Perognathus longimembris pacificus (Pacific pocket mouse): 125354831
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Entry
125354831 CDS
T08928
Symbol
Pum1
Name
(RefSeq) pumilio homolog 1 isoform X1
KO
K17943
pumilio RNA-binding family
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop05017
Spinocerebellar ataxia
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09160 Human Diseases
09164 Neurodegenerative disease
05017 Spinocerebellar ataxia
125354831 (Pum1)
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Gene cluster
GFIT
Motif
Pfam:
PUF
PUF_NOP9
DUF6922
Motif
Other DBs
NCBI-GeneID:
125354831
NCBI-ProteinID:
XP_048206659
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All DBs
Position
7:complement(19013793..19137997)
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AA seq
1189 aa
AA seq
DB search
MSVACVLKRKAVLWQDSFSPHLKHHPQETANPNMPVVLTSGTGSQAQPQPAANQALAAGT
HSSPVPGSIGVAGRSQDDAMVDYFFQRQHGEQLGGGGSGGGGYNNSKHRWPTGDNIHAEH
QVRSMDELNHDFQALALEGRAMGEQLLPGKKFWETDESSKDGPKGIFLGDQWRDSAWGTS
DHSVSQPIMVQRRPGQSFHVNSEVNSVLSPRSESGGLGVSMVEYVLSSSPGDSCLRKGGF
GPRDADSDENDKGEKKNKGTFDGDKLGDLKEEGDVMDKTNGLPVQNGIDADVKDFSRTPG
NCQNSANEVDLLGPNQNGSEGLAQLTSTNGAKPVEDFSNMESQSVPLDPMEHVGMEPLQF
DYSGTQVPVDSAAATVGLFDYNSQQQLFQRPNALAVQQLTAAQQQQYALAAAHQPHIAGL
APAAFVPNPYIISAAPPGTDPYTAGLAAAATLGPAVVPHQYYGVTPWGVYPASLFQQQAA
AAAAATNSANQQTTPQAQQGGQQVLRGGASQRPLTPNQNQQGQQTDPLVAAAAVNSALAF
GQGLAAGMPGYPVLAPAAYYDQTGALVVNAGARNGLGAPVRLVAPAPVIISSSAAQAAVA
AAAASANGAAGGLAGTTNGPFRPLGTQQPQPQPQQQPGNNLASSSFYGNNSLSSNSQSSS
LFSQGSAQPANTSLGFGSSSSLGATLGSALGGFGTAVANSNTGSGSRRDSLTGSSDLYKR
TSSSLTPIGHSFYNGLSFSSSPGPVGMPLPSQGPGHSQTPPPSLSSHGSSSSLNLGGLTN
GSGRYISAAPGAEAKYRSASSASSLFSPSSTLFSSSRLRYGMSDVMPSGRSRLLEDFRNN
RYPNLQLREIAGHIMEFSQDQHGSRFIQLKLERATAAERQLVFNEILQAAYQLMVDVFGN
YVIQKFFEFGSHEQKLALAERIRGHVLSLALQMYGCRVIQKALEFIPSDQQVINEMVREL
DGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRILEHC
LPDQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKF
ASNVVEKCVTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAEPGQR
KIVMHKIRPHIATLRKYTYGKHILAKLEKYYMKNGVDLGPICGPPNGII
NT seq
3570 nt
NT seq
+upstream
nt +downstream
nt
atgagcgttgcatgtgtcttgaagagaaaagcagtgctttggcaggactctttcagcccc
cacctgaaacatcaccctcaagaaacagctaatcccaacatgcctgttgttttgacatct
ggaacagggtcgcaagcgcagccacagccagctgcaaatcaggctcttgcagctgggaca
cactccagccctgtcccaggatccataggagttgcaggccgttcccaggacgacgctatg
gtggactacttctttcagaggcagcatggtgagcagcttgggggaggaggaagtggtgga
ggcggctataataatagcaaacatcgatggcctactggggataacattcatgcagaacat
caggtacgttctatggatgaactaaatcatgattttcaagcacttgctctggagggaaga
gctatgggagagcagctcttgccaggtaaaaagttttgggaaacagatgaatccagcaaa
gatggaccaaaaggaatattcctgggtgatcaatggcgagacagtgcctggggaacatca
gatcattcagtttcccagccaatcatggtgcagagaagacctggtcagagtttccatgtg
aacagtgaggtcaattctgtactgtccccacgatcggagagtgggggactaggcgttagc
atggtggagtatgtgttgagctcatccccgggcgattcctgtctaagaaaaggaggattt
ggcccaagggatgcagacagtgatgaaaacgacaaaggtgaaaagaagaacaagggtacg
tttgatggagataagctaggagatttgaaggaggagggtgatgtgatggacaagaccaat
ggtttaccagtgcagaatgggattgatgcagacgtcaaagattttagccgtacccctggt
aattgccagaattctgctaatgaagtggatcttctgggtccaaaccagaatggttctgag
ggcttagcccagctgaccagcactaatggtgccaagcccgtggaggatttctccaacatg
gagtcccagagtgtccccttggaccccatggaacatgtgggcatggagcctctgcagttt
gattattcaggcacgcaggtacctgtggactcagcagccgcaactgtgggactttttgac
tacaattctcaacaacagcttttccaaagacccaacgcacttgctgtccagcagttgaca
gctgctcagcagcagcagtacgcccttgcagcagcacatcaaccacacattgcaggttta
gctcctgccgcgtttgtccccaatccatacatcatcagcgctgctcccccagggacggac
ccctatacagctggattggctgcagcagctacactcggcccagctgtggtccctcaccag
tattatggagtcaccccctggggagtctaccctgccagtcttttccagcaacaagctgct
gctgctgctgctgcaaccaattctgctaaccagcagaccaccccacaggctcagcaagga
gggcagcaggttctccgtggcggagcgagtcagcgtcctttgaccccaaatcagaatcag
cagggacagcaaacagatccactagtggcagctgcagctgtaaactctgcccttgctttt
ggacagggtctggctgcaggcatgccaggttacccagtcttggctcctgctgcttactat
gaccaaactggtgctctggtagtgaatgcaggagcaagaaatggcctcggagctcctgtt
cggcttgtggctcctgccccagtcatcattagttcctcggcggcacaagcagctgttgca
gcggccgcagcttcagcaaatggagccgctggtggtcttgctggaacaacaaatggacca
tttcgtcctttaggaacccagcagcctcagccccagccccagcagcagcctggtaacaac
ttggcatccagctctttctatggcaacaactccctgagcagcaactcccagagcagctcc
ctcttctcccagggctctgcccagcctgccaacacgtccttgggatttggaagcagcagc
tcgcttggcgcgaccctgggatcagcccttggagggtttggaaccgcagttgcaaactcc
aacactggcagtggctcccgccgtgactccctgactggcagcagtgacctttataagagg
acatcgagcagcttgacccccattggacacagtttttataacggccttagcttttcctcc
tctcctggacccgtgggcatgcctctccctagtcagggaccaggacattcacagacacca
cctccttccctctcttcacatggatcctcttcaagcttaaacctgggaggactcacaaat
ggcagtggaagatacatctctgctgctcctggtgccgaagccaagtaccgcagtgcaagc
agcgcctccagcctcttcagccccagcagcacccttttctcttcctctcgtttgagatat
ggaatgtctgatgtcatgccctctggcaggagcagactattggaagattttcgaaataac
cggtaccctaatttgcaactgcgggagattgctggacatataatggaattttcccaagac
cagcatgggtcgagattcattcagctgaaactagagcgtgccacagcagctgagcgccag
cttgtgttcaacgaaatcctccaggctgcttaccaacttatggtggatgtatttggaaat
tatgtcatccagaagttctttgaatttggcagccatgaacagaagctggctttggcagaa
cggattcgaggccatgtcctatcactggcactgcagatgtatggctgccgagttatccag
aaagctcttgaatttattccctcagaccagcaggtaattaacgagatggttcgggaacta
gacggccatgtcctcaagtgtgtgaaagatcagaatggcaaccatgtggtccagaagtgc
attgaatgtgtgcagccccagtctttgcagtttatcattgatgcatttaagggacaggta
tttgctttgtccacacatccttatggctgccgcgtgattcagagaatcctggagcactgc
ctccctgaccagaccctccctatcttagaggaacttcaccagcacacagagcagcttgtg
caggatcagtatggaaattatgtaatccaacatgtactggagcatggtcgccctgaagat
aaaagcaaaattgtagcagagatccgaggcaatgtgcttgtattgagtcagcacaaattt
gcaagcaatgttgtggagaagtgtgttacacatgcatcacgtacggagcgtgctgtgctc
atcgatgaggtgtgcaccatgaacgacggtccccacagtgccttatacaccatgatgaag
gaccagtatgccaattacgtggtccagaagatgatcgacgtggcagagccaggccagcgg
aagattgtcatgcataagatccggccccacatcgccactcttcgcaagtacacctatggc
aagcacatcctggccaagctggaaaagtactacatgaagaacggtgtggacttggggccc
atctgtggccccccaaatggtattatctga
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integrated database retrieval system
