Perognathus longimembris pacificus (Pacific pocket mouse): 125354556
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Entry
125354556 CDS
T08928
Symbol
Ube4b
Name
(RefSeq) ubiquitin conjugation factor E4 B isoform X1
KO
K10597
ubiquitin conjugation factor E4 B [EC:
2.3.2.27
]
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop04120
Ubiquitin mediated proteolysis
plop04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
125354556 (Ube4b)
04120 Ubiquitin mediated proteolysis
125354556 (Ube4b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
plop04121
]
125354556 (Ube4b)
Enzymes [BR:
plop01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
125354556 (Ube4b)
Ubiquitin system [BR:
plop04121
]
Ubiquitin ligases (E3)
U-box type E3
125354556 (Ube4b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ufd2P_core
U-box
Motif
Other DBs
NCBI-GeneID:
125354556
NCBI-ProteinID:
XP_048206161
LinkDB
All DBs
Position
7:6055269..6169860
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AA seq
1173 aa
AA seq
DB search
MEELSADEIRRRRLARLAGGQTSQPTTPLTSPQRENPPGPPIAASAPGPSQSLGLNVHNM
TPATSPIGAAGVAHRSQSSEGVSSLSSSPSNSLETQSQSLSRSQSMDIDGVSCEKSMSQV
DVDSGIENMEVDENDRREKRSLSDKEPSSGPEVSEEQALQLVCKIFRVSWKDRDRDVIFL
SSLSAQFKQNPKEVFSDFKDLIGQILMEVLMMSTQTRDENPFASLTATSQPIAAAARSPD
RNLMLNTGSNSGTSPMFCNLGSFSASSLSSLGASGGASNWDSYSDHFTIETCKETDMLNY
LIECFDRVGIEEKKAPKMCSQPAVSQLLSNIRSQCISHTALVLQGSLTQPRSMQQPSFLV
PYMLCRNLPYGFIQELVRTTYQDEEVFKQIFIPILQGLALAAKECSLDSDYFKYPLMALG
ELCETKFGKTHPVCNLVASLPLWLPKPLSPGSGRELQRLSYLGAFFSFSVFAEDDAKVVE
KYFSGPAITLENTRVVSQSLQHYLELGRQELFKILHSVLLNGETREAALGYMAAVVNANI
KKAQMQTDDRLVSTDGFMLNFLWVLQQLSTKIKLETVDPTYIFHPRCRITLPNDETRVNA
TMEDVNEWLSELYGDQPPFSEPKFPTECFFLTLHAHHLSILPSCRRYIRRLRAIRELNRT
VEDLKNNESQWKDSPLATRHREMLKRCKTQLKKLVRCKACADAGLLDESFLRRCLNFYGL
LIQLLLRILDPAYPDITLPLNSDVPKVFAALPEFYVEDVAEFLFFIVQYSPQVLYEPCTQ
DIVMFLVVMLCNQNYIRNPYLVAKLVEVMFMTNPSVQPRTQKFFEMIENHPLSTKLLVPS
LMKFYTDVEHTGATSEFYDKFTIRYHISTIFKSLWQNIAHHGTFMEEFNSGKQFVRYINM
LINDTTFLLDESLESLKRIHEVQEEMKNKEQWDQLPRDQQQARQSQLAQDERVSRSYLAL
ATETVDMFHILTKQVQKPFLRPELGPRLAAMLNFNLQQLCGPKCRDLKVENPEKYGFEPK
KLLDQLTDIYLQLDCARFAKAIADDQRSYSKELFEEVISKMRKAGIKSTIAIEKFKLLAE
KVEEIVAKNARAEIDYSDAPDEFRDPLMDTLMTDPVRLPSGTIMDRSIILRHLLNSPTDP
FNRQTLTESMLEPVPELKEQIQAWMREKQSSDH
NT seq
3522 nt
NT seq
+upstream
nt +downstream
nt
atggaggagctgagcgctgacgagattcggcggaggcgtctggcgcgacttgctggtgga
cagacttcccagccgaccaccccacttacctctcctcagagggagaaccctcctgggcct
ccaatagcagcatcagccccaggcccatcccagagtcttggtctcaatgtccacaacatg
accccagctacctccccgataggtgcagcaggagtcgcccatcggagccagagcagtgag
ggagttagttctctcagcagctcgccttccaacagccttgagacgcaatctcagtccctc
tcacgctcccagagcatggatattgatggtgtctcttgtgagaaaagcatgtcccaggtg
gatgtggattcaggaattgaaaatatggaggttgatgaaaacgaccggagagaaaaaagg
agcctcagtgacaaggagccttcttcaggccctgaagtatctgaagagcaggccttacag
ctggtctgtaagatctttcgtgtctcttggaaggacagggacagagatgtcatctttctt
tcttctctttctgcgcagtttaagcagaacccaaaggaagtgttttctgactttaaggat
ttgattggccagattttaatggaagtgctaatgatgtccactcagacccgagatgaaaat
ccatttgccagtctgacagccacgtcacagcccatcgcagcggcagctcggtcaccagac
agaaatcttatgttgaacactggctccaattcaggaacaagccccatgttctgcaacttg
ggttccttcagtgccagctcgttatctagtttgggagcctctggtggagcaagtaattgg
gattcctacagtgaccatttcaccattgaaacttgcaaggagacagatatgctgaactac
ctcattgaatgctttgaccgagttggaatagaggaaaaaaaagcaccaaagatgtgcagc
cagccagcagtcagccagctcctgagcaacatccgctcacagtgcatatcacacaccgca
ttagtactccaaggttccctaacacagcctaggtccatgcagcagccgtccttccttgtg
ccctacatgctgtgcaggaatctcccgtatggcttcattcaagaactagtgaggaccact
tatcaggatgaagaagtgttcaagcagatctttattcccattttacaaggcctggctctt
gctgccaaagagtgctcgcttgatagtgactactttaaatacccccttatggcattaggt
gaactctgtgaaaccaagtttggaaagacgcaccccgtctgcaatttggttgcctctttg
cccttgtggttgccgaagcccttaagccctggttctggacgggagctgcagagactgtct
tacctgggggccttctttagcttctcagtgtttgcagaagatgatgctaaagtggtggaa
aagtatttctcaggtcctgccattaccctggaaaacacccgtgtggtcagccaatcacta
cagcattacttggagttgggaaggcaagagctgttcaagattctgcatagtgttctgttg
aatggtgaaacccgcgaggctgccctgggatacatggcagctgtcgtcaatgccaatata
aagaaggcccagatgcagacagatgatagattggtatctacagatggatttatgctcaat
ttcctttgggtacttcagcagctaagtacaaaaatcaagttagaaacagttgatcccaca
tatatattccacccaagatgtcggattactctccccaatgatgagacacgagtgaatgca
acaatggaggatgtgaacgagtggctgagtgaactttatggagaccagcctccgttttct
gagccaaaattccccacagaatgcttctttctcaccctacatgcccaccacctctctatt
ctacccagttgtcgtcgctatatccgcagactccgggccatacgggagctgaataggact
gtggaagatttgaaaaataatgaaagccagtggaaagattctcccctggccactaggcat
cgagaaatgttgaaacgctgtaaaactcagctgaagaaactggtacggtgcaaggcctgt
gctgacgctggcttacttgacgagagcttcctgagaagatgtctgaatttttatggcctt
ctcattcagctgctgctccgcatcctggaccctgcataccccgacataacactgccttta
aattccgatgttcccaaggtatttgcagcattgcctgagttttatgtagaagatgttgct
gaatttttattttttattgtacaatactctcctcaggtgctttatgagccctgtactcag
gatattgtgatgttccttgttgtgatgttgtgcaaccagaactacatccggaatccatac
ctagtggccaaactggtagaagtcatgtttatgaccaacccttctgttcagccacgaacc
cagaagtttttcgagatgatcgagaaccatcctctctctaccaaattactggtaccttct
ctgatgaagttctatacagatgtggagcacactggagctaccagtgagttctacgacaag
ttcacaatccgctatcacattagcaccatttttaaaagcctctggcaaaacatcgctcac
catggcacctttatggaggagttcaattctgggaagcagttcgtgcgctacataaacatg
ctgataaatgatacgacatttttgctcgatgaaagtctggagtcgctgaagcggatccat
gaagtgcaagaagagatgaagaacaaagagcagtgggaccagctgcctcgggatcagcag
caggcccggcagtctcagcttgctcaggacgagcgcgtttcacgctcttacctcgcattg
gcaacagaaaccgtggacatgttccatatcctcacaaagcaggtccagaagccgttcctc
agaccagaacttggaccccggttggctgcgatgcttaactttaatctgcagcagctctgt
ggccccaagtgtcgtgacttgaaggtggagaacccagagaagtatggatttgaacccaag
aagctgttggaccaactgacagatatttacctgcagctggactgtgctcggtttgcaaag
gccattgccgatgaccagagatcctacagcaaggaactgtttgaagaagtcatttccaag
atgcggaaggcaggaatcaaatccacaatagcaatagagaagtttaagcttcttgccgag
aaagtcgaagagatagtggctaagaacgcccgggcagagatcgactacagtgacgccccg
gacgagttcagagaccctctgatggacacgctgatgactgaccccgtgcgcctgccctct
ggcaccatcatggaccgctccatcatcctgcggcacctgctgaactctcccactgacccc
ttcaaccgccagacgctgacggagagcatgctagaaccagtgccagaactgaaagaacag
atccaagcgtggatgagagagaagcagagcagcgatcactaa
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integrated database retrieval system
