Perognathus longimembris pacificus (Pacific pocket mouse): 125354631
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Entry
125354631 CDS
T08928
Symbol
Crocc
Name
(RefSeq) rootletin isoform X1
KO
K16469
rootletin
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
plop03037
]
125354631 (Crocc)
Cilium and associated proteins [BR:
plop03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
125354631 (Crocc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rootletin
Crescentin
APG6_N
PUMA_CC
DUF3450
Motif
Other DBs
NCBI-GeneID:
125354631
NCBI-ProteinID:
XP_048206283
LinkDB
All DBs
Position
7:9998080..10046147
Genome browser
AA seq
2030 aa
AA seq
DB search
MNLGLASSPEAQLALEDVIQARQPKVPSPNKSSLLQTLESSVLGPGQEKDLSIQDPAQAS
QSASLPAHIREIIASNFSQPECPALLPAPEMASLLSLQEENQLLQQELSRVEDLLAQSRA
ERDELAIKYNAASERLEQAVRLESGELEVPEPRGLVRQSVELRRQLQEEQASYRRKLQAY
QEGQQRQAQLVQRLQAKILQYKKKCSELEQQLLDRSTELEQQRLRDTEHSRDLESALLRL
EEEQQRSASLAQVNAMLREQLDQAGSANQALSEDIRKVTSDWTRSRKELEQREAAWRREE
ETFNAYFNSEHSRLLLLWRQVVGLRRLVSEVKMGTERDLLQLSGELARTSRGVQEAGLGL
SAGLQLAEDRAEAALEKQVLLQAQLEEQLRVKVLREKELTQLQVQSDLNKADLSARVTEL
ALAVERLQNQNLEKDRVNKALSEKLEALEQAALETEDGEGLQQTLRDLAQAVLSDSESGV
QLSGSDRTADVSDGSLRGLSGPRTPSPPRRPSPGRGRSPRRGPSPACSDSSTLILIHSAL
HKRQLQVQDMRGRYEASQDLLGTMRKQLSDSEGERRALEEQLLLLRDKTDGATQAQEDAQ
HEAQRLRSANDLLNREKGSLAHSLQVAQQQTQELRQELEKLQAAHEELRRQRDQLEEEQE
DAVQDGARVRRELERSHRQLEQLEAKRSGLAKELVEVREALSCATLQRDVLQAEKAEVAE
VLTKAEAGRVELELSLTKLRAEEASLRDSLSKLSALNESLAQDKLELNRHVAQLEEEKAA
LLGRQQQAQQEAVLALEEQERLEQLRLEQEVERQGLEGSLHVAEQAREALEQQLPTLRSE
RSRLQEQLAQLSRQLTVREQELEQAQRESQRQAEALERAAREKEALAKERASLAVQLAAA
EREGRTLSEEASRLRLEKEALEGSLFEVQRQLAQLEARREQLEADGQALLLAKETLTGEL
AGLRQQMVTTEEKAALDKELMAQKLVQAEREAQASLREERAAHEEDVQRLQREKEAAWRE
LQAERTQLQGQLQREREELLARMESEKEELSEEIAALQQERDEGLLLAESEKQQALSLKE
SEKTALSEKLMGTRHSLAAISLEMERQKRDAQSRQEQDRSTVNALTSELRDLRAQLEEAA
GAHAQEVKRLQEQARDLGRQREASLREAEELRTQLRLLEDTRDGLRRDLLEAQRKVRDSQ
EGQEAQRMEASELRRSLSEGVKEREALRRSNEELRAAVKKAESERISLKLASEDKEQKLA
LLEDARAALGKEAGELRAGLQEVERSRLEARRELQELRRQMKMLDTDNTRLSRELAELQG
RLALGERAEKESKREALGLRQRIVKGEASLEALRQELQGSQRKLQEQEGEFRARERGLQS
SLEEARGAEKRQLDAARGLELRLEAARAEATELALRLSAAEGRAQGLEAELARVEAQRRA
AEAQLGGLRSALRRGLGLGRAPSPAPRLALGSPARDGLAPAGGSRDGCSSPNPVERSPGS
QPPSPGPATSPASPDLEPEAVRGALRDFLQELRSTQRERDELRAQTRALSGQLAEMEAER
DSAVVRVRQLQKAVSESEEARRSVDGRLSGAQAELVLQEESVRRSERERRATLDQVAALE
RSLQASESELRASQEKMSKMKGAEAKLESDKRRLKDVLDACESRTIKLELQRRALEGELQ
RSRLGLSDREAQAQALQDRVDFLQRQVADSEVKAGTLQLTVERLNAALAKVEESEGALRG
KVQSLTEALAQSSASLASTQDKNLHLQKALTACEHDRQVLQERLDAARQALSEARKQSSS
LGEQVQTMRGELAELELQRAEAEGQLQQLREVLGQRQEGEAAALRTVRELQEERQRLQER
LGSLQRALAQLEAEKRGAERSAQRLDKDRGALRRTLDQVEREKLRSHEDAVRLSAEKGRL
GRTLTGAELELAEAQRQIEQLEAQVEALEQNHGPAPPEGAGQQGLELQQEVARLRSAQVQ
TERALEAREHVHRQRVRGLEAQVATLKGQLQQELRRSSASCSLPSGTPEK
NT seq
6093 nt
NT seq
+upstream
nt +downstream
nt
atgaacctggggctggcgagctcacctgaggcccagctggcactagaggacgttatccag
gccaggcagcccaaagtaccaagtcccaacaagtcttctcttctgcagacactggagagc
agtgtcctgggcccaggccaagaaaaggacctgagcattcaagacccagcccaggcctcc
caatctgccagcctgcccgcccacatcagggagatcatcgccagcaacttctcccagcct
gagtgcccagccctactgcctgccccggagatggcctcgctgctgtcccttcaggaggag
aaccagctgctgcagcaagagctgtcccgtgtggaggacctgctggcccagagccgagcc
gaacgcgatgagcttgccattaagtacaatgcagccagtgagaggctggagcaagctgtg
cggctggagtctggggagctggaggtgccagagcccagggggctggtacggcagagcgtg
gagctgcggaggcagctgcaggaggagcaagcctcctacagacgcaagctgcaggcctac
caggagggccagcagcggcaggcccagctagtgcagcggctgcaggccaagattctgcag
tataagaagaagtgctcggagctggagcagcagcttctggacagatccacagagctggag
cagcagcggctgagggacacagagcacagccgagacctggagagtgccctcctccgcctg
gaggaggagcagcagaggagtgccagtctggcccaggtgaatgctatgcttcgagagcag
ctggaccaagcaggctctgccaaccaggctctgagtgaggacattcgcaaagtgaccagt
gactggacccgcagccgcaaggagctggaacagcgggaggcagcgtggcggcgtgaggag
gagaccttcaatgcctacttcaacagcgaacacagccgcttgctcctcctgtggaggcag
gttgtggggcttcgacggctggtcagcgaggtgaagatgggcacggagagggacctgctg
cagctgagtggggagctggcccggacctcacggggtgtgcaggaggcaggcctggggctg
agtgcggggctgcagctggcagaggaccgggccgaggcagctctggagaagcaagtgctg
ctgcaggcccagctggaggagcagcttcgggtcaaggtacttcgagagaaggagctgact
caactgcaggtgcagagtgacttgaacaaggctgacctcagtgccagagtgacagagctg
gctctggcagtggagcgcctccagaaccagaacctggagaaggatcgggtcaacaaggca
ctgtctgagaagctcgaggccctggagcaggcagccttggagacggaggatggagagggg
ctgcagcagactctgagggatttggcacaggctgtcctgtctgattccgagagcggcgtc
cagctaagcggctcagaccgcacagcagatgtctctgacggcagtctgcgagggctctca
ggaccccgcaccccgtccccaccacggcgcccctcaccgggccgtggccgatcaccccgc
cgaggcccatcccctgcctgttctgactcctccactctcatcctgatccactctgccctg
cacaaacgccagctgcaggtccaggacatgcgcgggcgctatgaagcaagccaggacctg
ctgggcaccatgcggaagcagcttagtgacagtgagggtgagcggcgggccctagaggaa
cagctgctgctcttgcgggacaagacggatggtgccacccaggcccaagaggatgcccag
catgaagcccagcgtctgcgcagtgccaatgaccttctgaacagggagaagggaagcctg
gcccacagtctccaggtggctcagcaacagactcaggagctgcgccaggagctggagaag
cttcaggctgcgcacgaggagctgcggcgccagcgggaccagctagaggaagagcaggag
gatgcagtgcaagatggagcccgggtacgcagggagcttgagcgcagccatagacagcta
gagcagctggaggcgaagcgctcggggctggcgaaggaactggtggaagtgcgggaagcg
ctgagctgcgccacgctgcagcgggacgtgctgcaggctgaaaaggccgaggtggctgag
gtgctgaccaaggcggaggccggccgcgtggagcttgagctgtccctgaccaagctgagg
gcagaggaggcctccctgcgggactccttgtccaagctgagcgccctcaatgagagcctc
gcccaggacaagctggagctgaaccgtcacgtcgcccagctggaggaggaaaaggcggcc
ctgctgggcaggcagcagcaggcccagcaggaggctgtcctggctctggaggagcaggag
cggctggagcagctgcggctagagcaggaggtggagcggcagggcctggagggctccctg
catgtggcggagcaggcccgggaggcgctggagcagcagctccccacactgcgcagtgag
cgcagccggctacaggagcagctggcccagctctcccggcagctgactgtgcgggagcag
gagctggagcaggcccagagagagtcccagcggcaggccgaggctctggagcgggcagcc
cgggagaaggaagcactggctaaggagcgggccagtctggccgtgcagctggctgcagct
gagcgggaaggccggaccctgtcagaggaggcctcgcgcttgaggttggagaaggaagcc
ttggagggcagcctgtttgaggtgcagaggcagctggcccagctggaggcccgtcgggag
cagttagaagctgatggacaggccctgctgctggccaaggagaccctgacaggggagctg
gcaggtctgcggcagcaaatggtaaccacagaagagaaagcggctctggataaggagctg
atggcacagaagctggtgcaggccgagcgggaggcgcaggcctctctgcgggaggagcgg
gcagcccacgaggaagatgtccagcggctgcagcgggagaaggaagctgcatggcgggag
ctgcaggcagagcggacccagctgcagggccagctgcagcgggagcgagaagagctgctg
gcccggatggagtctgagaaggaggagctgagtgaggagatcgctgccctgcagcaggag
cgggatgagggcctgctcctggccgagagtgagaagcagcaggccttgtccctgaaggag
tccgagaagacggcgctgtcagagaagctgatggggacccggcacagtctggctgccatc
tctctggaaatggagcggcagaagcgagatgctcagagccgccaggagcaggaccggagc
acggtgaatgccctgacatctgagctgcgggacctccgcgcccagctggaggaggctgct
ggtgcccatgcccaggaggtcaaaaggctgcaggagcaggcccgggacctgggccggcag
cgggaggcctcccttcgtgaggctgaagagctgcggactcagctgcgcttgctggaggac
acccgtgatgggctgcggcgggaccttctcgaggcccagcgcaaggtgcgggacagccag
gagggccaagaagcccagcgcatggaggccagtgagctgcggcgcagtctaagtgagggc
gtcaaggagcgcgaggccctgcggcgctccaacgaggagcttcgggctgccgtgaagaag
gccgagagcgagcgcatcagcctgaagcttgccagcgaagacaaggaacagaagctggcc
ctcctggaggacgcgcgtgcggctctgggcaaggaggccggggagctgcgggctgggctg
caggaggtggagcgctcccggctggaggcccggcgtgagctgcaggaactcaggcggcag
atgaagatgctggacactgacaataccaggctgagccgggagctagcagagctgcagggc
cgcctggccctgggggagcgggctgagaaagagagcaagcgggaggccctgggcctcagg
cagaggatagtgaagggcgaggccagcctggaggccttgcggcaggagctccagggatcc
cagcggaagctgcaggagcaggagggcgagttccgggcccgagagcgaggtctgcagagc
tctctggaggaggcgcgcggcgctgagaagaggcagctggacgcggcccgcggactggag
ctgaggctggaggcggcccgggccgaggccacggagctggcgctgcggctgagcgcggcc
gagggtcgggcgcagggcctggaggcggagctggcccgcgtggaggcgcagcgccgggcg
gccgaggcccagctcggcggcctgcgctccgccctgcgccggggcctggggctcggccga
gcgcccagccccgccccgcggctggcgctgggctccccagcccgcgatgggcttgcccct
gctggaggaagcagggatggatgtagcagccccaaccctgtggagcgcagccctgggtcc
cagccaccctccccaggacctgccacctccccagcgtctcctgacctagagcctgaggca
gtgcggggagccctccgggacttcctgcaggagctgcggagcacccagcgagagcgggat
gaactccgggcccagaccagagcccttagtggtcagctggctgagatggaggctgagagg
gacagcgcggtagtgcgggtcaggcagctgcagaaggccgtgtctgagagcgaggaagcc
cggcgcagcgtggatgggcggctgagcggggcccaggcggagctggtgctgcaggaggag
agcgtgcggcgcagcgagcgggagcgcagggctacgctggaccaggtggctgcgctggag
aggagtctgcaggcctcggagagcgagctccgggccagccaggagaagatgagcaagatg
aagggtgcggaggcgaagctggagagcgacaagcggcgcctgaaggacgtcctggatgcc
tgcgagagccgcaccatcaagctggagctgcagcggcgcgcgctcgagggcgagctacag
cgcagccgcctgggcctcagcgaccgcgaggcccaggcccaggccctccaggaccgggtg
gacttcctgcagagacaggtggcagacagcgaggtgaaggcaggaaccttgcagctgacg
gtggagcggctgaacgcagccctggccaaggtggaggagagcgagggagccctgcggggc
aaagtccaaagcttgactgaggctctggcccagagcagtgccagcctcgccagcacccaa
gataagaacctgcaccttcagaaggccctcaccgcctgtgaacatgaccgccaagtgctc
caggaacggctcgacgctgcccggcaggcattgtctgaagctcggaagcagagcagctct
ctgggcgagcaggtgcagacgatgcggggagagctggccgagctggagctgcagcgggca
gaggccgaagggcagctgcagcagctgcgggaggtgctggggcagcggcaggagggcgag
gctgcggccctgcgcaccgtgcgggagctgcaggaggagcggcagcggctgcaggagcgc
ctgggcagcctgcagcgcgccctggcacagctggaggccgagaagcgcggggcggagcgc
tcagcccagcggctggacaaggaccgcggggctctcaggaggacgctggaccaggtggaa
cgcgagaagctccgcagccacgaggacgcggtgcggctgagcgccgagaagggccgcctg
ggccgcaccctcaccggggccgagctggagctggccgaggcccagaggcagatcgagcag
ctggaggcccaggtggaggccttggagcagaatcatggccccgcgccgccggagggggcc
gggcagcaagggctggagctgcagcaggaggtggcgcgcctgcgcagcgcccaggtgcag
actgagcgcgctctggaggcgcgggagcacgtccaccgccagcgggtacgggggctggag
gcgcaggtggccaccctgaaggggcagctgcagcaggagcttcgaaggagctccgcgtcc
tgctccctgccctctggcaccccggagaaatga
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