KEGG   Perognathus longimembris pacificus (Pacific pocket mouse): 125354742
Entry
125354742         CDS       T08928                                 
Name
(RefSeq) syndecan-4-like
  KO
K16338  syndecan 4
Organism
plop  Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop04512  ECM-receptor interaction
plop04514  Cell adhesion molecules
plop04820  Cytoskeleton in muscle cells
plop05205  Proteoglycans in cancer
plop05418  Fluid shear stress and atherosclerosis
Brite
KEGG Orthology (KO) [BR:plop00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    125354742
   04514 Cell adhesion molecules
    125354742
 09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    125354742
 09160 Human Diseases
  09161 Cancer: overview
   05205 Proteoglycans in cancer
    125354742
  09166 Cardiovascular disease
   05418 Fluid shear stress and atherosclerosis
    125354742
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00535 Proteoglycans [BR:plop00535]
    125354742
Proteoglycans [BR:plop00535]
 Cell surface proteoglycans
  Syndecan family (transmembrane HSPG)
   125354742
SSDB
Motif
Pfam: Syndecan
Other DBs
NCBI-GeneID: 125354742
NCBI-ProteinID: XP_048206507
LinkDB
Position
1:51941428..51942191
AA seq 198 aa
MTPARPLLLLCVGLPAAVAESIRETEVIDPQDVLEGGYFSGDLPDDEDIGGPGQDSDDFE
LSGSGDMDDSEDHRTFPEVIHPLVPLNNHIPEREGPGRRVPTETGELEENEVIPKRIAPF
GDEDVSNRVSMSSTAQGSNIFERMEVLEALIVGGVVGILFAVFLILLLVYRMKKKDEGSY
NLGKKPIYKKAPTNEFYA
NT seq 597 nt   +upstreamnt  +downstreamnt
atgacgcctgcccgcccgctgctgctgctctgcgtgggcctccccgcagctgttgccgag
tcgatccgagagactgaagtcatcgaccctcaggatgtcctggaaggtggatacttctct
ggagacctcccagatgacgaggatatcggagggccggggcaggacagcgatgactttgag
ctgtcaggctctggagatatggatgactcagaggaccataggaccttccccgaagtgatc
catcccttggtgcctctaaataaccacatcccagagagagaagggcctgggaggcgggtg
cccacagaaactggggaactggaggagaatgaggtcatccccaagaggatcgcacccttt
ggggatgaggatgtatctaacagagtgtccatgtccagcaccgcccagggcagcaacatc
ttcgagagaatggaagtcctggaagctctgattgtgggtggtgttgtgggcatcctcttt
gctgtgttcctgatcctgttgctggtatatcgcatgaaaaagaaggacgaaggcagctac
aacctgggcaagaaacccatctacaagaaagcccccaccaatgagttctacgcatga

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