYYSSESHKDYPAPKK
HKLNPEYFQARQEKLLSTALSLEQPNIRKQSPSSKQAAPEPMSPREGVRDCSRESSPPAP
ETAAFQASGSHPVVKWSSKDLYIGVSTVQVTGNPKGTSVGKDAAPSQVRPREPMSVLMMA
NREVVTTDTGAYRDGAEHVGCSPPVDDIQVNMMTLAEHIIEATPDRIKQENFVPLESSAL
ERTEPASISSTMSWLASYLADADRLPSAAQIRSAYTEPLTPSSNTSMSPVGSPVSEIAFE
KPNLPSAADWSEFLSASTSEKVENEFAQLTLSDHEQRELYEAARLVQTAFRKYKGRPLRE
QQEVAAAVIQRCYRKYKQYALYKKMTQAAILIQSKFRSYYEQKRFQQSRRAAVLIQKYYR
SYKKCGKRRQARRTAVIVQQKLRSSLLTKKQDQAARKIMRFLRRCRHRVKELKKAKELED
IQQHPLAM
NT seq
4707 nt
NT seq
+upstream
nt +downstream
nt
atgattctctacaacaggaagaaagtgaaatacaggaaagatggatattgctggaaaaag
aggaaagatgggaaaacgacccgagaagaccacatgaaactcaaggtccagggagtcgag
tgcttgtacggctgctatgtccattcctccatcatccccaccttccaccggaggtgctac
tggctccttcagaaccccgacatcgtgctggtgcactacctgaacgtcccggccatcgag
gactgcggcaagccctgcggccccatcctctgctccatcaacaccgacaagaaggagtgg
gcaaaatggacgaaggaggagctcatcggacagctgaaacccatgttccatggcatcaag
tggacctgtagcaacgggaacagcagctcgggcttctcggtggagcagttggtccagcag
atcctcgacagccaccagaccaagccccagcctcggacgcacaactgcctgtgcacgggc
agcctgggagcgggcagcagcgtgcaccacaagtgtaacagcgccaagcaccgcatcatc
tcgccgaaggtggagccccggagcgggggctacgggggccccgcggaggtgcagcacaac
gacgtgtcggagggcaagcacgagccgggccacggcaagagcgccagccgggagaagcgg
aatggcaaggtggccaagcccgcgctgctgcaccagagcagcaccgaggtgtcgtccacc
aaccaggtggaggtccccgacaccacccagagctccccggtgtccatcagcagcggcctc
aacagcgaccccgacatggtggacagccccgtggtcacgggcgtgtccagcatggcggtg
gcctccgtgatgggaggcttgtcccagagcgccacggtgttcatgtccgaggtcaccagc
gaggccgtgtacaccatgtcccccacggccggccccaaccaccacctcctctcgccggac
gcttctcagggcctcgtcctcgccgtgagctccgacggccacaagtttgcctttcctacc
gcgggcagctcggagggcctgtccatgctgcccagcaacgtgtccgaagagctggtcctc
tccaccaccctcgacggtggccggaagattccagagaccaccatgaactttgaccctgac
tgcttcctcaataaccccaagcagggccagacgtacgggggcgggggcctgaaggtggag
atggtgagcgccaacatccgccactcgccgcccgccgagcggggcttcggcttcaccggc
gtcctcgccaaggagatcaagaccgaggacacgtccttcgagcagcagatggccaaggag
gcctactcgtcctcggcggcggccgcgggctccggctccctcacgctgagcgccggctcc
agcctcctgccgtcggggggcggcctgagccccagcaccaccctggagcagatggacttc
agcgccatcgactccaacaaggactacgcggccggcttcagccagcctggccacagcccc
cacatccaccagaccccgtcccccagcttcttcctgcaggacgccagcaagcccctcccc
ctcgagcagaacgcccacggcggcctgagcgactcggggggtgccttcgtgatgcccacg
gtgaagaccgaggcctcctcgcagaccagctcctgcagcggccacgtggagccccggctg
ggcgcggcctcctcgctgcacctcatgcagttccaggccaatttccaagccatggcggac
ggggaggtcaccatggaaacctcgcaggccgccgaggggggcgaggtgctgctcaagtcc
ggggagctgcaggcctgtggctcggagcactacctgcagcccgagagcaacggggtgatc
cgcaccgcgggcggggtccccatcctccaaagcaacgtggtccaggggctctacccggtg
gcccagcccagcctgggccacgcctccaacatggagctcagcctggaccacttcgacatc
tccttcagcaaccagttctccgacctgatcaacgacttcatctcggtggaggggggcggc
agcaccatctacgggcaccagctggcgtcggggggcagcgcggcgctctcgcagtcggaa
gacggggcgcgcgcccccttcacccaggccgagatgtgtgtcccttgctgcagcccccag
cagggcagcctgcagctgagcagcgcggagggcggggccggcaccatggcctacatgcac
gtggccgaagtggtctcagccgcctccgcccagggcaccctggggatcctccagcagagc
ggacggctgttcatggtgactgactattccccagagtggtcctaccccgagggaggagtg
aaggtcctcatcacaggcccgtggcaggaagccagcaataactacagctgcctgttcgac
cagatctcagtgcctgcatccttgatccagcccggggtgctgcgctgctattgcccagcc
catgacacgggtctggtgaccctacaagttgccttcaacaaccagatcatctccaactcg
gtggtgtttgagtacaaagctcgggctctgcccacactcccttcctcccagcacgactgg
ctgtccttggacgataaccagttcaggatgtccatcctggagcgactggagcagatggag
aggagaatggccgagatgaccggctcccagcagcacaaacaggcgagcggaggaggcagt
agtggcagcagcggcggcagcggaagcgggaacggagccagccaagctcagtgtgcctcc
gggactgggaccctggggagctgcttcgagagtcgcgtggtcgtcgtctgtgagaagatg
atgagccgagcctgctgggcgaagtccaagcatttgatccactcaaagactttccgtggg
atgaccctcttacacctggctgctgcccagggctatgccaccctgatccagaccctcatc
aaatggcgtacgaagcatgcagatagcattgatttggagctggaagtcgaccccttgaat
gtggaccacttctcttgtactcctctgatgtgggcctgcgccctggggcacctggaggct
gctgtggtgctgtacaagtgggaccggcgggccatctccatcccggactctctgggaagg
ctgcccttgggaattgccaggtcaaggggccacgtgaaattggcagagtgtctggagcac
ctgcagagagatgagcaggcccagcttgggcagaacccccggatccactgtcccccgagc
gaagagccaagtacagagagctggatggcccagtggcccagcgaggccatgagctctcca
gaaatacccaagggagtcacggtcatcgcaagcaccaatccagagctgagaagacctcgg
tctgaaccctctaattactacagcagtgagagccacaaagattatccggctcccaaaaag
cataaattgaaccctgagtacttccaggcaaggcaggagaagctgctttccactgcactg
agtctggaacagccaaatatcaggaagcagagccctagttctaagcaggctgcccccgag
ccaatgagccccagggaaggagtgagggactgcagccgggaatcctcccctcccgctcct
gagactgcagcattccaagcctctggatctcacccggtagtaaagtggagttccaaagat
ctttacattggtgtgtctacagtgcaggtgactggaaatccgaaggggaccagtgtaggc
aaggacgcagcgccttcacaggtgcgtccgcgggaaccaatgagtgtgctgatgatggca
aacagagaggtggtgaccacagacacgggggcctaccgagacggtgcagagcacgtggga
tgctctccacccgtggatgacatccaggtgaacatgatgaccttggcagaacacattatc
gaagcgacccctgaccgaatcaagcaggagaactttgtgcccctggagtcctcggcactg
gagaggacagagcctgcctccattagcagtacaatgagctggctggccagttacctagct
gatgccgatcgtctgccaagtgctgcccagatcagaagtgcgtatactgagcctctgacc
ccttcatccaacaccagcatgagccctgtaggctctcctgtcagtgaaatagcgtttgag
aaacctaaccttccctcggcagcagattggtcagaattcctgagtgcttctaccagtgag
aaggtagagaatgagtttgcccagctaactctgtcggaccatgagcagagagaactttac
gaagctgccaggcttgtccagacagctttccggaagtacaagggccgacccttgcgggaa
cagcaggaagtggccgctgccgtcattcagcgttgttacaggaaatacaaacagtacgca
ctttataaaaagatgacccaggcagccatcctgatccagagcaagttccgaagttactac
gagcagaagaggttccagcagagccggcgcgctgccgtcctcatccagaagtactaccgg
agttacaagaagtgcggcaagagacggcaggctcgccggaccgccgtcatcgtgcagcag
aagctcaggagcagtttgctaaccaaaaagcaggaccaagctgctcgaaaaataatgagg
tttctacgccgatgtcgtcacagagtgaaagaattgaaaaaggccaaggaacttgaagac
atacagcagcatcccttagcaatgtga
DBGET
integrated database retrieval system
