Perognathus longimembris pacificus (Pacific pocket mouse): 125354895
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Entry
125354895 CDS
T08928
Symbol
Sfpq
Name
(RefSeq) splicing factor, proline- and glutamine-rich isoform X1
KO
K13219
splicing factor, proline- and glutamine-rich
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
plop01009
]
125354895 (Sfpq)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
plop03021
]
125354895 (Sfpq)
03041 Spliceosome [BR:
plop03041
]
125354895 (Sfpq)
Protein phosphatases and associated proteins [BR:
plop01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
125354895 (Sfpq)
Transcription machinery [BR:
plop03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
125354895 (Sfpq)
Spliceosome [BR:
plop03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
125354895 (Sfpq)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
NOPS
RRM_7
Motif
Other DBs
NCBI-GeneID:
125354895
NCBI-ProteinID:
XP_048206811
LinkDB
All DBs
Position
7:complement(22188078..22205728)
Genome browser
AA seq
701 aa
AA seq
DB search
MSRDRFRSRGGGGGGFHRRGGGGGRGGLHDFRSPPPGMGLNKNRGPMGPGPGGPKPPIPP
PPPHQQPQQPPPQQQPPPQQPPPHQQPPPHQPPHQQPPPPPPDASKPVGPPGPGAAPGVG
SAPPASGSAPPATPPTTGAPPGPGPTPTPPPAVTSAPPGAPPPAPPSSGVPTTPPQAGGP
PPPPAGGPGPVPKQGPGPGGPKGGKMPGGPKPGGGPGLSTPGGHPKPPHRGGGEPRGGRQ
HHPPYHQQHHQGPPPGGPGGRSEEKISDSEGFKANLSLLRRPGEKTYTQRCRLFVGNLPA
DITEDEFKRLFAKYGEPGEVFINKGKGFGFIKLESRALAEIAKAELDDTPMRGRQLRVRF
ATHAAALSVRNLSPYVSNELLEEAFSQFGPIERAVVIVDDRGRSTGKGIVEFASKPAARK
AFERCSEGVFLLTTTPRPVIVEPLEQLDDEDGLPEKLAQKNPMYQKERETPPRFAQHGTF
EYEYSQRWKSLDEMEKQQREQVEKNMKDAKDKLESEMEDAYHEHQANLLRQDLMRRQEEL
RRMEELHNQEMQKRKEMQLRQEEERRRREEEMMIRQREMEEQMRRQREESYSRMGYMDPR
ERDMRMGGGGAMNMGDPYGSGGQKFPPLGGGGGIGYEANPGVPPATMSGSMMGSDMRTER
FGQGGAGPVGGQGPRGMGPGTPAGYGRGREEYEGPNKKPRF
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgggatcggttccggagtcgcggcggtggcggtggcggcttccaccggcgcgga
ggcggcggcggccgtggcggccttcacgacttccgctccccgccgccaggcatgggcctt
aacaagaaccgcggccctatgggcccgggcccaggaggccccaaacctccgatcccgccg
ccgcctccgcaccagcagccacagcagccgccgccccagcaacagccgccgccgcaacag
ccaccgccgcaccagcagccgccaccgcaccagccaccccatcagcagccgccgccgccg
ccgccagacgcctctaaaccggtcggtcctccggggcccggcgccgcgccgggagtaggc
agcgctccgccggcatcggggtcggccccgccggctacccctccgactactggcgctccg
ccagggcccggccccaccccgactccgccgcccgcggtcacctcggcccccccaggggcg
cctccgcccgcgcctccgagcagcggggtcccgaccactcctccacaggccgggggcccg
ccgcctcctcccgcaggaggcccgggtcccgtgcctaagcagggtccaggtcctggcggc
cccaagggcggcaaaatgcctggtgggccgaagcccggcggcggcccaggcctgagcacg
cctggtggccaccccaagcctccacaccgaggcggcggggagccccgtggcggccgccag
caccacccgccctaccaccagcagcaccaccagggcccccctcccggcggacccggcggg
cgcagcgaggaaaagatctccgactcggagggattcaaagccaacttgtctctcttgagg
agacctggtgagaaaacgtacacacagcgctgtcgattgtttgttgggaatctacctgct
gatattacagaagatgagttcaaaagactgtttgctaaatatggagaaccaggagaagtt
tttatcaataaaggcaaaggattcgggtttattaaacttgaatctagagccttggctgaa
attgccaaagctgaacttgatgatacacccatgagaggtagacagcttcgggttcgtttt
gctactcatgctgctgccctttctgtgcgaaatctttcaccctatgtttccaatgaactg
ttggaagaagcctttagccaatttggtcctattgaaagggctgttgtaattgtggatgat
cgtggaagatctacaggaaaaggcattgttgaatttgcttctaagccagcggcaagaaaa
gcatttgaaagatgcagtgaaggtgttttcctactgacaacaactcctcgtccagtcatt
gtggaaccacttgaacaactagatgatgaagatggtcttcctgaaaaacttgcacagaag
aatccaatgtatcaaaaggagagagaaacaccacctcgttttgctcagcatggcacattt
gaatatgaatattctcagcgatggaagtctttggatgaaatggaaaaacaacaaagggaa
caagttgaaaaaaacatgaaggatgcaaaagacaagttggaaagtgaaatggaagatgct
tatcatgaacatcaggcaaatcttttgcgccaagatctgatgagacgccaggaagagtta
agacgaatggaagaacttcacaatcaagaaatgcagaaacgtaaagaaatgcaattaagg
caagaggaggaacggcgtagaagggaagaagagatgatgattcgccaacgggagatggaa
gaacaaatgagacgccaaagagaggaaagttatagccggatgggctatatggacccaaga
gaaagagacatgagaatgggtggtggaggagcaatgaacatgggagatccctatggttca
ggaggccagaaatttccacctctaggtggtggtggtggcataggttatgaagctaaccct
ggcgttccaccagcaaccatgagtggttccatgatgggaagcgacatgcgtactgagcgc
tttgggcagggaggtgcggggcctgtgggtggacagggtcctagaggaatggggcctgga
actccagcaggatatggtagagggagagaagagtatgaaggtccaaacaaaaagccccga
ttttag
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