Perognathus longimembris pacificus (Pacific pocket mouse): 125354692
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Entry
125354692 CDS
T08928
Symbol
Zbtb40
Name
(RefSeq) zinc finger and BTB domain-containing protein 40
KO
K10512
zinc finger and BTB domain-containing protein 40
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
plop03000
]
125354692 (Zbtb40)
04121 Ubiquitin system [BR:
plop04121
]
125354692 (Zbtb40)
Transcription factors [BR:
plop03000
]
Eukaryotic type
Zinc finger
Cys2His2 BTB-ZF factors
125354692 (Zbtb40)
Ubiquitin system [BR:
plop04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul3 complex
Adoptor and target recognizing subunit (BTB)
125354692 (Zbtb40)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
BTB
Zf-C2H2_ZNF451_C
zf-met
zf-C2H2_jaz
XAF1_C
zf-C2H2_PRDM15
DUF1942
zf-C2H2_11
zf-C2HC_2
BTB_KLHL33
zf-C2H2_8
Motif
Other DBs
NCBI-GeneID:
125354692
NCBI-ProteinID:
XP_048206411
LinkDB
All DBs
Position
7:13448218..13528575
Genome browser
AA seq
1296 aa
AA seq
DB search
MVKALLFPSGRSVRVLYGAVNKEPQFESVLSRLILTEWTLEGEWKRRPGGQAGFMELPNY
SQQLLLQLYTLCKEQQFCDCTISIGTIYFRAHKLVLAAASLLFKTLLDNTDTISIDASVV
SPEEFALLLEMMYTGKLPVGKHNFSKIISLADSLQMFDVAVSCKNLLTSLVNCSVQGPVV
RDVLVPSSEICRKEAAKPQVEVLSSEGARETPSSLEGFNTSGSTGKAESQEAIPVVPRET
SADSSTAKEVQGNTEMPVETPLLPKVCPPSPVEQTFSEAKRASTEPECEGKQFQLNFLLE
NENVFSDALLVTQDILKKLEECSEIKGPQKEIIAECFKGEGGCPAFQRLLDKVQDESLDV
QSALCLLRLCQNAASVAKSALLTSDPEGVAPVQPEGSTEEGKTLSVLLLEHKEDLIQSIT
QLRPIVEFLETAKEEFLPGSQKRMILNSCKCKTPKEAIENWLHTMTKEKTLTAESLVKVL
QAVKTTLPNLGLLLENLQKLAPLPSVPVQPSPEDYGTELLRHYHENLSEIFTDNQALLKV
ISQVKSLAPGEREVMEKLVERDSDSGGFSSLMSAALEKETLSATAIWQLLLAARETKTCP
LNLLLEQIGREPGAHAFFQAVTAPESAALEAILRHRKLITEAIQQRPVLQHFSSDEKRLV
ETLKEILSISSETASPEASLRAVLSRAMEKSVSAMEVCHLLCSVHRSFPGLQPVMQELAC
IGFLAKEKGEKEMWKLSDKFYHEASNKENEKTAEVTREGCQPIEQKGKEETGPLPEQQEK
DTSASPDSAKKSFVCKACDKSFHFYCRLKVHMKRCRVAKSKQVQCKDCTETKDSKKELEK
HQLEAHGTGGEPEIPKKKKKRLPVTCDLCGREFAHASGMQYHKLTEHFDEKPFSCEECGA
KFAANSTLKNHLRLHTGDRPFMCKHCLMTFTQASALAYHTKKKHSEGKMYACQYCDAVFA
QSIELSRHVRTHTGDKPYVCRDCGKGFRQANGLSIHLHTFHNIEDPYDCKKCRMSFPTLQ
DHRKHIHEVHSKEYHPCPTCGKIFSAPSMLERHMVTHVGGKPFSCGICNKAYQQLSGLWY
HNRTHHPDVFAAQNHRSSKFSSLQCSSCDKTFSSTMEHKAHIKAEHADLKFHECDQCKEL
FPTPALLQVHVKCQHSGSQPFRCLYCTATFRFPGALQHHVTMEHFKQSESTFPCELCGEL
FTSQAQLDSHVESEHPKVMGMEAQAAASQMVQVIQAPEPAAPTEQVITLEETQLAGSQVF
VTLPNSQTSQASSELVAVTVEDLLDGTVTLICGEAK
NT seq
3891 nt
NT seq
+upstream
nt +downstream
nt
atggtgaaagctttattgttcccttcgggcaggagtgttcgtgtcctctacggcgctgtc
aataaagaaccgcagtttgaatcggtgctgagcaggctgatcctcactgagtggactctg
gaaggagagtggaagagaagacctggaggccaagctggcttcatggagctccccaactat
agccagcagctgctgctacagctatacacactgtgcaaggagcagcagttctgtgactgt
actatctctataggaaccatctacttcagggctcacaagctagtcctggctgctgctagc
ctcctcttcaaaaccctcctggacaacacagataccatctccatcgatgcctctgtggtg
agccctgaggagtttgccctcttgcttgaaatgatgtacactggcaaactaccagtgggc
aagcacaacttctccaaaatcatctctttagcagatagcctgcagatgtttgatgtggct
gttagctgtaaaaatctcctgaccagccttgtaaactgctctgtccaggggccagtggta
agggatgtcttggtgccatcctcagagatttgcaggaaggaagctgcaaagcctcaagta
gaagtcctttcttctgaaggtgccagggagactccttcttctttggaggggtttaacact
tcagggagcactgggaaagcagaaagccaggaagccatcccggtagttccacgggaaacg
agtgcagattcttccactgccaaggaagttcaggggaacacagagatgccagtggagact
cctcttctgcctaaagtttgtcctccctcccctgtggaacaaacctttagtgaagcaaaa
agggcaagcacagaaccagagtgtgaggggaaacaattccagttgaattttctcctagaa
aatgagaatgtcttttcagatgcactcttggttacccaggatattttgaagaaactggaa
gaatgctcagaaattaaaggcccacagaaggagatcattgcagaatgcttcaagggtgaa
gggggttgtccagcattccagaggctcctggacaaagttcaagatgagagtctggatgta
cagtctgctttgtgtctgctgaggctgtgccagaatgctgcttcagtggccaaatccgct
ctgttaacctcagacccagaaggtgtggcaccagtgcagccagaagggagcacagaggag
ggaaagaccttgtctgttctgttactggaacacaaagaggacttgatacagagtataaca
cagttgagacctattgtggagttcctggaaacagccaaggaggaattcctgcctggctcc
cagaaaaggatgattctgaattcctgcaagtgcaaaacacccaaggaggctatagaaaat
tggttgcacacaatgactaaagagaagacactgaccgcggagagtttggtgaaagtcctc
caggctgtaaagacaaccttgccaaacttgggccttctgctggaaaatttgcagaaatta
gctccgctgcccagtgtcccagtccaaccaagccctgaagactatgggactgagctactg
agacactatcatgaaaacctctctgagattttcacagacaaccaggcactgctgaaggtc
atctcacaggtgaagagtttggcccctggagaaagagaggtcatggagaagctcgtggaa
cgggactctgattctggtggtttcagttcactgatgtcagcagctctagaaaaagagaca
ctctcagcaacagccatttggcaactattgctagcagctcgggagacaaagacttgccct
ttgaacttgctcctggaacaaataggaagagagcctggtgcccatgctttcttccaggca
gtgaccgcccctgaaagtgctgccttagaagccatcctgaggcaccgcaagttgatcaca
gaggccatccagcagaggcctgtgctccagcacttttcctcagatgagaagcgcctggtg
gagactctgaaagagattctgagcatttcctctgagacagccagccctgaagcttccctg
agagcagtgctgagcagagctatggaaaagtcagtctcagccatggaagtctgtcacctc
ctgtgcagtgtccacagatctttccctggcctacagcctgtcatgcaggagctggcatgc
attggcttccttgctaaggaaaagggtgagaaggaaatgtggaagctgagtgataaattt
taccatgaagcaagcaacaaagaaaatgagaagacagctgaggtgactagagaaggctgc
cagcccatagaacaaaagggaaaggaggagactggtcccctgccagagcaacaagaaaag
gacacttctgcctccccagactctgccaagaagagctttgtctgtaaggcctgtgacaag
agcttccatttctactgccgccttaaggtacacatgaagcgttgccgggtggccaagagc
aagcaggtgcagtgcaaggactgcactgagaccaaggactcaaagaaggagctggagaaa
catcagctggaggcccacggtacgggcggagagcctgaaatccccaagaagaagaagaag
aggcttcccgtgacctgtgacctctgtggaagagagtttgcccacgcctcaggcatgcag
taccacaagctgacggagcactttgatgagaaaccattctcctgtgaggaatgtggggca
aagtttgcagccaactctaccctgaagaaccacctccgcctgcacactggggaccgcccg
ttcatgtgcaagcactgcctcatgactttcacacaggcctcagccctggcttaccacacc
aagaagaagcactctgaagggaaaatgtacgcatgccagtattgtgacgctgtgttcgcg
cagtccattgagctgtcccgccacgtgaggacccacactggagacaagccatacgtctgc
agggactgtggcaagggcttccggcaagccaatggcctctctatccacctgcacaccttc
cacaacatagaagatccttacgactgcaagaaatgtaggatgagtttccccactctgcag
gatcaccggaagcacatccatgaggtgcactccaaagagtaccacccctgccccacatgt
ggaaagatcttcagtgccccttccatgctggagcggcacatggtcacccacgtgggagga
aagcccttcagctgcgggatctgcaacaaggcctaccagcaattgtctggtctgtggtac
cacaaccggacccaccacccggacgtgtttgctgctcagaaccatcgctcatccaagttc
tcttcactccagtgcagctcctgtgacaaaaccttctcaagcacaatggaacacaaggca
cacatcaaagcagagcatgcagatttgaagttccacgagtgtgaccagtgtaaggagctc
ttccccacaccagctctgctccaggtgcatgtcaagtgccagcattcagggtcacagcca
ttcaggtgtttgtactgcacggccacatttcgcttccccggagccttgcagcaccacgtc
accatggagcactttaagcagtcagagagcacatttccctgcgagctctgtggtgagctc
tttacttcccaggctcagcttgacagccatgtggagtctgagcacccaaaggtgatgggc
atggaggcccaggcagctgcctcacagatggtacaggtgatccaggctccagagccggcg
gcccccactgagcaggtgatcactttggaggagacccagcttgctggctcacaggtgttt
gtgacattgcccaattcacagacctctcaagccagctctgagcttgtggcggtgactgtg
gaggatttgctggatggcactgtcactctgatctgtggtgaggccaagtga
DBGET
integrated database retrieval system
