Perognathus longimembris pacificus (Pacific pocket mouse): 125354717
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Entry
125354717 CDS
T08928
Symbol
Hmgcl
Name
(RefSeq) hydroxymethylglutaryl-CoA lyase, mitochondrial isoform X1
KO
K01640
hydroxymethylglutaryl-CoA lyase [EC:
4.1.3.4
]
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop00280
Valine, leucine and isoleucine degradation
plop00650
Butanoate metabolism
plop01100
Metabolic pathways
plop04146
Peroxisome
Module
plop_M00036
Leucine degradation, leucine => acetoacetate + acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
125354717 (Hmgcl)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
125354717 (Hmgcl)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
125354717 (Hmgcl)
Enzymes [BR:
plop01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.4 hydroxymethylglutaryl-CoA lyase
125354717 (Hmgcl)
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Motif
Pfam:
HMGL-like
Motif
Other DBs
NCBI-GeneID:
125354717
NCBI-ProteinID:
XP_048206458
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Position
7:complement(14433426..14449787)
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AA seq
325 aa
AA seq
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MASVRKVLPRRVAGLASLRAVSTSSMGTFPKQVKIVEVGPRDGLQNEKSIVPTAVKIRLI
DMLSEAGLPVIEATSFVSPKWVPQMADHTEVLKGIQKFPGISYPVLTPNMKGFEAAVAAG
AKEVSIFGAVSELFTRKNVNCSVAESFQRFDGIMKAAQAANIPVRGYVSCTLGCPYEGKI
SPAKVAEVAKKLYSMGCYEISLGDTIGVGTPGLMKDMLSAVMHEVPVAALAVHCHDTYGQ
ALANTLMALQMGVSVVDSSVAGLGGCPYAQGASGNLATEDLVYMLSGLGIHTGVNLQKLL
EAGDFICQALNRKTSSKVAQATCKL
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atggcgagcgtgcggaaggtgctgccgcggcgagtggcgggcttggcgtccctccgggct
gtcagcacctcatctatgggcacctttccaaagcaggtgaagattgtggaagttggcccc
cgagatggtctacaaaatgaaaagagtattgtacctactgctgtgaagatcaggctgatc
gacatgctttctgaagcggggctccccgtcatagaagccaccagctttgtgtctcccaaa
tgggttcctcagatggctgaccacactgaagtcttgaagggcattcagaagtttcctggc
atcagctacccagtcctgaccccaaacatgaaaggctttgaggcagcggtggctgccgga
gccaaggaagtaagcatcttcggtgctgtctcggagctcttcaccaggaagaacgtcaac
tgctccgtagccgagagcttccagcgctttgacgggatcatgaaggccgctcaggccgcc
aacattcccgtgcgcgggtacgtctcctgtacccttggatgcccttatgaagggaagatc
tccccggctaaagtggctgaggttgccaagaagctgtactccatgggctgctatgagatc
tccctaggggataccattggtgtgggcaccccggggctcatgaaagatatgctgtctgct
gtcatgcacgaggtgcctgtggctgccctggctgtccactgccatgacacctatggccaa
gccctggccaacactttgatggctctgcagatgggagtgagtgttgtggactcttctgtg
gcgggactcggaggctgcccctatgcacagggggcatcggggaatttggccactgaggac
ctggtctacatgctctcgggcttgggcattcacacgggtgtaaacctccagaagctcctg
gaagctggggactttatctgccaagccctgaacagaaaaaccagctccaaagtggctcag
gctacctgtaaactctga
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