Perognathus longimembris pacificus (Pacific pocket mouse): 125354576
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Entry
125354576 CDS
T08928
Symbol
Clcn6
Name
(RefSeq) H(+)/Cl(-) exchange transporter 6
KO
K05015
chloride channel 6
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
plop04040
]
125354576 (Clcn6)
Ion channels [BR:
plop04040
]
Chloride channels
Chloride channel (CLC)
125354576 (Clcn6)
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Gene cluster
GFIT
Motif
Pfam:
Voltage_CLC
CBS
Motif
Other DBs
NCBI-GeneID:
125354576
NCBI-ProteinID:
XP_048206196
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Position
7:7328210..7360044
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AA seq
870 aa
AA seq
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MAGCRGSPCCCCRWCCCCGERETRTPEELTILGETQEEEDEILPRKDYESLDYDRCINDP
YLEVLETMDHKKGRRYEAVKWMTVFAIGVCTGLVGLFVDFFVRLFTQLKFGVVQSSVEEC
SQKGCLALSLLELLGFNLTFVFLASLLVLIEPVAAGSGIPEIKCYLNGVKVPGIVRLRTL
LCKVLGVLFSVAGGLFVGKEGPMIHSGAVVGAGLPQFQSISLRKIQFNFPYFRSDRDKRD
FVSAGAAAGVAAAFGAPIGGTLFSLEEGSSFWNQGLTWKVLFCSMSATFTLNFFRSGIQF
GSWGSFQLPGLLSFGEFKCSDSDKKCHLWTAMDLGFFVVMGVIGGLLGATFNCLNKRLAK
YRMRNVHPKPKLVRVLESLLVSLVTTAVVFVASMVLGECREMSSASQVGNGSIQLQVTSE
GVNSSIKTFFCPNDTYNDMATLFFNPQESAILQLFHQDGTFSPITLALFFVLYFLLACWT
YGISVPSGLFVPSLLCGAAFGRLVANVLKSYIGLGHIYSGTFALIGAAAFLGGVVRMSIS
LTVILIESTNEITYGLPIMITLMVAKWTGDFFNKGIYDIHVGLRGVPLLEWETEVEMDKL
RASDIMEPNLTYVYPHTRIQSLVSILRTTVHHAFPVVTENRGNEREFMKGNQLISNNIKF
KKSSILTRAGEQRRRSQSMKSYPSSELRNMCEEHAAPEEPAEKEDLLQQMLERRYTPYPN
LYPDQSPSEDWTMEERFRPLTFHGLVLRSQLVTLLVRGVCYSESQSSASQPRLSYAEMAE
DYPRYPDIHDLDLTLLNPRMIVDVTPYMNPSPFTVSPNTHVSQVFNLFRTMGLRHLPVVN
AVGEIVGIVTRHNLTYEFLQARLRQHYQTL
NT seq
2613 nt
NT seq
+upstream
nt +downstream
nt
atggcggggtgcagggggtccccgtgctgctgctgccggtggtgctgctgttgcggcgag
cgcgagacccgcaccccggaggagctgaccatccttggggagacccaagaagaggaagat
gagatccttccaaggaaagactatgagagcctcgactatgaccgctgtatcaacgaccct
tacctggaggtgctggagaccatggatcacaagaaggggcgcaggtacgaggcggtgaag
tggatgaccgtattcgccatcggagtctgcacggggctggtgggtctctttgtggacttc
tttgtgcgactcttcacccagctcaagttcggagtggtccagtcgtcggtggaggaatgt
agccagaaaggctgccttgccctgtccctcctcgagctcttgggctttaacttgaccttt
gtcttcttggcgagccttcttgtcctgattgagccagtggcagcaggttcagggatacct
gagatcaagtgctacctgaacggcgtgaaggtgccaggaatcgtgcggctccggaccctg
ctctgcaaagtcctgggagtgttgttcagcgtggctggagggctctttgtggggaaggaa
ggccccatgatccacagcggagccgtggtgggagctggccttcctcagtttcagagcatc
tccttgcggaagatccagtttaacttcccctatttccgaagtgacagagacaagcgagac
tttgtctcagctggggcagccgctggggtagctgcagcctttggggcacccattggaggc
accttgtttagtctggaagagggctcgtccttctggaaccaagggctcacgtggaaagtg
ctcttttgctccatgtctgccaccttcaccctcaacttcttccgttctgggattcagttc
ggaagttggggctccttccagctcccgggactgctgagctttggcgagtttaagtgctct
gactctgataaaaaatgtcatctctggacagctatggatttggggttcttcgtcgtgatg
ggggtcattgggggcctcctgggagccacattcaactgtctgaacaagaggcttgcaaag
taccggatgcgaaatgtgcacccgaaacctaagctcgtcagagtcttggagagcctcttg
gtgtccctggtaaccaccgcggtggtgttcgtggcctccatggtattaggggaatgccga
gaaatgtcctctgcgagtcaagtcggcaatggctccatccagctccaggtcacatcagaa
ggtgtgaattccagtatcaagacatttttttgtcccaatgatacgtacaatgacatggcc
acgctcttcttcaaccctcaggagtcggccatcctccagcttttccaccaggacgggacc
ttcagccccatcaccctggccttgttcttcgtcctctatttcctgcttgcctgttggact
tacggcatttctgtgccaagtggtctgtttgtgccctctctgctgtgtggggcagctttt
gggcgcctcgtggccaatgtcctcaaaagctacatcgggctgggccacatctactcgggg
acctttgccctgattggcgcagcggccttcttaggcggggtggtccgcatgagcatcagc
ctcacagtcatcctgatcgagtcaaccaacgagatcacctatgggctccccatcatgatc
accctgatggtagccaaatggacaggggacttcttcaacaagggcatctacgacatccac
gtgggcctgcggggcgtgccgctcctggagtgggagaccgaggtggagatggacaagctg
agagctagcgacatcatggagcccaacctgacctacgtctacccgcacacccgcatccag
tctctggtcagcatcctgcgcaccacggtccaccacgccttcccagtggtcacagagaac
cggggcaacgagagggagttcatgaagggcaaccagctcatcagcaacaacatcaagttc
aagaagtccagcatcctgacgcgcgccggggagcagcgccggcggagccagtccatgaag
tcctacccgtcgagcgagctgcgcaacatgtgcgaggagcacgcggcccccgaggagccg
gccgagaaggaggacctgctgcagcagatgctggagcgcagatacactccctaccccaac
ctgtaccccgaccagtccccgagcgaagactggacgatggaggagcgcttccgcccgctc
accttccacggcctcgtcctgcgctcccagctcgtcaccctgctcgtccgcggcgtgtgc
tactcggagagccagtcgagcgccagccagccgcgcctttcctacgccgagatggccgag
gactacccgcggtaccctgacatccacgacctggacctgacgctgctgaaccctcggatg
atcgtggatgtcaccccgtatatgaacccctcaccattcaccgtctctcccaacacccac
gtctcccaagtcttcaacctgttcagaaccatgggcctgcgccacctgcccgtggtgaac
gccgtgggagagatcgtggggatcgttacccggcacaacctgacgtacgagtttctgcag
gcccggctgcggcagcactaccagactctgtga
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